Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g0611 ATGTCGAAGAGGAAGTTCGGATTTGACGGTTTCGGCATAAACCGCCAATCCACCTACAACTTCGAGCGATCCCAAGCTCCTCAGCGCCTCTACGTCCCTCCCTCTTCACGCCACGGCCACGACAATTACGAGGACACCGACCTCGACAACATCGATTACGACGACAACGACGCCGCCGGAAACGACAACAAAGCTGCCGGCGATGGCGGAGGTGGCAATAATGGTGGCGACGAGGAAATCGATCCGCTGGACGCCTTCATGGAAGGGATTCACGAAGAGATGAGGACGGCGGCGCCTCCGAAGCCAAAGGAGAAGGCAGAGGACAGGTACAAGGACGATGAGGAGGATGATCCAATGGAGAGCTTCTTGAGGGCGAAGAAGGACCTAGGGTTGACGTTGGCCTCGGAGGCTCTGCACGCTGGCTACGATTCTGATGAAGAGGTTTATGCTGCTGCTAAGGCTGTGGATGCCGGTATGATAGAGTATGATTCTGATGATAATCCTATAGTTCTTGACAAGAAGAAGATCGAACCCATTCCTCCACTTGATCACAGTTCTATTGACTATGAGCCCTTCAATAAGGATTTCTATGAGGAGGCACCTTCAATTTCAGGTATGAGTGAGCAAGATGTCACTGAGTACCGGAAGAGTTTGGCTATTCGTGTGTCGGGATTTGATGTGCCTAAGCCAATAAAGACATTTGAGGACTGTGGGTTCTCTCAGCAAATTATGGGTGCTATAAAGAAACAAGGTTATGAGAAGCCAACGTCTATACAGTGCCAAGCTTTACCAGTTATTCTTTCCGGTAGAGATATCATTGGCATTGCAAAAACTGGTTCTGGTAAAACTGCTGCTTTTGTGCTTCCTATGATTGTGCATATCATGGATCAGCCTGAACTTCAGAAGGAAGAGGGTCCTATAGGAGTTATATGCGCACCTACAAGAGAATTGGCACATCAGATATATCTTGAGTCCAAGAAATTTGCAAAAGCATATGGTATACGTGTGTCTGCTGTCTATGGTGGAATGTCAAAACTTGAACAGTTCAAAGAACTCAAGGCAGGTTGTGAGATAGTAGTTGCCACCCCTGGGAGATTGATAGACATGCTAAAAATGAAGGCCTTGACAATGACTAGAGCAACTTACCTGGTGCTTGATGAGGCTGACCGGATGTTTGATCTTGGATTTGAGCCACAAGTAAGGTCCATTGTTGGTCAGATTAGGCCGGATCGTCAGACTTTACTTTTTTCTGCGACAATGCCTCGTAAAGTTGAAAAGTTGGCTAGAGAGATCCTTAGTGATCCTGTTAGAGTAACAGTTGGGGAGGTGGGAATGGCAAATGAAGACATTACTCAAGTTGTCCATGTAATTCCTTCTGATGCTGAAAAATTGCCTTGGCTTTTGGAGAAGTTGCCCGAGATGATCGATCAAGGTGATGTCCTAGTATTTGCTTCCAAGAAGGCTACTGTGGATGAAATTGAATCACAATTGGCTCAGAGAGGCTTTAAAGTTGCTGCCCTGCATGGTGATAAAGATCAAGCTTCTCGCATGGAAACTTTGCAGAAGTTTAAAGCTGGTGTCTACCATGTGCTTATTGCAACTGATGTTGCTGCTCGTGGTCTTGATATCAAGTCAATTAAATCTGTGGTAAACTTTGATATTGCAAAAGATATGGATATGCATGTCCATCGGATTGGGAGAACAGGCCGTGCTGGTGACAAGGATGGGGTTGCATACACTCTTATAACTCAAAAAGAAGCACGCTTTGCTGGCGAACTGGTGAATAGCTTGATTGCTGCTGGTCAGAATGTATCCATGGAGTTGATGGATCTTGCTATGAAGGATGGGAGGTTCAGGTCAAAACGTGATGCAAGAAAAGGAGGTGGGAAAAAAGGCAAAGGGAGAGGAGGAGGTGGTGGTGGTGGCGGTGGCGGCCGGGGTGTGCGTGGAGTTGATTTTGGCCTTGGTATTGGATATAATCCCGAGTCCAACAATGCTTCATCTAACACCCCTCCGAGCCGCTCTGCTGCTGTAAATTCTTTACGAACAGGAATGATGTCACAGTTTCGGAGTAGCTTTGTTGCTGCTTCCTCTAACTCCCAAAATCAAGGATACAATAACAATACAAGTATGGCTGCAAATAAGAGACCTGCACTTCGCGGTTTTGTATCTGGTGGATCAATTGGCGGGGATATAAATTCTCATAATAATGCTGCTTCACCCAGTCCTGCTACAGCAGCAGTAAACTCCGGTGGCCCAAATTCCGGTGTAAACCCTGCTCAGAACAACTCAAACAGCTCTAAACCCAGAGAAAGGAGGAGGCCATCAGGCTGGGATAGGTAG 2343 0.4669 