Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Ahy6g0518 | ATGTCGTCGTCGAGGCGAAGCCAATCATCGAGCAATTCAAGCAGATCAAGACAGAGTGCAAGAGTAATTGCTCAGACAAGTGTGGATGCAAAGCTGCATGCAAACTTTGAGGAGTCCGGAAGTTCATTCGACTACTCCAATTCGGTGCGGTTGTCTTCCGGTACAGTCAGTGGAGAAAACCAGGCAAGATGTGACAGAGTTACAGCAGCTTATCTTCATCAAATGCAGAAGGGGAAGTTCATCCAGCCCTTTGGGTGCTTGCTAGCTTTGGATGACAAGACACTTAGGGTCATTGCATACAGTCACAATGCATCTGAAATGCTTACCATGGTCAGCCATGCTGTTCCAAGTGTTGGTGATCACACTGCTCTTGCCATTGGCACCGACATTCGGACTATTTTCACGCCCTCAAGTGCTGCTGCTTTGCAAAAGGCCCTTGCAGTTCCGGAGGTTTCGCTTCTTAACCCCATTCTAGTTCATTGCAAGACTTCTGGCAAGCCCTTCTATGCAATTGTTCATCGTATTACCGCTACTTTGATCATTGATTTTGAGCCTGTTAAGCCTCATGAAGTTCCTATGACTGCCGCCGGAGCCCTGCAATCTTACAAGCTTGCGGCCAAAGCAATAACTAGATTGCAGTCTTTGCCCAGTGGGAGCATGGAAACGCTTTGTGACACCATGGTTCAAGAAGTTTTTGAGCTCACGGGTTATGACAGGGTGATGGCTTATAAATTTCATGAGGATGATCATGGGGAAGTGATTGCTGAGGTTGCAAAGCCAGGTCTTGAGCCATATCTGGGTTTGCACTATCCAGCCACTGATATTCCCCAGGCTGCGCGCTTCTTGTTTATGAAGAACAAGGTCCGAATGATAGTTGATTGTCGTGCAAAGCATGTGAAGGTGCTTCAAGACCCCAAAGTTTCCATTGATTTAACTTTGTGCGGTTCAACTTTAAGGGCTGCTCATAGTTGTCACTTGCAATATATGGAAAATATGAATTCAATTGCTTCCCTGGTTATGGCAGTTGTGGTCAATGATAACGATGAAGATGGGGATGGCTCTGATGTTGTTCAGCCACAAAAGAGAAAGAGACTTTGGGGTTTAGTAGTTTGCCATAACACTACTCCAAGGTTTGTTCCCTTTCCTCTAAGGTATGCTTGTGAGTTTTTGGCTCAAGTATTTGCCATCCATGTGAATAAGGAATTAGAGTTAGAATATCAGATTGTTGAGAAGAATATCCTGCGCACGCAGACACTCTTGTGCGATATGCTGATGCGAGATGCACCCCTTGGTATTGTATCACAGAGCCCTAATATAATGGATCTTGTGAGATGTGATGGAGCAGCACTCTTGTATAGAGACAAGGTATGGAGATTAGGTGTGGCTCCAAGTGAATCTCACATAAGAGAGTTAGCTTTATGGCTCTCTAAGTGCCACAAGGACTCCACGGGTTTGAGTACAGATAGCTTGTCTGATGCAGGCTTCCCAGGAGCTGCTGCTCTTGGTGATGTTGTTTGTGGAATGGCAGCTGTGAGAATTTCTTCCATGGACATAGTTTTCTGGTTTAGATCACACACTGCTGCAGAAATCAGATGGGGTGGTGCCAAGCATGAACCTGGTGACAGGGATGATCCTACAAAGATGAGTCCAAGATCATCATTCAAGGCTTTCCTTGAAGTTGTGAAGGGAAGGAGCTTACCATGGAAGGACTACGAAATGGATGCTATCCATTCATTGCAGCTAATACTGAGAAATTCATTCAAAGATAATGAGATTATGGATATAAGCACGCAAGCTATTGATACAAGACTAAATGATTTGAAGATTGAAGGGATGCAAGAATTAGAAGCAGTGACGAGTGAGATGGTTCGATTAATTGAAACAGCATCAGTGCCAATTTTGGCAGTTAATGTTGATGGGATGGTCAATGGATGGAACACGAAGATTGCTGAGTTGACAGGCCTTTCAGTTGAGGAAGCTATTGGAAAGGATTTACTTACGCTGGTTGAGGATTTTTCAGCAGAGAGAGTCAAGAAGATGCTGGACATGGCACTGCAGGGTAAAGAAGAGAAGAATTTCCAATTTGAGATCAAAACACATGGTGTGAAGATTGATTCAGGTCCTATCAGCTTGGTAGTTAATGCTTGTGCAAGCAGGAATCTCCAAAACAGCGTGGTGGGAGTTTGTTTTGTGGCCCATGATATGACTGCTGAGAAGACAGTCATGGACAAATTCACTCGAATTGAAGGTGACTATAGGGCGATTGTACAGAATCCGAACCCTTTGATCCCCCCAATATTTGGCACAGATGAATTTGGCTGGTGTTGTGAATGGAATTCAGCCATGACAAAGCTAACTGGATGGAAGAGAGAGGATGTGATGGATAAAATGCTATTAGGGGAGGTTTTCGGAACCCATATGGCTTGTTGCCGTCTTAAGAATCAAGAAGCTGTTGTTAATTTTGGAATTGTACTTAACAATGCCATGACTGGTGTGGAAACAGAGAAGGCTGCTTTTGGTTTCTTCACTCGGAAGGGCAAGTATGTAGAATGCTTGCTTTCTGTGAGCAAGAAATTGGATGTAGAGGGTGAAGTTACTGGAGTCTTCTGCTTCTTACAGACAGCTAGCCCTGAGCTTCAACAAGCATTGCATATTCAGCGTTTATCCGAACAAACTGCCTTGAAGAGACTCAAAGCTTTAACTTATATGAAAAGGCAAATTCGGAATCCTTTGTGTGGGATTGTGTTCTCTCGAAAATTGTTGGAGAATACTGAGTTGGGAATTGAGCAAAAACAACTTCTGGACACTGGCACTCAGTGCCAACGCCAGCTTAGCAAAATTCTCGATGACTCGGATCTCGACCGTATCATTGATGGCTACTTGGATTTGGAAATGGTTGAATTCACTCTGCATCAAGTTTTTGTTGCCTGTCTAAGTCAGGTCATGACAAAGAGCAAGGCAATGGGTATCCATATAATCAACGAAGTCACGGAGCACATCATGACAGAAACCTTATATGGTGATAGTCTTAGGCTGCAGCAAGTCTTGGCTGACTTCTTATTGGTTTGCATCAATTTTACGCCAACCGGAGGTCAAGTTGTTGTTGCAGCCTCTTTAACCAAAGATCAGTTAGGCAAATCAGTTCATTTGGCTAACTTGGAGATAAGCATAACACATGATGGTGTTGGTGTTCCGGAAACATTGCTGAACCAAATGTTCGGACGAGACGGACAAGAATCCGAGGAGGGTATTAGTCTGCTCATCAGCAGAAAGTTGCTGAAGCTGATGAATGGAGACGTGCGGTATCTGAGGGAAGCTGGCAAATCATCTTTCATCTTAACAGTTGAACTGGCTGCTTCCCAGAAATTGATTGCTTAA | 3378 | 0.4402 | MSSSRRSQSSSNSSRSRQSARVIAQTSVDAKLHANFEESGSSFDYSNSVRLSSGTVSGENQARCDRVTAAYLHQMQKGKFIQPFGCLLALDDKTLRVIAYSHNASEMLTMVSHAVPSVGDHTALAIGTDIRTIFTPSSAAALQKALAVPEVSLLNPILVHCKTSGKPFYAIVHRITATLIIDFEPVKPHEVPMTAAGALQSYKLAAKAITRLQSLPSGSMETLCDTMVQEVFELTGYDRVMAYKFHEDDHGEVIAEVAKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRAKHVKVLQDPKVSIDLTLCGSTLRAAHSCHLQYMENMNSIASLVMAVVVNDNDEDGDGSDVVQPQKRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQIVEKNILRTQTLLCDMLMRDAPLGIVSQSPNIMDLVRCDGAALLYRDKVWRLGVAPSESHIRELALWLSKCHKDSTGLSTDSLSDAGFPGAAALGDVVCGMAAVRISSMDIVFWFRSHTAAEIRWGGAKHEPGDRDDPTKMSPRSSFKAFLEVVKGRSLPWKDYEMDAIHSLQLILRNSFKDNEIMDISTQAIDTRLNDLKIEGMQELEAVTSEMVRLIETASVPILAVNVDGMVNGWNTKIAELTGLSVEEAIGKDLLTLVEDFSAERVKKMLDMALQGKEEKNFQFEIKTHGVKIDSGPISLVVNACASRNLQNSVVGVCFVAHDMTAEKTVMDKFTRIEGDYRAIVQNPNPLIPPIFGTDEFGWCCEWNSAMTKLTGWKREDVMDKMLLGEVFGTHMACCRLKNQEAVVNFGIVLNNAMTGVETEKAAFGFFTRKGKYVECLLSVSKKLDVEGEVTGVFCFLQTASPELQQALHIQRLSEQTALKRLKALTYMKRQIRNPLCGIVFSRKLLENTELGIEQKQLLDTGTQCQRQLSKILDDSDLDRIIDGYLDLEMVEFTLHQVFVACLSQVMTKSKAMGIHIINEVTEHIMTETLYGDSLRLQQVLADFLLVCINFTPTGGQVVVAASLTKDQLGKSVHLANLEISITHDGVGVPETLLNQMFGRDGQESEEGISLLISRKLLKLMNGDVRYLREAGKSSFILTVELAASQKLIA* | 1126 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Ahy6g0518 | 1125 | Coils | Coil | 399 | 419 | - | - | |
