Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g0537 ATGAGAATGAAGGTGTTTGTGATAGCCGCACTTGCTTTTGTGTCTCTAGTTTCCGTCATTGATGGATCTGAGCATCAGGCTCAGCTATCTGAGTTTGTAAACGATGCTTTATTCTCATCAGTTTCAAGCAAGCAGCTTTCCCAGCCACAACCTCTCATGGTGCCCATTACTGTTATCAATGGAGCTGCTGCCAAAGGAGCTGTATGTTTGGATGGAACATCGCCTGCCTATCACTTTCATCCTGGATCCGGATCAGGAGCCAATAGTTGGCTCATTCACTTAGAGGGAGGAGGATGGTGTAATACCATCAGAAATTGTGTTTTTAGGAAGACGACTCGGCGTGGTTCCTTTAAATTCATGGAAAAGACACTGCCATTCACGGGGATATTGAGCAATAAACCTGAAGAAAACCCTGATTTCTTTAACTGGAACAGAGTTAAAATTCGTTACTGTGATGGAGCATCTTTCGCCGGAGACAGTCAAAATGAGGCTAATCAGCTTCAATTTCGAGGACAAAAAATATGGCTAGCTGCAATCGAGGAATTAATGTCCAAAGGAATGCAAAAAGCCAACCAGGCACTTTTGTCTGGATGCTCTGCAGGTGGTCTAGCATCTATAATACATTGTGATGAATTCGGAAGCATGTTTCCAAAATCTACCAAAGTGAAATGTTTGAGTGATGCAGGATTTTTTCTTGATGCAGTTGATGTGTCTGGGGGGCACACACTGAGGAATATGTTTGGAGGTGTAGTTACATTACAGGAAGTACAAAAAAACTTACCAAAAAGTTGTCTCAACCAACTGGATCCAACTTCGTGCTTCTTTCCTCAAAACTTGATCCAGCATGTTCAAACTCCATTGTTTCTTCTCAATGCAGCTTATGATGCATGGCAGGTGCAAGAAAGTCTAGCCCCCCATTCAGCAGATCCAAGTGGTTCTTGGAATGATTGTAAAGCAAATCATGCAAGGTGTAACTCATCTCAAATACAGTTCTTCCAAGACTTCAGAAATCAACTGCTAAATGATGTGAAAGACTTCTCAAAGTCATCTCCAACTGGATTGTTCATAAATTCTTGTTTTGCTCACTGCCAGTCTGAGAGACAAGATACATGGTTTGCTGATGACTCTCCGCTTATTAACGACATGCCTGTGGCGATTGCTGTTGGAGACTGGTTTTTTGATCGAAAAACTATCAAAGCTATTGATTGTGCTTATCCCTGTGACACAACCTGCCATAATCTGGTCTTCAATGTTGGTAGATCTACCGTGGTTGGCTCCCAGTATATAAGTGAAAGTGATGACACATCCACCACCACCACCATGATATATTCCTCTCAGTCCTCCAGGTTGACTTTTCCTGCTCTATACCTACTAAGTGCTTTGTTTCCCACTTCCATGTTCCTACTGCACCTTAGAGTAGAAGTACTATCAAGATTCTTTAGCCATTCCACATAA 1455 0.422 MRMKVFVIAALAFVSLVSVIDGSEHQAQLSEFVNDALFSSVSSKQLSQPQPLMVPITVINGAAAKGAVCLDGTSPAYHFHPGSGSGANSWLIHLEGGGWCNTIRNCVFRKTTRRGSFKFMEKTLPFTGILSNKPEENPDFFNWNRVKIRYCDGASFAGDSQNEANQLQFRGQKIWLAAIEELMSKGMQKANQALLSGCSAGGLASIIHCDEFGSMFPKSTKVKCLSDAGFFLDAVDVSGGHTLRNMFGGVVTLQEVQKNLPKSCLNQLDPTSCFFPQNLIQHVQTPLFLLNAAYDAWQVQESLAPHSADPSGSWNDCKANHARCNSSQIQFFQDFRNQLLNDVKDFSKSSPTGLFINSCFAHCQSERQDTWFADDSPLINDMPVAIAVGDWFFDRKTIKAIDCAYPCDTTCHNLVFNVGRSTVVGSQYISESDDTSTTTTMIYSSQSSRLTFPALYLLSALFPTSMFLLHLRVEVLSRFFSHST* 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g0537 484 Pfam Pectinacetylesterase 48 397 IPR004963 GO:0016787
Ahy6g0537 484 PANTHER NOTUM-RELATED 3 433 IPR004963 GO:0016787
Ahy6g0537 484 PANTHER PECTIN ACETYLESTERASE 3 433 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g0537 Ahy-Chr6 6573313 6577632 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g0537 47 417 Carbohydrate Esterase AT2G46930 71.968 0.0 591
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g0537 K19882 - gmx:100785270 733.021
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0807 16 14417966 14422556 Ahy6g0537 6 6573313 6577632 hybridization
Ahy6g0537 6 6573313 6577632 Ahy19g1285 19 25884000 25888282 PCT
Ahy6g0537 6 6573313 6577632 Ahy9g1013 9 20117976 20121967 PCT
Ahy19g1285 19 25884000 25888282 Ahy6g0537 6 6573313 6577632 PCT
Ahy9g1013 9 20117976 20121967 Ahy6g0537 6 6573313 6577632 PCT