Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g0546 ATGGATAACCCACACCCCCGTGAATTGACTTTCTTACCCTCTAGGGACGTCAAAGAAGTGGATTTCTTCTCATCATCATCATCAACTGCTGCCGATCAAGATCATACTACTCATCATCATGCTTCATCCTTCCCTCATCACCCTGTAAACACTGGGCTGAACTTAACGTGTGAAACTACTGGAATTTCAACTTCAAAGGGATCACCTAATGCCGATAATACTGAATCCGAGAGGAAAATGGTGGAAGGTGAATTACGGAGACTGCAAGAAGAGAATCGAAAGCTGAGAAGTATGGTGGATCAGATCGCCAAAAGCTATAGCCAACTTCAGGCACAGCTCTTCATGGCTTTGCAGAAACAAAAGCTTACTCATCATCATCAGAATACTGGTGTTAAGAGCAATGGGATGATAAGTGGAGAAAAAGCTGTGGAGGGAGATGGAAGGGCGAAAGTAGAGATGAAGAATAACGATGCTTCGGTATCCGGTGATGAAAAGAGAGAAAGAGAGGTATCAGCATCAAACAATAATGGTAATAATGCAGAGGAGGTAATGTCAAAGAAGCATGATGAGAATGATGATGATAACGAAGGTGATGAAGATGGTTTGACTAAGCTTCATTTGGGAAAACAAGTAGCAGCATCTGCTACAGAAGAAGACGTCCTTGAGCGATCTTCTTCTCAGAGTTGGGGATCATGCAAGACTCCCAACTTAGAAGAACCCAAGCTTCCTTCTTCTGACCTTCCTTTCAGGAAAGCCAGGGTTTCAGTTCGCGCAAGATCAGAAGCTCCTCTGATTAGCGATGGATGCCAGTGGAGGAAATACGGACAAAAAATGGCTAAGGGTAACCCCAGTCCTCGAGCCTACTATCGGTGCACCATGGCTGCTGGATGCCCAGTTCGGAAGCAGGTTCAAAGATGCGCAGAGGACAGTACAGTCCTAATAACAACCTATGAAGGTAACCACAACCACCCTCTTCCGCCGGCAGCCACCGCCATGGCCAACACGACTTCAGCCGCAGCAGCCATGCTACTATCAGGATCAACCTCATCATCGTCCAAAGAAACCCTAGCAACTTCAGCAGCAGGAGGATACTTCTCTTCATCAATGCCCTACACATCAATGGCGACGCTATCAGCTTCCGCGCCATTTCCCACCATCACTCTCGACCTCACACACAACCACCACAACGCACTCCAACTCCACCGTGTGGTCCCTCCTCCCGGTGTTACCTTCCCTCTCCCATTGCATGCAGTTACTCCTCCACATCAGCTTATAGCAGGGCACCCGTTCTTAATCTCTAACCACCAGAAGTTGATGCCTCCTTTGGTTCATCGACAACAACCACAGCCTTCTAATAATTCCCCGTCTATGGTGGAGACAGTGAGTGCAGCCATTGCTTCGGATCCAAACTTCACTGCGGCCGTGGCTGCGGCACTCTCATCAATCATTGGAAGCAGTAGCAATGGTGGAAGTGCTATTTCTGTGTCACCGAATGGGTCACCGCAACTTCCTCAGTCATGTACTACCTACTCTACCAACTAG 1542 0.478 MDNPHPRELTFLPSRDVKEVDFFSSSSSTAADQDHTTHHHASSFPHHPVNTGLNLTCETTGISTSKGSPNADNTESERKMVEGELRRLQEENRKLRSMVDQIAKSYSQLQAQLFMALQKQKLTHHHQNTGVKSNGMISGEKAVEGDGRAKVEMKNNDASVSGDEKREREVSASNNNGNNAEEVMSKKHDENDDDNEGDEDGLTKLHLGKQVAASATEEDVLERSSSQSWGSCKTPNLEEPKLPSSDLPFRKARVSVRARSEAPLISDGCQWRKYGQKMAKGNPSPRAYYRCTMAAGCPVRKQVQRCAEDSTVLITTYEGNHNHPLPPAATAMANTTSAAAAMLLSGSTSSSSKETLATSAAGGYFSSSMPYTSMATLSASAPFPTITLDLTHNHHNALQLHRVVPPPGVTFPLPLHAVTPPHQLIAGHPFLISNHQKLMPPLVHRQQPQPSNNSPSMVETVSAAIASDPNFTAAVAAALSSIIGSSSNGGSAISVSPNGSPQLPQSCTTYSTN* 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g0546 513 MobiDBLite consensus disorder prediction 219 234 - -
Ahy6g0546 513 Coils Coil 71 105 - -
Ahy6g0546 513 ProSiteProfiles WRKY domain profile. 260 326 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy6g0546 513 Pfam WRKY DNA -binding domain 267 324 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy6g0546 513 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 14 512 IPR044810 GO:0003700
Ahy6g0546 513 SMART WRKY_cls 265 325 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy6g0546 513 Gene3D WRKY domain 250 327 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy6g0546 513 SUPERFAMILY WRKY DNA-binding domain 258 326 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy6g0546 513 MobiDBLite consensus disorder prediction 144 171 - -
Ahy6g0546 513 MobiDBLite consensus disorder prediction 23 52 - -
Ahy6g0546 513 MobiDBLite consensus disorder prediction 144 245 - -
Ahy6g0546 513 MobiDBLite consensus disorder prediction 59 78 - -
Ahy6g0546 513 PANTHER WRKY TRANSCRIPTION FACTOR 47-RELATED 14 512 - -
Ahy6g0546 513 MobiDBLite consensus disorder prediction 490 513 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g0546 Ahy-Chr6 6719257 6722264 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g0546 74 483 WRKY Transcription Factor Family AT4G04450 40.330 8.34e-80 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Ahy6g0546 WRKY 7.80E-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g0546 - - gmx:100783661 449.514
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0794 16 14216173 14217899 Ahy6g0546 6 6719257 6722264 hybridization