Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g0457 ATGGTAAGGGGAGGAAAAATTAGTGGCAAAAGCAGCTTTAGGAATAGGGCTCGGTCAAAGGAAGGTGGTTCCGATGATTCCGATGAAGATTATGTGGTTTCAGATGAAGATGAAGAAGTGTCCGATTGTCCGGACGAATATAGCTCCTCTCTAGATGGATGTGCAACAGAGGAGAGTTATGATGCTTTTATAGACGAGGAGGAAGAAGATGATGGAATTCAACAAGTGAAGAAATTCAATAGATCAGAGGCCGGGAATGGTGTTTGTGGCCGACAGAAAAATGCAAGTAAAAGCAGACGAAAGAGGGGAAGGATTGCATATGCAAAACATGAAGATCAAGAAGCACAAGAAGAACAAGAACAAGAACAAGAACAAGAACAAGTAAAAGTAGAAGATGGGGATGGGGATGGGGATGGGGATGGAGATGGAGATGGATGTGGAGGTGGAAGTAGGGAGAAGGAGGGTGAGGATGATGAGGATGAAGATGAGGATTTCAAATATGATGATTATGATGAGGACAATGGCGATGACGACGACGATGAGGACTTTGATTTTGAAGATGATGATGAGGAATTTTCACTAGAGGAAGGAGATTACTTAGTAGAGGAAGAAGAATCAAGGGGAAGAAAGAAGAAAAATAACAACATGAAAGTGCGCAAGAAGATTTTGAAGAGAAAGGTTTCCGTGACTTCTACCAAACATCGAAAGAGGAAGAAATCTAGAGCTTCAAATAAACCCTTGAAAAAGAAAAGAAGGAATAGAGGGTTAAAGAGGAAAGTAAGATGTGATGATGTGGATGATTTTATTGATAATGGCCCAGCCAGCAGGACAAAAAGGAGGAAAGAATTGGGTAGGCCAAGGAGAATGCTTTTACCCGAGGATTCCAATTCCGATGCATATGGTGCCTCTTCTGGTTCATCTGATTTCGAGTTTACTATCTCCGAAGAAGAAAGAGAACAGGTCCGAGAAGCCCAAGAATTGTGTCAAAGCTCTAGAAGGAATTTGAGGAGTTCTTCCCATTTAACCAAAAATGAAGAGATTGAGTTACATGAAGATCGACACCAACTAAGGAAGCCTCATGGTCGAAAGGGTAAGGAAAAGATAGATGAATCTCAAGGAAGAAAGGGTAAGGAAAAGGTAGAGGATTTAAAAAATGAGTTGGGAAAGCAGGTGTGCGGAATTTGTTTGTCTGAGGAAAATAAAAGAAAAATAAGAGGAATTCTAAATTGTTGTACTCACTACTTTTGCTTTACCTGCATTGTGGAGTGGGCAAAAGTGGAAACTCGGTGTCCTTTGTGTAAGCAGAGATTCAGAACAATTACTAAGCCTGCCAGATCAACTGCAGGAGTTGATTTTAGAGAAGTGGTAGTAGAAGTGCCTGAACGCGACCAGGTTTACCAGCCCACCGAAGAAGAACTCAGGAGCTATATTGATCCATATGAGGATGTTATTTGTTCAGAGTGCCATCAAGGTGGAGATGATGCCCTCATGTTACTATGTGATATCTGTGATTCCCCTGCACACACATATTGTGTTGGTTTGGGTCGGGAAGTACCTGAAGGTAATTGGTATTGTGATGGTTGCAGACCGGATGCTTTGGCATCTTCAAGCTCTCAAGTTCAAGAACGTCTGACTGATCCAAGTGTCCCAACTCAAAACTTGCCTGTTAGACCATCAATTGTTCTTAATGAACGAGAAAGTATAGACCTCAACATGATATCTTCACCCCGGGCATCTTTTAGTCAAGGATTTGGGCATATTTCATCTGCTAGAGTTTCTGGTAGAAGTGTTGAACTAGCTTCTCCAGGACCTGGAGGAGGGGCACCGACTTTATCAGAAAGGCGCTGGATACTCCGACAGATTCACCAGCTACGTTCGGTATCTGGCAGAACCAATGGTACTTCAGCTACCAATTCAACAAGTAACTTGTATAACTCTCAAACCGATCAAGGCAGGGAAACAAATGCAACACAGCATACAAGGGCACAGGATGCGGGAACATCGTACCTCCCATTCTTAGACGAGAGATTATGCAACAATATGTCTCCATCAATGCAGAATGCAGACCCCTCCTCAACGAGAATTGGCAATGCTAGAAGACCAATGGTTCAGGATTCAGCTATGCTTGCCAACAGATCTATGCACGGTGTGCTATTGCCCGTACTTGTGGCAACAACACCTTCCGTATCTGGTTATGAACAAGTTTATCCGTTCAACAACAGCATAGACGTGGTCACTGACAATAGCTTACCCGTTGCTATCAAAGAAGAGAGTAACTTAGAAACAATAAAGCAGCAGTTGAAGTCGATGGTTAAAAGACACCTGTGGAGCTTATCTCGAGATGTTGATTTAGGGCATAATACTCTCAAGGACGTTGCAAGGAGTTCTAAACACACCGTACTAGCTGCATGTGGTCTTGAGCACAAGAAGAGTGAGGTTCGGTCTGTGCCCGCACCAGATGTCTGCCCCCACATTGAACTAATGGCAGGTGGACAAACTAGTTTGATAAGAGGTTGCTGCTCAACTTGCTTTGATTCTTTTGTAAAAAATGTGGTAAAAAATATTTTGGACAGAAGAATGTCCTCACAGTGGTTACGATTAGGTCTCTAG 2610 0.4276 