Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g0617 ATGGGGATTGGGCCTCTTTCCTCCACACCATTCAATTTCAGTGGATTCCAAGGCGGTTATGATTCTGTTAATATCCATGAAGAGAAGTTTGTGTTACAAGAGAAGCAAGGTTTCTCAGCAGTAATGGAATTAGGTAGAGGAGATAATCTGTTCAAACATCAGCAGCATCATCAACACAAGCATGATCATGATGATGAAGATATCAAAGTTGGTGACATGATCCTACAAGATGTCATCAATTTTGACCCTGATTATGATAGTCTCCAACCAACTTCACAAGAGTTTCAAGAAACAATAGAATTCAAGAATATTCATCAGGCACCGTCGTCTTTGACAATAGCATCGTTGGAGCTCTTGAGAAACTATGGAAGCAAGTTCAAGAAGCTAACCGGGGAAAACATAAGCGATAACTTCAGCAGCGACAACATCGAGAATAGTACTTGTTCGGAGAATCAAAGATTGTCAACTGAAGAAATCATGAGAGTTGCAGGGGCAAGGTATGTGCATTACTCTGCACACTGGAACGATGATTTCTGCATCCCCATGCACCCTTATGGATTGGATCTTGGAAACTTGTCGGAAGAAGAGAACAGAGATGTGGAGCTTGCTCAGTTTCTTCTTGCAGCTGCAGAGAGAGTAGGGTGCCGGCAATTCGAACGTGCCAGCCGCTTACTCCTCCATTGTCAATGGAATTCAGATGTCATCGCAAACGCTGCTCAGAGAGTTATCTTTCACTTCGCCGAAGCGCTTCGCGAAAGGATCAAAAAAGAAACCGGAAGGGTAATGGAAGTTGTAATGTCATCATACTATGATACTCAGAATCAGAATCAGAATGAAGAAACTGAAATGATTCGAAAGATGAGTGTAAATGAGTCTCTTAAGTGCCATCAGAAACTGCCTTTCAATCAAGTAATGCAATTCCCTGGTGTACAAGCTATGGTGGAGAATCTTGCTTTTGAGACCAAGATACACCTGATAGATCTTCAAATCAGAAGCGGAGTGCAGTGTACGGCTCTGATGCAAGCGATGGCGGAGCGGAAAGAGTGTTGTGTGGAGTCTTTTAAGGTAACCGCCATTGGAACTTGCGCAGAGAAGAAGAAAATAGAAGGTACAGGACAAAGGTTAACGAGTTTTGCTGAGTCACTGAACTTGCCGTTTTCATATAAGGCGATTATCGTGACAGATTTGGCAGAAATCAAGTTGGATGATTTCGACGTCGACGACGATGAAGGCGTTGCTGTGTACTCTGCGTATTTTCTTAGGACTCTGGTTTCAAGGCCTAATTGCTTGGAAAATTTGATGCTGGTTATAAGGAATATAAAACCGTCAATTATGATAGTGCTGGAGATAGACTCAAATCATAACTCGCCTTCTTTTGTGAACCGATTCATCGATGCGTTGTTCTACTTTTCAGCATTCATGGATTGTCTTGAAACGTGCCTGAAAGAAGATAGCGAGTGCAGAATGGCGGTGGAAGCAGTGTGTGCCGCGGGGATAAGAAACATTGTCGCTGCTGAAGGCAAAGAAAGGACAGTTAGGAATGTGAAGTTAGATGTTTGGAGAAGGTTCTTCGCGAGGTATAAAATGGTGGAAACAGGGTTCAGTGAATCGTCGCTTTACCAAGCTAACTTGGTTGCTAAGGAGTTTACTTTTGGTAAGTTCTGCAGCGTCGACAAAAATGGTAAGAGTCTAATTGTTTCATGGAAGGGAGCTCCAATGCATTCACTCTCAGCTTGGAAGTTTGTATGA 1749 0.4277 MGIGPLSSTPFNFSGFQGGYDSVNIHEEKFVLQEKQGFSAVMELGRGDNLFKHQQHHQHKHDHDDEDIKVGDMILQDVINFDPDYDSLQPTSQEFQETIEFKNIHQAPSSLTIASLELLRNYGSKFKKLTGENISDNFSSDNIENSTCSENQRLSTEEIMRVAGARYVHYSAHWNDDFCIPMHPYGLDLGNLSEEENRDVELAQFLLAAAERVGCRQFERASRLLLHCQWNSDVIANAAQRVIFHFAEALRERIKKETGRVMEVVMSSYYDTQNQNQNEETEMIRKMSVNESLKCHQKLPFNQVMQFPGVQAMVENLAFETKIHLIDLQIRSGVQCTALMQAMAERKECCVESFKVTAIGTCAEKKKIEGTGQRLTSFAESLNLPFSYKAIIVTDLAEIKLDDFDVDDDEGVAVYSAYFLRTLVSRPNCLENLMLVIRNIKPSIMIVLEIDSNHNSPSFVNRFIDALFYFSAFMDCLETCLKEDSECRMAVEAVCAAGIRNIVAAEGKERTVRNVKLDVWRRFFARYKMVETGFSESSLYQANLVAKEFTFGKFCSVDKNGKSLIVSWKGAPMHSLSAWKFV* 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g0617 582 ProSiteProfiles GRAS family profile. 193 580 IPR005202 -
Ahy6g0617 582 Pfam GRAS domain family 203 580 IPR005202 -
Ahy6g0617 582 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 47 580 - -
Ahy6g0617 582 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 47 580 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g0617 Ahy-Chr6 7608176 7609924 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g0617 192 581 GRAS Transcription Factor Family AT2G01570 28.535 3.80e-46 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Ahy6g0617 GRAS 6.20E-75 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g0617 - - ahf:112695737 1145.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0714 16 13037785 13039530 Ahy6g0617 6 7608176 7609924 hybridization