Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g0515 ATGGGGAAACTTTTCTGGCTTGCCATTGCGATTGCGATAGGACTTGTTTTAAGCAACTGGGTTCATGGCTTTCAAGGATATGAATATCACCACTTCAATGAAACAGAACCCTCATTGCTGGAGGCTCATGAATCATCTTTGTTTCAGAGCAATACTCTCTTCGTGGGACTCACCCTTATTCATACTGCAGCTGCCAAAGGAGCAGTGTGCTTGGATGGATCTTTACCTGCTTATCATTTGCATCGGGGTTATGGATCAGGAGCAAACAGCTGGCTTATTAATTTAGAGGGAGGTGGATGGTGTAACAGCATTAGAACATGTGTTTATCGCAAGAGAACACGGCGTGGATCATCCACATTTATGGAAAAGGAGATTCCTTTTACGGGAATACTGAGCAACAAAGCTGAAGAAAACCCAGATTTTTTCAATTGGAACAGAGTAAAGATTCGTTATTGTGATGGAGCATCATTTACCGGTGATAGTGAAGACAAGACAGCAGAGCTACAATTCAGAGGACAGAGGATTTGGGCAGCCGCAATAGAAGATTTGATGTCCGAGGGAATGCGCTTCGCCGAGCAGGCTCTTCTCTCCGGATGCTCTGCCGGTGGCTTGGCTACTATCATACACTGCGACGGATTTCGCAACCTCTTTCCTAGGACCACCACAGTGAAGTGTCTTAGTGATGCCGGATTGTTTCTTGATGCAATTGATATATCTGGTGGCCATACCCTCAGAAATTTCTACACCGGTGTCGTAGGATTGCAGGGAGCACAGAAGAATTTGCCAGAGATATGTACTAATCATCTTGACCCCACATCGTGCTTCTTCCCCCAGAACTTGATTGCGAGTGTGAGAACCCCGCTATTCATTCTCAATGCTGCTTATGATTCATGGCAGATCCAATCGAGTATAGCGCCTCCATCAGCAGATCCACATGGATATTGGCATGATTGCAGATTAAACTATGCTAAATGTACTACATCACAAATCCAATTCCTTCAAGGATTCAGGATTCACATGCTGAACATTATAAAAGAGTTCTCAAGATCATACAAGAATGGATTGTTCATCAATTCATGTTTCTCTCACTGCCAATCGGAGAGGCAGGACACATGGTTCGCTGAAAATTCTCCAATAGTCAAGAACAAGGTAATTGCTGTGGCTGTTGGAGATTGGTATTTCGAGCGCGCAGGTGTGAAGGTGATTGATTGTCCTTACCCTTGTGATAACACGTGTCACCATCTCGTATTCAGATCATGA 1260 0.4429 MGKLFWLAIAIAIGLVLSNWVHGFQGYEYHHFNETEPSLLEAHESSLFQSNTLFVGLTLIHTAAAKGAVCLDGSLPAYHLHRGYGSGANSWLINLEGGGWCNSIRTCVYRKRTRRGSSTFMEKEIPFTGILSNKAEENPDFFNWNRVKIRYCDGASFTGDSEDKTAELQFRGQRIWAAAIEDLMSEGMRFAEQALLSGCSAGGLATIIHCDGFRNLFPRTTTVKCLSDAGLFLDAIDISGGHTLRNFYTGVVGLQGAQKNLPEICTNHLDPTSCFFPQNLIASVRTPLFILNAAYDSWQIQSSIAPPSADPHGYWHDCRLNYAKCTTSQIQFLQGFRIHMLNIIKEFSRSYKNGLFINSCFSHCQSERQDTWFAENSPIVKNKVIAVAVGDWYFERAGVKVIDCPYPCDNTCHHLVFRS* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g0515 419 PANTHER NOTUM-RELATED 5 417 IPR004963 GO:0016787
Ahy6g0515 419 PANTHER PECTIN ACETYLESTERASE 5 417 - -
Ahy6g0515 419 Pfam Pectinacetylesterase 49 397 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g0515 Ahy-Chr6 6276287 6279968 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g0515 1 418 Carbohydrate Esterase AT1G57590 67.780 0.0 608
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g0515 K19882 - gmx:100782401 754.207
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0837 16 14970929 14974724 Ahy6g0515 6 6276287 6279968 hybridization
Ahy6g0515 6 6276287 6279968 Ahy19g1316 19 27090740 27095461 PCT
Ahy6g0515 6 6276287 6279968 Ahy9g1045 9 21080573 21084953 PCT
Ahy19g1316 19 27090740 27095461 Ahy6g0515 6 6276287 6279968 PCT
Ahy9g1045 9 21080573 21084953 Ahy6g0515 6 6276287 6279968 PCT