Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g0480 ATGTCATCTCTGCAACCAAACGTTGATTCTACAAATTCGGAAACGATGCAACGATCCAATCCCAAGAAGCGCCGGAAAATTGGACACAGCAATTCCCTCAGCCTCGTTCCATGGAAATCCGAGACGCAACAGCGGATCTACTCTTCCAAGCTCGCAGAAGCTCTCCGCTACGTCATCCATCGGAACCCTCCGTCTCTGCCGGCAAAGTCTAGTGCCGGTCGAGAGGTTCGCGAGACCGCCGACCGAGTCCTCGCTGCCACTGCAAAAGGCCGGACTCGTTGGAGCCGCGCTATCCTTGCTAGTCCACTCAACCGGTGGAAGCTCCGGCGGATGCACAAGAAGGTTCACAAGGCCTCCACCGGATTGCCGAAGAAGTCGCCGGAGAGTCGCCGGAGATTACCGGTGGTGCAGAAGAAAGCGCGCGTTCTCGGCCGGTTAGTCCCCGGCTGCCGGAAGCTCACGTTCCCGAACCTTCTAGAAGAAGCCACAGACTACATCTCGGCGTTGGAGATGCAGGTGAGAGCCATGACGGCACTCACGGAGTTACTCACCGGCGGCGGCTCCCTCGCCTCGGCTTGA 579 0.5855 MSSLQPNVDSTNSETMQRSNPKKRRKIGHSNSLSLVPWKSETQQRIYSSKLAEALRYVIHRNPPSLPAKSSAGREVRETADRVLAATAKGRTRWSRAILASPLNRWKLRRMHKKVHKASTGLPKKSPESRRRLPVVQKKARVLGRLVPGCRKLTFPNLLEEATDYISALEMQVRAMTALTELLTGGGSLASA* 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g0480 192 MobiDBLite consensus disorder prediction 115 134 - -
Ahy6g0480 192 MobiDBLite consensus disorder prediction 1 31 - -
Ahy6g0480 192 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 120 169 IPR011598 GO:0046983
Ahy6g0480 192 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 130 184 IPR036638 GO:0046983
Ahy6g0480 192 MobiDBLite consensus disorder prediction 1 17 - -
Ahy6g0480 192 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 15 185 IPR044660 GO:0006355
Ahy6g0480 192 PANTHER TRANSCRIPTION FACTOR BHLH149 15 185 - -
Ahy6g0480 192 CDD bHLH_AtIBH1_like 128 180 IPR044549 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g0480 Ahy-Chr6 5882333 5883275 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g0480 1 176 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G09250 46.392 8.68e-43 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g0480 - - aprc:113873135 221.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0880 16 15743906 15744858 Ahy6g0480 6 5882333 5883275 hybridization
Ahy6g0480 6 5882333 5883275 Ahy19g1377 19 30747191 30748266 PCT
Ahy6g0480 6 5882333 5883275 Ahy9g1100 9 24433759 24434798 PCT
Ahy19g1377 19 30747191 30748266 Ahy6g0480 6 5882333 5883275 PCT
Ahy9g1100 9 24433759 24434798 Ahy6g0480 6 5882333 5883275 PCT