Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g0575 ATGGCATATTTTAGTGTTGTCTCAAATCATGGTAGTTATAGAGCAACTTCCCATGAATTCAAATTGGTTTTCCTTCACCGAACCACTGTTGTAGCTGTTGATGAAGATGTTATCCCTAAGACTTGTTTCAACATGTTTCCTTTTTCTGAGCTGCTGAACATGACCCAAGATTATGATTTTTTAGTTGATGTCATTGGACTTTTAACTTCAGTTGGAGAAGAGAAAGAATATGCAAGAGAAGGAAAAATTGTGAAAATGATTGCATTGGAATTAACTTCAAAAGATCTTACAGTGCGATGTGCATTGTTTGGGGATTATGTTAATCAAGTAAATCATTTCCTTGCCTTTGGGTATGTGGAGCAGTCTGTTGTAGTTATTCAACTTGCAAAAGTCAAGTTCTTTCGGGGTCAAGTAGGTCTTCAAAATGTGATGTATGCGACACAAATGTTATTTAATCCTGATATTCCTGAAGTTGTTGAATTCAGGCAGAGTATGATTGAGCAAGGTGTCAGTGGTACCCAGCCACTGTTTATTGCAAATGAGGGTAAAGTTCTCTCCTTGGAAGATGATTTCATGCGTCTAACTAGAAAATGCACTATTGAAGAGCTTCAAGATAACAATCAGGAGGGTTCTTTTATCATTTTTGGAGCAATCCAAGGTATTGTTGAGGATGGAGGTTGGTGGTATTCTGCTTGTGTGTGTGGAAAGGGTATCTATCCTCAAAATGGTGCCTATTACTGTGATTTTTGTTTGTAG 756 0.3743 MAYFSVVSNHGSYRATSHEFKLVFLHRTTVVAVDEDVIPKTCFNMFPFSELLNMTQDYDFLVDVIGLLTSVGEEKEYAREGKIVKMIALELTSKDLTVRCALFGDYVNQVNHFLAFGYVEQSVVVIQLAKVKFFRGQVGLQNVMYATQMLFNPDIPEVVEFRQSMIEQGVSGTQPLFIANEGKVLSLEDDFMRLTRKCTIEELQDNNQEGSFIIFGAIQGIVEDGGWWYSACVCGKGIYPQNGAYYCDFCL* 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g0575 251 PANTHER REPLICATION FACTOR A 1, RFA1 8 250 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Ahy6g0575 251 Gene3D - 37 173 IPR012340 -
Ahy6g0575 251 PANTHER ANIMAL RPA1 DOMAIN PROTEIN 8 250 - -
Ahy6g0575 251 SUPERFAMILY Nucleic acid-binding proteins 43 165 IPR012340 -
Ahy6g0575 251 Pfam Domain of unknown function DUF223 3 58 IPR003871 -
Ahy6g0575 251 CDD RPA1_DBD_B_like 63 166 - -
Ahy6g0575 251 Gene3D - 188 251 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g0575 Ahy-Chr6 6984554 6989086 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g0575 23 250 Core DNA Replication Machinery Family AT2G06510 25.101 1.56e-08 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g0575 - - adu:107471135 504.212