Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g0511 ATGGCGGAAGGCACAGCCACCTGCATAGACATCCTCCTCGCCATCATCCTTCCTCCTCTTGGGGTCTTCCTCAAGTATGGCTGCCACGTAGAGTTCTGGATCTGTTTGGTACTCACCCTTTTTGGATATCTCCCTGGAATTATTTATGCTGTTTATGCTATCACCAAGTGA 171 0.4854 MAEGTATCIDILLAIILPPLGVFLKYGCHVEFWICLVLTLFGYLPGIIYAVYAITK* 57
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g0511 56 PANTHER LOW TEMPERATURE AND SALT RESPONSIVE PROTEIN 2 56 - -
Ahy6g0511 56 Pfam Proteolipid membrane potential modulator 8 54 IPR000612 GO:0016021
Ahy6g0511 56 ProSitePatterns Uncharacterized protein family UPF0057 signature. 12 27 IPR000612 GO:0016021
Ahy6g0511 56 PANTHER HYDROPHOBIC PROTEIN RCI2 LOW TEMPERATURE AND SALT RESPONSIVE PROTEIN LTI6 -RELATED 2 56 IPR000612 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g0511 Ahy-Chr6 6233464 6234659 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g0511 4 56 RCI2 Gene Family AT3G05890 79.245 4.75e-26 87.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g0511 - - rcu:8274968 105.145