MVRGGKISGKSSFRNRARSKEGGSDDSDEDYVVSDEDEEVSDCPDEYSSSLDGCATEESYDAFIDEEEEDDGIQQVKKFNRSEAGNGVCGRQKNASKSRRKRGRIAYAKHEDQEAQEEQEQEQEQEQVKVEDGDGDGDGDGDGDGCGGGSREKEGEDDEDEDEDFKYDDYDEDNGDDDDDEDFDFEDDDEEFSLEEGDYLVEEEESRGRKKKNNNMKVRKKILKRKVSVTSTKHRKRKKSRASNKPLKKKRRNRGLKRKVRCDDVDDFIDNGPASRTKRRKELGRPRRMLLPEDSNSDAYGASSGSSDFEFTISEEEREQVREAQELCQSSRRNLRSSSHLTKNEEIELHEDRHQLRKPHGRKGKEKIDESQGRKGKEKVEDLKNELGKQVCGICLSEENKRKIRGILNCCTHYFCFTCIVEWAKVETRCPLCKQRFRTITKPARSTAGVDFREVVVEVPERDQVYQPTEEELRSYIDPYEDVICSECHQGGDDALMLLCDICDSPAHTYCVGLGREVPEGNWYCDGCRPDALASSSSQVQERLTDPSVPTQNLPVRPSIVLNERESIDLNMISSPRASFSQGFGHISSARVSGRSVELASPGPGGGAPTLSERRWILRQIHQLRSVSGRTNGTSATNSTSNLYNSQTDQGRETNATQHTRAQDAGTSYLPFLDERLCNNMSPSMQNADPSSTRIGNARRPMVQDSAMLANRSMHGVLLPVLVATTPSVSGYEQVYPFNNSIDVVTDNSLPVAIKEESNLETIKQQLKSMVKRHLWSLSRDVDLGHNTLKDVARSSKHTVLAACGLEHKKSEVRSVPAPDVCPHIELMAGGQTSLIRGCCSTCFDSFVKNVVKNILDRRMSSQWLRLGL* 870
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g0457 869 MobiDBLite consensus disorder prediction 212 257 - -
Ahy6g0457 869 MobiDBLite consensus disorder prediction 1 308 - -
Ahy6g0457 869 PANTHER F18C1.6 PROTEIN 1 857 - -
Ahy6g0457 869 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 471 549 IPR013083 -
Ahy6g0457 869 PANTHER F18C1.6 PROTEIN 1 857 - -
Ahy6g0457 869 SUPERFAMILY RING/U-box 391 440 - -
Ahy6g0457 869 SUPERFAMILY FYVE/PHD zinc finger 455 530 IPR011011 -
Ahy6g0457 869 SMART ring_2 392 433 IPR001841 -
Ahy6g0457 869 Coils Coil 314 334 - -
Ahy6g0457 869 ProSiteProfiles Zinc finger PHD-type profile. 482 531 IPR019787 -
Ahy6g0457 869 SMART PHD_3 484 529 IPR001965 -
Ahy6g0457 869 CDD RING-HC_Topors 392 434 - -
Ahy6g0457 869 MobiDBLite consensus disorder prediction 154 201 - -
Ahy6g0457 869 MobiDBLite consensus disorder prediction 105 134 - -
Ahy6g0457 869 Pfam Ring finger domain 391 434 IPR001841 -
Ahy6g0457 869 MobiDBLite consensus disorder prediction 258 279 - -
Ahy6g0457 869 ProSitePatterns Zinc finger RING-type signature. 411 420 IPR017907 -
Ahy6g0457 869 MobiDBLite consensus disorder prediction 627 664 - -
Ahy6g0457 869 MobiDBLite consensus disorder prediction 327 380 - -
Ahy6g0457 869 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 368 455 IPR013083 -
Ahy6g0457 869 MobiDBLite consensus disorder prediction 362 380 - -
Ahy6g0457 869 Coils Coil 105 128 - -
Ahy6g0457 869 MobiDBLite consensus disorder prediction 28 45 - -
Ahy6g0457 869 Pfam PHD-finger 484 530 IPR019787 -
Ahy6g0457 869 MobiDBLite consensus disorder prediction 338 355 - -
Ahy6g0457 869 ProSiteProfiles Zinc finger RING-type profile. 392 434 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g0457 Ahy-Chr6 5592302 5595967 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g0457 479 528 C2H2 Transcription Factor Family AT3G01460 46.154 1.91e-08 56.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Ahy6g0457 PHD 1.30E-08 CL0390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g0457 - - gmx:100797448 853.203