Ahy6g0518 | 1125 | SUPERFAMILY | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 952 | 1114 | IPR036890 | - | |
Ahy6g0518 | 1125 | SMART | HKATPase_4 | 1007 | 1119 | IPR003594 | - | |
Ahy6g0518 | 1125 | CDD | HisKA | 900 | 950 | IPR003661 | GO:0000155|GO:0007165 | |
Ahy6g0518 | 1125 | SMART | HisKA_10 | 895 | 959 | IPR003661 | GO:0000155|GO:0007165 | |
Ahy6g0518 | 1125 | SMART | gaf_1 | 219 | 412 | IPR003018 | GO:0005515 | |
Ahy6g0518 | 1125 | Pfam | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase | 1007 | 1117 | IPR003594 | - | |
Ahy6g0518 | 1125 | Gene3D | - | 937 | 1112 | IPR036890 | - | |
Ahy6g0518 | 1125 | SUPERFAMILY | GAF domain-like | 410 | 587 | - | - | |
Ahy6g0518 | 1125 | ProSiteProfiles | Histidine kinase domain profile. | 902 | 1121 | IPR005467 | - | |
Ahy6g0518 | 1125 | SUPERFAMILY | GAF domain-like | 199 | 399 | - | - | |
Ahy6g0518 | 1125 | PRINTS | Phytochrome signature | 234 | 253 | IPR001294 | GO:0006355|GO:0009584 | |
Ahy6g0518 | 1125 | PRINTS | Phytochrome signature | 517 | 536 | IPR001294 | GO:0006355|GO:0009584 | |
Ahy6g0518 | 1125 | PRINTS | Phytochrome signature | 733 | 753 | IPR001294 | GO:0006355|GO:0009584 | |
Ahy6g0518 | 1125 | PRINTS | Phytochrome signature | 134 | 156 | IPR001294 | GO:0006355|GO:0009584 | |
Ahy6g0518 | 1125 | PRINTS | Phytochrome signature | 550 | 568 | IPR001294 | GO:0006355|GO:0009584 | |
Ahy6g0518 | 1125 | PRINTS | Phytochrome signature | 621 | 637 | IPR001294 | GO:0006355|GO:0009584 | |
Ahy6g0518 | 1125 | PRINTS | Phytochrome signature | 713 | 730 | IPR001294 | GO:0006355|GO:0009584 | |
Ahy6g0518 | 1125 | PRINTS | Phytochrome signature | 319 | 340 | IPR001294 | GO:0006355|GO:0009584 | |
Ahy6g0518 | 1125 | PRINTS | Phytochrome signature | 432 | 452 | IPR001294 | GO:0006355|GO:0009584 | |
Ahy6g0518 | 1125 | PRINTS | Phytochrome signature | 640 | 655 | IPR001294 | GO:0006355|GO:0009584 | |
Ahy6g0518 | 1125 | ProSiteProfiles | Phytochrome chromophore attachment site domain profile. | 219 | 392 | IPR016132 | - | |
Ahy6g0518 | 1125 | PIRSF | Phytochrome_conventional | 1 | 1125 | IPR012129 | GO:0006355|GO:0009585|GO:0009881|GO:0017006|GO:0042803 | |
Ahy6g0518 | 1125 | Gene3D | - | 407 | 580 | IPR043150 | - | |
Ahy6g0518 | 1125 | Pfam | PAS fold | 70 | 186 | IPR013654 | GO:0006355 | |
Ahy6g0518 | 1125 | CDD | HATPase_Phy-like | 1006 | 1117 | IPR044767 | - | |
Ahy6g0518 | 1125 | PANTHER | PHYTOCHROME A | 1 | 1120 | - | - | |
