Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g0513 ATGATGCCTTTGCATGAGTTGTACCGCAAGGCCAAGGAGAAGCTTGATTGTTCTAAAGAGATCAATAGCACAAGTGCAACTGATCATTCAACCGCACCAGAGAGTGATTTCTATGAACTTGTTTGGGAAAATGGTCAGATTTCAATGCAGGGTCAGTCAAGTAGTAGAGGTAGAAAGAGTCCAACTTGTAAGAGTTTAACATCTCATTGTCCCAAGGGTCTTCAACATAGGGATGTAGTGGGATATGGTAATGGTACCAATAATGTTAATATGATGAGGATGGGGAAGTTTGGGGATTCAGAAAGTGGACTGAATGAGATTAGAATGCCGGCTCCATCTGCTGAAGACGAAGACGTGATACATTGGTTGAATTATGGAATGGATGAATCTTTGCCACATGACTATGGTTCTGATTTCATACATGAACTCTCTGGGGTCACCATGCATGAAATCCCTCCCTTAAATAACCTCTCTTTGTTGGACAAAAGAAGCAATTCCAATCAGTTACTTAGGGACTCTCACAAGAACTATGCACGCCATGCTTTTGGTTCAGAACAAGGGATCCTTAACAAGGACTTTTCGGTTATGGCTAAAGGAGAGATTGAGATCCCTAGACCCAAACCTAGTACAAGTCAATTTTGCCAACCATCATCATATCAATGTCAAGGATCATTTGCATCTGTTAGGTCCAAAGCATCAGAGATAACAGAGAATAATGGTAGTAACCCTACTCATCAAGTACCTTGTGGGGAACTGGCTCAGATTTTCCCATCTGCTTCAAGTGGTTTTTCTGGGTTAAAGTTGGATAAGCAAGATCAGGTTATGTGCAGCAGTAGTTCCACTATAATGAACTTCTCCCATTTCGCTAGACCTGCTGCTATTGTGAAGGCTAATCTTCAGAACATTGGGTTGTCTTCATCAAGATCAGATGGTATTGAAAACAAAAATAACGATGCTTCTGCGACCGCAAGCAATCCTCCTGAATTAACAAAAGCTGGTTTTAGTGGCGAACATCCGAAACAATCCGCTGTGCACGAGCTGAAGATTGTGGAGCCTTCTAAGGCTGATTTGAAGCAATTGGAGCCCTCTAAGGCTGATTTGAAGCAATTGGAGCCAAAATCTCTTGAAGTGAATGCTACTGTTTTGAGGCAATCTGATCCTGCTCGAAAAGAAGATGTGTCAAAGATTTATCAAAGTTCCAATCTACTTCTTTGTGAAAGTACCAATAAAGGAGAGGAAGCTGTTGTAAAAAATATGGAGCCTGCAGTAGCCTCTTCATCCGTTTGCTCTGGCAATGGCGCAGAGAGAATTTCGGGCAACCCAAACCAAAGTTTGAAGCGAAAAAGACAAGAAACAGAGGACTCTGAGTGCCACAGTGAAGATGTTGAGGAAGAATCAGTGGGTGTTAAAAAGGCAGGTCCAACACGAGGTGTTAAGAGAAGTCGTTCAGCCGAAGTGCATAATCTATCTGAAAGGAGGCGAAGAGACAGGATCAATGAGAAGATGCGTGCATTGCAAGATCTCATACCAAACTGCAATAAGGTGGACAAAGCTTCAATGCTGGACGAGGCAATCGAGTATCTCAAAACACTTCAACTCCAAGTTCAAATCTTTTTTATGCAGATTATGTCAATGGGAGCTGGTTTGTATATGCCTCCAATGATGTTACCTGCAGGAATGCAGCACATGCATCCACCAATGGCTTCCTTTTCTCCGATGGGCGTTGGCATGCAGATGGGGTTGGGAATGGGTTATGGAATGGGTATGCCTGACATGAATGGTGGACCTTCTAGATTCCCAATGATTCAGGTGCCCCAAATGCACAGAACTCATCCTCCGGCCGCACCTATGCCCGGACCCTCTGCATTACATGGGATGGGAAGATCAAATCCTCCAGTGTTTGGCCTGCCTAGCCAGGGACTTCCAATTCCAACTATGCCGCGTGCTCCAATGTTTTCTTATCCAGGAGAGCCTGTTGCAAACTCACCAGCCTTACAACCAAATGCTTGTGGAACAGCAGGACTTACGGAAACTGAGAATCCAGCTTCAGCATCTAACCAAAAGGATCCAATGCCAATTATGCAGAACACCAATGGTTGTAACTCGACGAGTCAGACTACAAAACAGTGTGAAGCAGCAGCAGCTGGCAGGATTGAACCCTCTGCCTCTCAGGCTAACGACGGCAGAGCTGTGGATGCCACGAGAAAAGATAACCTTGTGACTGATAAATTCGACTAG 2238 0.4419 