Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g0608 ATGCAGGTTCCTAAATTCTTTTTCTTCAAGGTTTCAATGCTAATAATTGGTCTTACAAGTGTTTGTAAATGCGAGGATTGTAGGAAACCACCGAAGACGATTACTGTTAGTCAATCAGGAAATGCAAACTTCAAAACAGTTCAAAGTGCCATTGATTCTGTCCCCTCAGGAAACTCTCAATGGGTTCATATCCAAATTTCCCCAGGCGTTTACAGAGAAAAGGTGGTAATTGAGAGCGACAAACCTTGCATATATCTTAAAGGAGGCGGCGGGGGTTCCACCAGTATTGAATGGAATGACCACGGCAATGCACATTTCACTGCTACTTTCAACATTAAAGCATCTAACATTGTTGCAAACGCCATTGCCTTCAAGAACACATATAACACTGTAGACACAGGCAAGGTGGTTCAAGCAGTAGCAGCAAGGGTTCATGAAGACAAAATTGCTTTCTACGATTGTCAATTTATAGGGGTACAAGATACCCTGTTCGATTCATATGGCCGCCATTACTATAAGGGTTGTTACATTCAGGGTGGAGTTGACTTCATCTTTGGGAGTGCTCAATCAATGTTTGAGGGAAGCACGCTATCTTTCTCAATGGGACTTGGTCCCAAAGTAGATGGGGTTTTCACAGCAAACGAAAGGGAAGAAGATGACAACAGCGGCTATGTGTTCAAGAATTGCAACATAACTGGAACTGGAGGAAAAGCCATTCTTGGAAGATCTTTGAATGCTTATGGCAGAGTTATTGTTGCCAATTCTGTGCTTTCAGATGTCGTTAGACCAGAGGGTTGGGAATCTTTGCACCACAATGTGTAA 822 0.4197 MQVPKFFFFKVSMLIIGLTSVCKCEDCRKPPKTITVSQSGNANFKTVQSAIDSVPSGNSQWVHIQISPGVYREKVVIESDKPCIYLKGGGGGSTSIEWNDHGNAHFTATFNIKASNIVANAIAFKNTYNTVDTGKVVQAVAARVHEDKIAFYDCQFIGVQDTLFDSYGRHYYKGCYIQGGVDFIFGSAQSMFEGSTLSFSMGLGPKVDGVFTANEREEDDNSGYVFKNCNITGTGGKAILGRSLNAYGRVIVANSVLSDVVRPEGWESLHHNV* 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g0608 273 Gene3D - 19 273 IPR012334 -
Ahy6g0608 273 SUPERFAMILY Pectin lyase-like 30 272 IPR011050 -
Ahy6g0608 273 PANTHER PECTINESTERASE 7 269 - -
Ahy6g0608 273 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 7 269 - -
Ahy6g0608 273 Pfam Pectinesterase 34 269 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g0608 Ahy-Chr6 7508831 7510351 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g0608 6 268 Carbohydrate Esterase AT2G19150 45.725 5.80e-70 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g0608 - - adu:107492287 556.599