Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g0615 ATGGACGCCAATGTATCCACTAAACTTGAATCAGAAGAAACTTCTGAGGAGCTCAAATCATCAGAAACTCAGGCATCCAAGAAAAGGAAAATGGTTGAGAAAACTGTTGTGAGGGTGAGGATAGGAGAGGGAAACAATATCAGCAGACTGAAGAATGAAGGGCTACCTTCAGATTTTTGGTCTTGGAGGAAATATGGACAAAAGCCAATCAAAGGGTCTCCATATCCAAGATGCAGCACATCAAAGGGTTGTTCAGCGAAGAAGCAAGTAGAGAGATGCAGAACAGATGCTTCAATGATCATCATCACATACACCTCTACACATAATCACCCTTCTCCTGATGCAATAATCTCCACCCAGAATTTATCACAAAAACCAAAAGAACAAGAAGGTGGAGAAACCACAGAAGAAGAACTCTCAAAGGTGGAAGAACAAGAACAAGAACATGAACATGAACATGAGCATGAACAGGTTGAAGAAGAACACAGCACGGATCATGAGAAGCCAAGTACTACTACTGTGTCTATGGCCACGGCTGATGAGAAGAGTTTCCATTACTTGCAGTCTCCAATAAGCAGCCATGAAGATATTGTTGTTGTAGACCAAGAAGATCCATTCAAGCTAAGCAGTGAGAAAAGCCATGAAAGAATAGATCTTTTGTTAGAAGAGGAAGAGCCACTATGCTATGCACAGATCAAGAACTTGACAACGAAAAAATCAGATGAACTTGATTTCTTCGATGAGCTTGAGGAGTTGCCCATGTCTTCACCTTTCTTGCACTTCACGAGGAGCATTTTATCCGATGAAAGGATTCCCGTTTTTCCTTCTTGA 831 0.414 MDANVSTKLESEETSEELKSSETQASKKRKMVEKTVVRVRIGEGNNISRLKNEGLPSDFWSWRKYGQKPIKGSPYPRCSTSKGCSAKKQVERCRTDASMIIITYTSTHNHPSPDAIISTQNLSQKPKEQEGGETTEEELSKVEEQEQEHEHEHEHEQVEEEHSTDHEKPSTTTVSMATADEKSFHYLQSPISSHEDIVVVDQEDPFKLSSEKSHERIDLLLEEEEPLCYAQIKNLTTKKSDELDFFDELEELPMSSPFLHFTRSILSDERIPVFPS* 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g0615 276 Coils Coil 132 161 - -
Ahy6g0615 276 Gene3D WRKY domain 43 114 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy6g0615 276 Pfam WRKY DNA -binding domain 58 111 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy6g0615 276 MobiDBLite consensus disorder prediction 129 168 - -
Ahy6g0615 276 SMART WRKY_cls 56 112 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy6g0615 276 MobiDBLite consensus disorder prediction 105 174 - -
Ahy6g0615 276 PANTHER WRKY TRANSCRIPTION FACTOR 69-RELATED 14 261 - -
Ahy6g0615 276 MobiDBLite consensus disorder prediction 105 128 - -
Ahy6g0615 276 MobiDBLite consensus disorder prediction 1 31 - -
Ahy6g0615 276 SUPERFAMILY WRKY DNA-binding domain 52 113 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy6g0615 276 ProSiteProfiles WRKY domain profile. 51 113 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy6g0615 276 MobiDBLite consensus disorder prediction 71 90 - -
Ahy6g0615 276 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 14 261 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g0615 Ahy-Chr6 7590679 7592397 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g0615 27 113 WRKY Transcription Factor Family AT2G34830 62.637 5.68e-31 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Ahy6g0615 WRKY 7.90E-18 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g0615 - - adu:107492378 464.536
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0717 16 13067694 13070743 Ahy6g0615 6 7590679 7592397 hybridization