MSKRKFGFDGFGINRQSTYNFERSQAPQRLYVPPSSRHGHDNYEDTDLDNIDYDDNDAAGNDNKAAGDGGGGNNGGDEEIDPLDAFMEGIHEEMRTAAPPKPKEKAEDRYKDDEEDDPMESFLRAKKDLGLTLASEALHAGYDSDEEVYAAAKAVDAGMIEYDSDDNPIVLDKKKIEPIPPLDHSSIDYEPFNKDFYEEAPSISGMSEQDVTEYRKSLAIRVSGFDVPKPIKTFEDCGFSQQIMGAIKKQGYEKPTSIQCQALPVILSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELQKEEGPIGVICAPTRELAHQIYLESKKFAKAYGIRVSAVYGGMSKLEQFKELKAGCEIVVATPGRLIDMLKMKALTMTRATYLVLDEADRMFDLGFEPQVRSIVGQIRPDRQTLLFSATMPRKVEKLAREILSDPVRVTVGEVGMANEDITQVVHVIPSDAEKLPWLLEKLPEMIDQGDVLVFASKKATVDEIESQLAQRGFKVAALHGDKDQASRMETLQKFKAGVYHVLIATDVAARGLDIKSIKSVVNFDIAKDMDMHVHRIGRTGRAGDKDGVAYTLITQKEARFAGELVNSLIAAGQNVSMELMDLAMKDGRFRSKRDARKGGGKKGKGRGGGGGGGGGGRGVRGVDFGLGIGYNPESNNASSNTPPSRSAAVNSLRTGMMSQFRSSFVAASSNSQNQGYNNNTSMAANKRPALRGFVSGGSIGGDINSHNNAASPSPATAAVNSGGPNSGVNPAQNNSNSSKPRERRRPSGWDR* 781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g0611 780 Gene3D - 195 439 IPR027417 -
Ahy6g0611 780 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 263 438 IPR014001 -
Ahy6g0611 780 MobiDBLite consensus disorder prediction 729 766 - -
Ahy6g0611 780 Pfam Helicase conserved C-terminal domain 468 572 IPR001650 -
Ahy6g0611 780 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 24 45 664 - -
Ahy6g0611 780 SMART helicmild6 491 572 IPR001650 -
Ahy6g0611 780 Gene3D - 440 616 IPR027417 -
Ahy6g0611 780 MobiDBLite consensus disorder prediction 93 117 - -
Ahy6g0611 780 CDD DEADc_DDX42 243 439 - -
Ahy6g0611 780 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 463 612 IPR001650 -
Ahy6g0611 780 MobiDBLite consensus disorder prediction 723 780 - -
Ahy6g0611 780 SMART ultradead3 251 453 IPR014001 -
Ahy6g0611 780 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 379 610 IPR027417 -
Ahy6g0611 780 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 232 260 IPR014014 GO:0003724
Ahy6g0611 780 Pfam DEAD/DEAH box helicase 256 427 IPR011545 GO:0003676|GO:0005524
Ahy6g0611 780 MobiDBLite consensus disorder prediction 13 31 - -
Ahy6g0611 780 MobiDBLite consensus disorder prediction 617 677 - -
Ahy6g0611 780 CDD SF2_C_DEAD 450 582 - -
Ahy6g0611 780 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 215 441 IPR027417 -
Ahy6g0611 780 MobiDBLite consensus disorder prediction 660 677 - -
Ahy6g0611 780 MobiDBLite consensus disorder prediction 1 81 - -
Ahy6g0611 780 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 45 664 - -
Ahy6g0611 780 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 384 392 IPR000629 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g0611 Ahy-Chr6 7528670 7532704 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g0611 232 588 Eukaryotic Initiation Factors Gene Family AT3G13920 35.000 9.42e-62 212
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g0611 K12835 - gmx:100814854 1290.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0726 16 13211849 13215786 Ahy6g0611 6 7528670 7532704 hybridization