Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g0460 ATGGTAATGATGGATCTCAACAAGGAATGGGTGTGTGAGGAATTGAGTGAGAGCAAGAAGTGTTGTAGTGATTGCAAGACTACCAAGACTCCGCTGTGGAGAGGAGGACCTGCTGGTCCCAAGAGTCTTTGCAACGCGTGTGGAATAAGGTACCGGAAGAGAAGGGCTTCAGCGGTGGGAATGCGAAAAGGACAAGAGAGGAAGAGAGAGAGATCACAAAATGGCGGTAGCAGCAGCTCCTCTGATAACGAGTTGAAGGAGTCGTTGAAAGTGAATTTGATGGCGTTGGGCGAGGAGTTTTGGTTGCTAAAGAAGAAACAGAGGAGTATGTGTTTGTTGGGGGAAGAGGAACAAGCCGCTGTGTGTTTAATGGCACTCTCTTGTGGCTATGTTTTTGCTTAA 402 0.4776 MVMMDLNKEWVCEELSESKKCCSDCKTTKTPLWRGGPAGPKSLCNACGIRYRKRRASAVGMRKGQERKRERSQNGGSSSSSDNELKESLKVNLMALGEEFWLLKKKQRSMCLLGEEEQAAVCLMALSCGYVFA* 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g0460 133 Pfam GATA zinc finger 22 55 IPR000679 GO:0006355|GO:0043565
Ahy6g0460 133 Gene3D - 17 80 IPR013088 GO:0006355|GO:0008270
Ahy6g0460 133 ProSitePatterns GATA-type zinc finger domain. 22 47 IPR000679 GO:0006355|GO:0043565
Ahy6g0460 133 PANTHER OS01G0976800 PROTEIN 9 133 - -
Ahy6g0460 133 SMART GATA_3 16 66 IPR000679 GO:0006355|GO:0043565
Ahy6g0460 133 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 19 55 - -
Ahy6g0460 133 MobiDBLite consensus disorder prediction 59 73 - -
Ahy6g0460 133 PANTHER GATA TRANSCRIPTION FACTOR 16 9 133 - -
Ahy6g0460 133 MobiDBLite consensus disorder prediction 56 85 - -
Ahy6g0460 133 ProSiteProfiles GATA-type zinc finger domain profile. 16 52 IPR000679 GO:0006355|GO:0043565
Ahy6g0460 133 CDD ZnF_GATA 22 73 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g0460 Ahy-Chr6 5609915 5610947 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g0460 15 133 C2C2-Gata Transcription Factor Family AT5G49300 53.719 2.21e-31 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Ahy6g0460 GATA 1.20E-17 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g0460 - - lang:109330084 150.599
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0904 16 16199616 16200720 Ahy6g0460 6 5609915 5610947 hybridization