MMPLHELYRKAKEKLDCSKEINSTSATDHSTAPESDFYELVWENGQISMQGQSSSRGRKSPTCKSLTSHCPKGLQHRDVVGYGNGTNNVNMMRMGKFGDSESGLNEIRMPAPSAEDEDVIHWLNYGMDESLPHDYGSDFIHELSGVTMHEIPPLNNLSLLDKRSNSNQLLRDSHKNYARHAFGSEQGILNKDFSVMAKGEIEIPRPKPSTSQFCQPSSYQCQGSFASVRSKASEITENNGSNPTHQVPCGELAQIFPSASSGFSGLKLDKQDQVMCSSSSTIMNFSHFARPAAIVKANLQNIGLSSSRSDGIENKNNDASATASNPPELTKAGFSGEHPKQSAVHELKIVEPSKADLKQLEPSKADLKQLEPKSLEVNATVLRQSDPARKEDVSKIYQSSNLLLCESTNKGEEAVVKNMEPAVASSSVCSGNGAERISGNPNQSLKRKRQETEDSECHSEDVEEESVGVKKAGPTRGVKRSRSAEVHNLSERRRRDRINEKMRALQDLIPNCNKVDKASMLDEAIEYLKTLQLQVQIFFMQIMSMGAGLYMPPMMLPAGMQHMHPPMASFSPMGVGMQMGLGMGYGMGMPDMNGGPSRFPMIQVPQMHRTHPPAAPMPGPSALHGMGRSNPPVFGLPSQGLPIPTMPRAPMFSYPGEPVANSPALQPNACGTAGLTETENPASASNQKDPMPIMQNTNGCNSTSQTTKQCEAAAAGRIEPSASQANDGRAVDATRKDNLVTDKFD* 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g0513 745 MobiDBLite consensus disorder prediction 48 69 - -
Ahy6g0513 745 MobiDBLite consensus disorder prediction 306 342 - -
Ahy6g0513 745 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 481 550 IPR036638 GO:0046983
Ahy6g0513 745 MobiDBLite consensus disorder prediction 425 445 - -
Ahy6g0513 745 MobiDBLite consensus disorder prediction 446 470 - -
Ahy6g0513 745 CDD bHLH_AtPIF_like 482 549 - -
Ahy6g0513 745 Gene3D - 478 538 IPR036638 GO:0046983
Ahy6g0513 745 MobiDBLite consensus disorder prediction 730 745 - -
Ahy6g0513 745 MobiDBLite consensus disorder prediction 425 495 - -
Ahy6g0513 745 PANTHER TRANSCRIPTION FACTOR PIF3 2 706 - -
Ahy6g0513 745 Coils Coil 445 465 - -
Ahy6g0513 745 MobiDBLite consensus disorder prediction 478 495 - -
Ahy6g0513 745 MobiDBLite consensus disorder prediction 306 329 - -
Ahy6g0513 745 MobiDBLite consensus disorder prediction 48 70 - -
Ahy6g0513 745 PANTHER TRANSCRIPTION FACTOR PIF3 2 706 IPR044273 GO:0003700|GO:0006355
Ahy6g0513 745 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 482 531 IPR011598 GO:0046983
Ahy6g0513 745 Pfam Helix-loop-helix DNA-binding domain 486 532 IPR011598 GO:0046983
Ahy6g0513 745 SMART finulus 488 537 IPR011598 GO:0046983
Ahy6g0513 745 MobiDBLite consensus disorder prediction 711 745 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g0513 Ahy-Chr6 6247820 6252190 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g0513 2 618 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G09530 33.175 4.11e-61 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Ahy6g0513 HLH 5.80E-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g0513 K12126 - gmx:100794974 718.768