Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g0503 ATGGGCGGAGGTGGACCGAACGCGGAGGCACAGTATTCGACGGCCAAGACCTCCGTGTGGTGGGACATAGAGAACTGCCACGTTCCTAAAGGCTGCGATCCCCACGCCATCGCTCAGAACATCAGCTCTGCACTGGTCCGCATGAATTACTGTGGTCCCGTCTCCGTCTCTGCCTACGGCGACACCACTCGTATCCCCGCCTCTGTACAGCACGCTCTCTCCAGCACCGGCATCTCCCTCAACCATGTCCCCGCTGGCGTTAAAGATGCTAGCGACAAGAAGATTCTTGTTGACATGCTGTTTTGGGCAGTGGACAATCCCGCACCTGCTAATTATTTATTAATTTCTGGCGACAGAGACTTCTCTAATGCTCTCCATCAACTGCGGATGAGAAGATATAATATTCTTCTTGCGCAACCTCAGAAAGCATCTGCACCACTAGTAGCAGCTGCTAAGAGTGTATGGCTCTGGACTAGTCTTTTAGCTGGAGGGCCTCCTCTAACTAATGGCGAATCACAACAACTTGGTAATAATAGCCTTGTAACAAGTTCCGACACCTTAACAATTCCGGTCACTAGTGTCGCTCAGACACAGCCACAGGCTGATTCCTACACCGAAGTGCATGTAGGAAATCAGAAGTTTCCAAATGGAGGAGGAAGGGGATACGATCCTAGGTATCAGGGGAAAACAAATTGGAGAAACTCGGGTCAGACAAATGGACCCAAGGCCATGAATCCACCGCCAGTTGGGCATCAAGATAGTCGTAATAATATAAACTCTTATCGACCTGGCAACTTCAATCCAAATGTTTCTTCAAGTGGACCTGCTCCAAATTTTATTCGTGGCAATACTGAACAGTTATGGAACAATAGCAATAATATACAGGGAAATCATCAAAATCCTTATTCACAGCCTCCTTTAAGACCAAACAGTTTCCCACTGCAACCTCCTTTTGCATCAAATAATTCTTATCCTCCAAGTACCCATACTTTTGCAAATTCACCAGTGCCACCGAGGACTGGTGTCCCCAGCTTCACTGCAGTTCCACCACCAAATGTGCCTGAAATTGGCAATCTGAACATTTCTGGATATCCCAATGGTGTTCATAATCCACGTCCTGTTAAGCAACGCAGTGGGGAATTGAAGCAGAATCCTAACAATAATGCTCCACTTCCTGTAACATCAACTGTTGAACAAAATGGACATATGGTACTTAGCAATAGCACGCAACATTTACAAGGCTATTCAAATGGAAATGGTCCAGACCATCAACTTGCATCATCGACGGGTAATAATAACCATTCTGGTAATGGCATGTGGGGATCTCCAGGTTGCCCTAAACCGTCTGAATATGTCCAAGGCCTTATAGGGGTTGTTTTACTAGCCTTGAATTCACTAAAAAATGAGAAGATTATGCCAACAGAGGCAAATATAACTGATTGCATTCGATATGGAGATCCCAGGCACCGCAACACTGATGTTAAGAAAGCTTTGGAGAGTGCTATTGAGCAGCAGATGGTGGTGAAACAGAATTTAGGTGCTTTGCAGCTGTATGTTGGTAAGAATGATAAACTTTGGAAGTGCATAAATCCTATAGCTGGTAATCCTAAGCAGCACTCAAAAGAAACCTGGGATGAAGTTCAAAAGTTTCTGACAACTTCTTCAGGAAGATCAGCATTGATGGGTACTCAGTGCAAGTATGAAGCAGGAAGGTTAACTACTGGACCGAGAACATTGAAATTGTACAAAACTGATGGAGACTGCATTCCCCCTGCAATGAAGCTCATATTAAACTATTCTCAACAAAATTACAAGGTATGTATGGAGTTTTGA 1833 0.449 MGGGGPNAEAQYSTAKTSVWWDIENCHVPKGCDPHAIAQNISSALVRMNYCGPVSVSAYGDTTRIPASVQHALSSTGISLNHVPAGVKDASDKKILVDMLFWAVDNPAPANYLLISGDRDFSNALHQLRMRRYNILLAQPQKASAPLVAAAKSVWLWTSLLAGGPPLTNGESQQLGNNSLVTSSDTLTIPVTSVAQTQPQADSYTEVHVGNQKFPNGGGRGYDPRYQGKTNWRNSGQTNGPKAMNPPPVGHQDSRNNINSYRPGNFNPNVSSSGPAPNFIRGNTEQLWNNSNNIQGNHQNPYSQPPLRPNSFPLQPPFASNNSYPPSTHTFANSPVPPRTGVPSFTAVPPPNVPEIGNLNISGYPNGVHNPRPVKQRSGELKQNPNNNAPLPVTSTVEQNGHMVLSNSTQHLQGYSNGNGPDHQLASSTGNNNHSGNGMWGSPGCPKPSEYVQGLIGVVLLALNSLKNEKIMPTEANITDCIRYGDPRHRNTDVKKALESAIEQQMVVKQNLGALQLYVGKNDKLWKCINPIAGNPKQHSKETWDEVQKFLTTSSGRSALMGTQCKYEAGRLTTGPRTLKLYKTDGDCIPPAMKLILNYSQQNYKVCMEF* 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g0503 610 CDD PIN_limkain_b1_N_like 16 140 - -
Ahy6g0503 610 MobiDBLite consensus disorder prediction 314 338 - -
Ahy6g0503 610 Pfam NYN domain 16 152 IPR021139 GO:0004540
Ahy6g0503 610 MobiDBLite consensus disorder prediction 410 439 - -
Ahy6g0503 610 MobiDBLite consensus disorder prediction 410 444 - -
Ahy6g0503 610 PANTHER LIMKAIN B LKAP 2 571 IPR024768 GO:0005777|GO:0010468|GO:1903231
Ahy6g0503 610 MobiDBLite consensus disorder prediction 250 305 - -
Ahy6g0503 610 MobiDBLite consensus disorder prediction 196 210 - -
Ahy6g0503 610 MobiDBLite consensus disorder prediction 196 338 - -
Ahy6g0503 610 MobiDBLite consensus disorder prediction 228 242 - -
Ahy6g0503 610 MobiDBLite consensus disorder prediction 363 394 - -
Ahy6g0503 610 Gene3D - 7 159 - -
Ahy6g0503 610 PANTHER ACID BINDING PROTEIN, PUTATIVE-RELATED 2 571 - -
Ahy6g0503 610 MobiDBLite consensus disorder prediction 377 394 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g0503 Ahy-Chr6 6120705 6124696 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g0503 8 199 C2H2 Transcription Factor Family AT5G61190 71.282 1.69e-86 289
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g0503 - - gmx:100794608 944.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0852 16 15198339 15202247 Ahy6g0503 6 6120705 6124696 hybridization