Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g0592 ATGGAAGCTAATAAGAAGAATAAGGTAAAGAAATTAGGATCAGGCAGTATAGAAGAAGAAGAAGAGGAGAATGATAAAGGTATGATAAGAAAAGGTCCATGGAGCGTTGAAGAAGACGTGATTCTGAGCAATTACGTGGCCACTCACGGTCATGGTCGCTGGAACACCCTCGCCCGTTCTGCAGGCCTTAAGAGGTCCGGGAAAAGTTGCAGGTTGAGATGGCTAAACTATCTTCGTCCTGATGTTCGCCGCGGAAACATCACACTCCACGAACAAATCACCATTCTTGATCTTCATTCACGCTGGGGAAATAGATGGTCGAAAATTGCGGAGCACTTGCCAGGAAGAACGGACAATGAGATAAAGAATTATTGGAGGACCAGAGTGAGTAAGCAGGCAAGGCAACTCAACTGTGACGTCAATAGCAAAATATTCAGGGACGCTTTGCGTTATGTTTGGATGCCTCTTTTGCAAGAGCGACTTCAATCGAACACGCAAATGGAGCATCCAAACGCAGCACAAACCTACTCCTCGGACTCATCATCATCAGCATCCCTTGGCATACAACAATTCTGTTCTGAATCTGATCAACAAGTGATGAGTAATCATGGTGTTTTGGTGCATAGTATTGTTGAAGATGAGCCCGGAATATGCCCGAGTATGAATAACGAAACGTTTGAATATACCAATATACCCTTGGGGGATAGTGGGGACTTAATGCTGGAGAGTTTGTGCAACAACGATGACAACATATATGGCTTCTGTCACGACTTTGTCATGACCTTGGAATAA 792 0.4432 MEANKKNKVKKLGSGSIEEEEEENDKGMIRKGPWSVEEDVILSNYVATHGHGRWNTLARSAGLKRSGKSCRLRWLNYLRPDVRRGNITLHEQITILDLHSRWGNRWSKIAEHLPGRTDNEIKNYWRTRVSKQARQLNCDVNSKIFRDALRYVWMPLLQERLQSNTQMEHPNAAQTYSSDSSSSASLGIQQFCSESDQQVMSNHGVLVHSIVEDEPGICPSMNNETFEYTNIPLGDSGDLMLESLCNNDDNIYGFCHDFVMTLE* 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g0592 263 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 15 214 IPR044676 GO:0003700|GO:0006355|GO:0043565
Ahy6g0592 263 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 26 78 IPR017930 -
Ahy6g0592 263 Pfam Myb-like DNA-binding domain 31 78 IPR001005 -
Ahy6g0592 263 Pfam Myb-like DNA-binding domain 84 127 IPR001005 -
Ahy6g0592 263 Gene3D - 31 83 - -
Ahy6g0592 263 ProSiteProfiles Myb-like domain profile. 26 78 IPR001005 -
Ahy6g0592 263 SMART sant 30 80 IPR001005 -
Ahy6g0592 263 SMART sant 83 131 IPR001005 -
Ahy6g0592 263 ProSiteProfiles Myb-like domain profile. 79 129 IPR001005 -
Ahy6g0592 263 PANTHER MYB TRANSCRIPTION FACTOR 15 214 - -
Ahy6g0592 263 CDD SANT 88 127 IPR001005 -
Ahy6g0592 263 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 79 133 IPR017930 -
Ahy6g0592 263 SUPERFAMILY Homeodomain-like 30 125 IPR009057 -
Ahy6g0592 263 CDD SANT 33 78 IPR001005 -
Ahy6g0592 263 MobiDBLite consensus disorder prediction 1 29 - -
Ahy6g0592 263 Gene3D - 88 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g0592 Ahy-Chr6 7287009 7288414 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g0592 10 200 MYB Transcription Factor Family AT2G47190 55.838 1.52e-73 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Ahy6g0592 Myb_DNA-binding 4.80E-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g0592 K09422 - gmx:100797220 260.766
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy6g0592 6 7287009 7288414 Ahy19g1220 19 23244406 23245975 PCT
Ahy6g0592 6 7287009 7288414 Ahy9g0952 9 18401033 18402592 PCT
Ahy19g1220 19 23244406 23245975 Ahy6g0592 6 7287009 7288414 PCT
Ahy9g0952 9 18401033 18402592 Ahy6g0592 6 7287009 7288414 PCT