Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g0666 ATGGAATTATCATTATTCAAGAATAATAATAACACATTGTACCCTCTTATTAGAATTTATGTTTTCCTATTTCAGCTTTCTTTGTTTGCATCCTTGTCCATAGCAGCATATAAAAATGGAGCTTATGTTCCAACAGAAACGGTTTGCAACTCCACCATGTACCCTTCTTACTGCAAATCAGTTCTTGCTAATCAAAACGGCAATATCTATGACTATTGCCGCGTTTCAGTTAAAAAATCTTTATCGCAATCTAGAAAGTTCTTGAACGCCGTCAACTCTTATCTTCAACAAGGTGGAAATTCTTACTCTCAAACCACAATCCGCGCTCTCCAAGATTGCAAATTCCTCGCCGAACTCAACTTGGAGTTCTTGTCAAACACTCTTGACACGGTTCAAAAAGCCGGTGATGTTCTTCCCGCCGGTGAAGCTGATGATTATCACACAGTGCTCAGTGCCGTTTTGACAAACCAACAAACATGTTTGGGTGGATTGCAAACCACGGCTTCTGATCAGAGAGTCAAAGATGAACTTTCTTCTCTGCTCTCAGAGGATACAAAGCTTAACAGCGTCTCTCTTGCTATGTTCGTTGATGCTTGGATTCCTCAGGAGCAAACTACATCGTGGGAAGAAGAAAGTCATGGCCAGCGTGGCAGAAAACTACTAAGCTTGGAAGACATGGAAGATGTTTCTGTGAAAGATATTGTGGTTGTTAGTAAGGATGGAAGTGGAAACTTCACCACTATCAATGAAGCTATAAAGGCTGCACCCAATAACTCGGTTGCTACCGATGGCTATTTCGTCGTCTTCATCACCGAGGGTGTGTATGAAGAGTACGTATCTATAGACAAGAAGAAGAAGTACTTGATGCTGATTGGAGATGGAATCAATCGGACAGTTATCACTGGTGATCACAATGTTGTTGATGGTTTCACAACCTTCAACTCAGCAACATTTGCTGTGGTGGCGGAAGGATTTGTAGCAGTCAACATAACATTCCGCAACAGTGCGGGACCAAGCAAGCACCAAGCAGTGGCAGTGAGAAATGGAGCAGATTTGTCCACCTTCTATGGCTGCAGCTTTGAAGGTTACCAAGACACTCTGTACACACATTCCATGAGGCAATTCTACCGTGAATGCGATGTTTACGGCACAGTTGACTTTATATTTGGAAATGCAGCGGTTGTTTTACAAAACTGCAACTTATATCCCCGCCTTCCAATGAGTGGACAATTCAATGCCATCACGGCTCAAGGCCGAACCGATCCGAACCAAAACACTGGCATTTCCATACAGAACGCAACCATTAAAGCCGCCGACGATTTGGCTCCAGTGGTTGGTAGTGTGTCAACCTACCTTGGGCGGCCGTGGAAGGAGTACTCAAGGACAATTTATATTCAGAGTTTTATGGATAGTTTGATAGCTCCAGTTGGGTGGAGTAATTGGAATGGAGATTTTGCACTCAGCACTTTGTACTATGCTGAGTACAATAACATGGGACCTGGTTCAAGCACTGCTAATAGAGTGAATTGGCCTGGCTATCATGTTATCAATGATATTGATGCAGCTAATTTTACTGTCTCCAAATTCTTGGATGGGGATGCTTGGTTGCCTCCCACTAACGTTCCATTCCAGACATCACTGTAA 1644 0.4307 MELSLFKNNNNTLYPLIRIYVFLFQLSLFASLSIAAYKNGAYVPTETVCNSTMYPSYCKSVLANQNGNIYDYCRVSVKKSLSQSRKFLNAVNSYLQQGGNSYSQTTIRALQDCKFLAELNLEFLSNTLDTVQKAGDVLPAGEADDYHTVLSAVLTNQQTCLGGLQTTASDQRVKDELSSLLSEDTKLNSVSLAMFVDAWIPQEQTTSWEEESHGQRGRKLLSLEDMEDVSVKDIVVVSKDGSGNFTTINEAIKAAPNNSVATDGYFVVFITEGVYEEYVSIDKKKKYLMLIGDGINRTVITGDHNVVDGFTTFNSATFAVVAEGFVAVNITFRNSAGPSKHQAVAVRNGADLSTFYGCSFEGYQDTLYTHSMRQFYRECDVYGTVDFIFGNAAVVLQNCNLYPRLPMSGQFNAITAQGRTDPNQNTGISIQNATIKAADDLAPVVGSVSTYLGRPWKEYSRTIYIQSFMDSLIAPVGWSNWNGDFALSTLYYAEYNNMGPGSSTANRVNWPGYHVINDIDAANFTVSKFLDGDAWLPPTNVPFQTSL* 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g0666 547 TIGRFAM PME_inhib: pectinesterase inhibitor domain 19 193 IPR006501 GO:0004857
Ahy6g0666 547 Gene3D - 228 547 IPR012334 -
Ahy6g0666 547 SUPERFAMILY Pectin lyase-like 232 544 IPR011050 -
Ahy6g0666 547 ProSitePatterns Pectinesterase signature 2. 381 390 IPR033131 -
Ahy6g0666 547 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 47 195 IPR035513 -
Ahy6g0666 547 Pfam Plant invertase/pectin methylesterase inhibitor 46 194 IPR006501 GO:0004857
Ahy6g0666 547 PANTHER PECTINESTERASE 28 546 - -
Ahy6g0666 547 Pfam Pectinesterase 235 533 IPR000070 GO:0030599|GO:0042545
Ahy6g0666 547 Gene3D Invertase/pectin methylesterase inhibitor family protein 45 196 IPR035513 -
Ahy6g0666 547 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 28 546 - -
Ahy6g0666 547 CDD PMEI-like_3 47 195 - -
Ahy6g0666 547 SMART PMEI_2 38 194 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g0666 Ahy-Chr6 8238920 8241029 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g0666 23 547 Carbohydrate Esterase AT4G02330 54.417 0.0 611
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g0666 K01051 - gmx:100792847 796.578
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0642 16 11739724 11742266 Ahy6g0666 6 8238920 8241029 hybridization