Ahy6g0518 | 1125 | ProSiteProfiles | PAS repeat profile. | 748 | 803 | IPR000014 | - | |
Ahy6g0518 | 1125 | TIGRFAM | sensory_box: PAS domain S-box protein | 625 | 740 | IPR000014 | - | |
Ahy6g0518 | 1125 | Gene3D | - | 200 | 563 | IPR029016 | - | |
Ahy6g0518 | 1125 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
Ahy6g0518 | 1125 | CDD | PAS | 629 | 735 | IPR000014 | - | |
Ahy6g0518 | 1125 | Gene3D | PAS domain | 612 | 748 | - | - | |
Ahy6g0518 | 1125 | CDD | PAS | 762 | 873 | IPR000014 | - | |
Ahy6g0518 | 1125 | SUPERFAMILY | PYP-like sensor domain (PAS domain) | 76 | 188 | IPR035965 | - | |
Ahy6g0518 | 1125 | ProSiteProfiles | PAS repeat profile. | 618 | 688 | IPR000014 | - | |
Ahy6g0518 | 1125 | Pfam | Phytochrome region | 415 | 590 | IPR013515 | GO:0006355|GO:0009584 | |
Ahy6g0518 | 1125 | PANTHER | TWO-COMPONENT HISTIDINE KINASE | 1 | 1120 | - | - | |
Ahy6g0518 | 1125 | Pfam | GAF domain | 219 | 402 | IPR003018 | GO:0005515 | |
Ahy6g0518 | 1125 | SUPERFAMILY | PYP-like sensor domain (PAS domain) | 624 | 731 | IPR035965 | - | |
Ahy6g0518 | 1125 | Gene3D | PAS domain | 79 | 322 | - | - | |
Ahy6g0518 | 1125 | Pfam | PAS fold | 621 | 735 | IPR013767 | GO:0006355 | |
Ahy6g0518 | 1125 | Pfam | PAS fold | 751 | 873 | IPR013767 | GO:0006355 | |
Ahy6g0518 | 1125 | Gene3D | PAS domain | 764 | 878 | - | - | |
Ahy6g0518 | 1125 | SMART | pas_2 | 620 | 686 | IPR000014 | - | |
Ahy6g0518 | 1125 | SMART | pas_2 | 750 | 819 | IPR000014 | - | |
Ahy6g0518 | 1125 | SUPERFAMILY | PYP-like sensor domain (PAS domain) | 765 | 871 | IPR035965 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Ahy6g0518 | Ahy-Chr6 | 6314431 | 6318763 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Ahy6g0518 | 1 | 1122 | Histidine Kinase Gene Family | AT1G09570 | 76.957 | 0.0 | 1811 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Ahy6g0518 | K12120 | - | gmx:100790763 | 1809.27 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Ahy16g0834 | 16 | 14936740 | 14941084 | Ahy6g0518 | 6 | 6314431 | 6318763 | hybridization | |
Ahy6g0518 | 6 | 6314431 | 6318763 | Ahy19g1307 | 19 | 26780666 | 26787283 | PCT | |
Ahy6g0518 | 6 | 6314431 | 6318763 | Ahy9g1036 | 9 | 20761020 | 20767545 | PCT | |
Ahy19g1307 | 19 | 26780666 | 26787283 | Ahy6g0518 | 6 | 6314431 | 6318763 | PCT | |
Ahy9g1036 | 9 | 20761020 | 20767545 | Ahy6g0518 | 6 | 6314431 | 6318763 | PCT |