Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g0653 ATGTCTAGTGTGGTGGAGTCTAAGAGTGATGGTTGTTATTATTCGGTGCTTGGGGTTCGCAAGCACTCAACCGATCACGAAATTCGTTGCGCTTATCGTAAGATGGCTCTGAAATGGCACCCTGATCGGTGGATCAAAGAACCAAAGCTTGCGGTGGAAGCAAAGAAACAGTTTCAGCATATTCAAGAGGCTTATTCAGTTTTGTCTAATAAAGGGAAGAGAATGATATATGACGCGGGAATGTTTGGTTTTATTGGAGAAGACGATGATGAGGTTTGTTATGGATTTGTTGATTTCATGCAAGAAATGGTCTTGACAATGCAGAAAGTGAAACACCAGGGTGAGAAATGCATGATGGAGGATTTTCAGGGAATACTAATGGATATGATAGCAGAAAGTGATGAAGGGAGTGGCAAATCCGGGTTATGTTGGAGCTCCTCTAATAGTCCTAAGAAAAAGACACGTATCTTATAG 474 0.4156 MSSVVESKSDGCYYSVLGVRKHSTDHEIRCAYRKMALKWHPDRWIKEPKLAVEAKKQFQHIQEAYSVLSNKGKRMIYDAGMFGFIGEDDDEVCYGFVDFMQEMVLTMQKVKHQGEKCMMEDFQGILMDMIAESDEGSGKSGLCWSSSNSPKKKTRIL* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g0653 157 PANTHER PUTATIVE, EXPRESSED-RELATED 5 156 - -
Ahy6g0653 157 SMART dnaj_3 11 73 IPR001623 -
Ahy6g0653 157 Gene3D DnaJ domain 1 84 IPR036869 -
Ahy6g0653 157 MobiDBLite consensus disorder prediction 139 157 - -
Ahy6g0653 157 ProSiteProfiles dnaJ domain profile. 12 81 IPR001623 -
Ahy6g0653 157 SUPERFAMILY Chaperone J-domain 11 84 IPR036869 -
Ahy6g0653 157 MobiDBLite consensus disorder prediction 138 157 - -
Ahy6g0653 157 ProSitePatterns Nt-dnaJ domain signature. 58 77 IPR018253 -
Ahy6g0653 157 Pfam DnaJ domain 13 78 IPR001623 -
Ahy6g0653 157 CDD DnaJ 12 70 IPR001623 -
Ahy6g0653 157 PRINTS DnaJ domain signature 53 73 IPR001623 -
Ahy6g0653 157 PRINTS DnaJ domain signature 32 47 IPR001623 -
Ahy6g0653 157 PRINTS DnaJ domain signature 14 32 IPR001623 -
Ahy6g0653 157 PANTHER DNAJ HOMOLOG SUBFAMILY B MEMBER 6-LIKE 5 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g0653 Ahy-Chr6 8083003 8084436 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g0653 12 79 C2H2 Transcription Factor Family AT1G74250 46.377 2.75e-14 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g0653 - - pvu:PHAVU_001G210400g 214.542
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0662 16 12237910 12239395 Ahy6g0653 6 8083003 8084436 hybridization