LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ahy6g0630	ATGAAATACCCTAATTCTACTCTATCAAGAATGCTCAAAGCTAAATATTTCAGATATACAGATTTTCTACATGCAGAGATAGGAAGCGTATCGTCGGGGGGCTGGAGAAGTGTTCTTGAAGGGCGCAAGGTGATCGAGAAAGGCTTGTTATGGAAAATAGGCTCTGACACGAATGTTCGCATCTTCCATGACCCCTGGCTCCCACCACCAGTGCCCTTTAATGTCCCTCAAAATGCACTCACAATCCCGCCAGATCTGCAAGTGTATTACGTTAGTGCGTTACTATATCCTGATAGAAGCTGGAATAGAAATCTGATTGAGGAGGAGGATGAAGTTAATTGGTGCTGGACAAAATCTGGTATATATGAAGTTGGGTTAAGATACAAAATTGTTTATGGATTCTTTCATTCTTCTACTTCATTGAGGCCCCAGAATATACACAACAGATCAGAAATTGAGGCATTGACAACACTCATACAACCCATGAATTATTCCTCCAAGAATTTAGCAAGATTTATAAATTCATCTCTCAATGCTACCAACATCTCATTCTCTGACATTAAAACCAAGGTCGCTCCATTATTATTTGAATCATTTGAGACGGTTCCTCAATTAGCCCAAATCTCATACATAGGAATGGAAGGTTACTTTTTTTCATTCTACAATGGTGATCATGGTCAACCTCTCGCAATATACTCAAATCGTTCAACATCTTCTTCCATTATTTCTAAGCATTATTATGTTCAGCCGGTGAATCCTGACAATGGAAAATTATATGGGAATGCAACAATATTTGATTCCTATGTTAATACAACTTGGGTTGGGGAAGCATTAAATGGTTCAAATGATGGATTTGTCACATTGGAAAAAAAGCTTAGCAATGATCAAGAATTCTTGTTCATTAGTTCATCAAGAATCACAAAAACAGGTTCAGTGATCTCTCTTGGAGTTCAAGCAACAAAAATAACTGATTTTTTCTTTAGTGTTATTAGTCATCATCAAGGTGCCATGTTGTATCTAGCTACAAAAGATGGACAAGTGCTTCAAGAAGGGATCAAGAATACTCATATGATTGTTTCTAAGAACGACACGGTTTCGTTTCAATATGTGAATAATCACACTAGTTATTATCAGGGTTCAGTTACATGCAAAAATGATGGTGAAGTTGTTGCTTCTACTTTGAAGATTCAGGGTGTTGAGTATTTAATGCGCTGCTCCTCAATTCAGATAATGGGAATCAAATTGGTGTATGTTGTGGGAGTGCCGAAAAATGGAGCAATGATCAGTTTCATAAAGGAATTTAAGAGATATGGGTTGATGGTACTGAGTGCCATGGTGATTATGTCCTTAATTGGCACGATTAGCATTGTAATTATGAAAAAGGCACTAAAGAAGCAAAAAGAAGCAACGGAGGAAGCTGACAGAAAGAGTAAGAATAAGAGCATTGCTTTTGCAACAGCATGCCATGATGTTCGTGCTTCCCTCGCAGCCCTGACTGGTTTGATAGAGTTGTCATCTTCGCAACTTGTCCCTTCTTCATCAGAACTAAACTCCAATCTCAAACAAATGGACTCTTATACCAAAGATTTACTAGGAATGCTGAATTCCATATTGGATGCAAGCAAGATTGAAGCAGGGGAAATGCAACTTGAGGAAGAAGAATTTGATGTGTTCCAATTCCTAGAGGAGGTAGTTGATTCTTACCATAATGTGGCTATGAAGAAAGGAGTAGATATTGTATTGGAACCTTTCAATGACTCAGTTCACAGATATTCACACACAAAGGGTGACAGAGTTAAACTCAAGAGAGTCTTATGCAACTTATTAGACAATGCTGTTAAATTCACTGATGAAGGACACATAGCAGTTAGGGTAAGGGCACAGAAACCTGCATTGCAAAACTCAATGTCAATGATGAGGGTTACTAACCAAAATAGACCTTGGTCATGCTTATTCATCAAAAGAAAAAATAATGAACGACGGAATGATGATGACATAGAAGCTTCTAATTCAACCCAACCAGATCCTAGTAATACCATGGATTTCATATTTGAAGTTGAAGATACTGGCAAAGGAATTCCCAAAGACAAGCATGAGTCTGTGTTTGAGAATTATGTCCAAGTCAAAGAAACTGCTATTGACCATGGTGGAACTGGCTTGGGACTTGGCAGTGTGAGATCTTTGGTTCGATTGATGCATGGAGATATTAGAATTGTGGAGAAGGATAATGGTGGAAAAGGAACATGTTTCAGGTTCAATGTGCACCTCACTGTATGTGATAAAAGAACAGATGATATCACAAGAGAAAGTGAATCTAAACCAGTTGACAGAACTCAATCACACAGGTCAACCATTCATGCTACTAGTTCTGGTTCAAGCATGTGTTCCTTGAGTCCCAAGTTACCTATTTGCGGCCCTAGCACTTTTCGGCATGAGGGATCTCGAGTTGTTCTCTTGATTCAAGGAGAAGAGCGCCGAAGAGCAACACAAAGGTTCATAGAGAGAAAAGGGATCAAAGTTAAGGTTGTTAAGCAGTGGACTAATCTGTCTCATACCCTCAATAAGATAAAAAAGAAGGGTCTGAATAGCTTAAGTTCAGGTTCTAGTTCTAGTTCTGCAACACATGGTTCTACTAATGCCCCTTTGAGTGTTTCGATGGATGAAATTGAATCTACCCAAGGATTCATCCTGATTGTGATTGATGCAAAAGCAGGACCATTTCAAGAACTATGCAGGGTGGTCTCTGAATTCAAGAGAGGCATTTGTGTTTCTTGTAGAGTTGTTTGGTTAGAGAATCCAATTTCTCCTAATCTTGATTTCAATAGCCTAAATGAGGATGATTATGATCCCAATGACATTGTTCTTCATAAACCATTACATGGTACCTCTTTGTTCCAAGTTTTAAGTCTTCTTCCAGAGTATGGTGATGGATCAATGCAAAGAGCTGAACTAGAAAAGTGCGGCACTTCAAGGTCAAGGAGTGGGAAGGAACCACAACAATCCATTGGAGATCAATCTCATGATCAAGGAGGAACAAAAGAGTGTGAAGTTCCAAGAAGCAGTGACAAGCCCTTGAGTGGTAAGAGAATCATGGTGGTTGAAGATGATAACACGATCCGCAAGATAGCTTCTGCTTCTTTGGAACAGCTTGGTGCTTCTGTTGAGAAATGTGAGAATGGTGAACAAGCTGTGGAGCTAGTTAAAGAGGGTCTAGCTAGAGATTTTCCAAATCTTCCATATGATTACATCTTTATGGACTGCCAGATGCCAGTGATGAATGGATATGAGGCAACAAGGCTAATAAGAGAGATAGAGAAAGAGTATAATATTCACATTCCTATATTTGCATTAACTGCTAATACTCAGGAAGAGGCAAATCCATTAGAAGCTGGAATGGACCATCACTTAGTCAAACCCATTGACAAAAAGGGTTTGCTTGAAGCCATCACAAAAGTACACGATAGAGTTGCCATTAGCGAATAG	3483	0.3899	MKYPNSTLSRMLKAKYFRYTDFLHAEIGSVSSGGWRSVLEGRKVIEKGLLWKIGSDTNVRIFHDPWLPPPVPFNVPQNALTIPPDLQVYYVSALLYPDRSWNRNLIEEEDEVNWCWTKSGIYEVGLRYKIVYGFFHSSTSLRPQNIHNRSEIEALTTLIQPMNYSSKNLARFINSSLNATNISFSDIKTKVAPLLFESFETVPQLAQISYIGMEGYFFSFYNGDHGQPLAIYSNRSTSSSIISKHYYVQPVNPDNGKLYGNATIFDSYVNTTWVGEALNGSNDGFVTLEKKLSNDQEFLFISSSRITKTGSVISLGVQATKITDFFFSVISHHQGAMLYLATKDGQVLQEGIKNTHMIVSKNDTVSFQYVNNHTSYYQGSVTCKNDGEVVASTLKIQGVEYLMRCSSIQIMGIKLVYVVGVPKNGAMISFIKEFKRYGLMVLSAMVIMSLIGTISIVIMKKALKKQKEATEEADRKSKNKSIAFATACHDVRASLAALTGLIELSSSQLVPSSSELNSNLKQMDSYTKDLLGMLNSILDASKIEAGEMQLEEEEFDVFQFLEEVVDSYHNVAMKKGVDIVLEPFNDSVHRYSHTKGDRVKLKRVLCNLLDNAVKFTDEGHIAVRVRAQKPALQNSMSMMRVTNQNRPWSCLFIKRKNNERRNDDDIEASNSTQPDPSNTMDFIFEVEDTGKGIPKDKHESVFENYVQVKETAIDHGGTGLGLGSVRSLVRLMHGDIRIVEKDNGGKGTCFRFNVHLTVCDKRTDDITRESESKPVDRTQSHRSTIHATSSGSSMCSLSPKLPICGPSTFRHEGSRVVLLIQGEERRRATQRFIERKGIKVKVVKQWTNLSHTLNKIKKKGLNSLSSGSSSSSATHGSTNAPLSVSMDEIESTQGFILIVIDAKAGPFQELCRVVSEFKRGICVSCRVVWLENPISPNLDFNSLNEDDYDPNDIVLHKPLHGTSLFQVLSLLPEYGDGSMQRAELEKCGTSRSRSGKEPQQSIGDQSHDQGGTKECEVPRSSDKPLSGKRIMVVEDDNTIRKIASASLEQLGASVEKCENGEQAVELVKEGLARDFPNLPYDYIFMDCQMPVMNGYEATRLIREIEKEYNIHIPIFALTANTQEEANPLEAGMDHHLVKPIDKKGLLEAITKVHDRVAISE*	1161

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ahy6g0630	1160	SUPERFAMILY	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase	535	754	IPR036890	-
	Ahy6g0630	1160	CDD	REC_hyHK_CKI1_RcsC-like	1030	1149	-	-
	Ahy6g0630	1160	ProSiteProfiles	Response regulatory domain profile.	1029	1153	IPR001789	GO:0000160
	Ahy6g0630	1160	PANTHER	HISTIDINE KINASE CKI1-LIKE	148	1152	-	-
	Ahy6g0630	1160	PRINTS	Bacterial sensor protein C-terminal signature	682	696	IPR004358	GO:0016310\|GO:0016772
	Ahy6g0630	1160	PRINTS	Bacterial sensor protein C-terminal signature	700	710	IPR004358	GO:0016310\|GO:0016772
	Ahy6g0630	1160	PRINTS	Bacterial sensor protein C-terminal signature	716	734	IPR004358	GO:0016310\|GO:0016772
	Ahy6g0630	1160	PRINTS	Bacterial sensor protein C-terminal signature	742	755	IPR004358	GO:0016310\|GO:0016772
	Ahy6g0630	1160	MobiDBLite	consensus disorder prediction	981	1028	-	-
	Ahy6g0630	1160	PANTHER	TWO-COMPONENT HISTIDINE KINASE	148	1152	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Ahy6g0630	Ahy-Chr6	7704268	7714996	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Ahy6g0630	150	1142	Histidine Kinase Gene Family	AT2G47430	37.164	0.0	604

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Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TR	Others	Ahy6g0630		HATPase_c	2.90E-26	CL0025

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ahy6g0630	-		-	aip:107646610	1890.93

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