Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g0453 ATGGGGCATTTATCTTCTATGTTGAATGGTTTGGCGAGGTGGAAGAAGGGAAAAAGTTCTGGCAGATGTGTCGGTAGAGATGCTGCTGAAGCTATGGCAAGGGAAGCCAAGAAAAATGACTTGATTCTATGCAGTTCCGGCACTGTCAATGTTGATGGTTCAAAGAACTATGCCTCAATCTTTTCCAAGAAAGGCCAGAAAGGTGTGAACCAAGATTGCTGTGTAGTCTGGGAGGAATATGGGTGCCAAGAGGACATGATATTCTGTGGGATATTTGATGGGCATGGGCCATGGGGTCACTTTGTGGCAAAGAAAGTGAGAGAGACAATGCCATCATCTTTGCTATGCAATTGGCAGGAGGCACTTGCACAATCTCCTCTTGATCCTGAGATTGATGTTGAGCAAGAGAAGAAGCAGAACCGTTTCAACATATGGAAGCACTCTTACTTGAAGACTTGTGCTGCCATTGATCAAGAACTCTTTCGCTACCGCAAGATCGACTCCTTTTACAGTGGAACCACTGCTCTTTCAGTTGTTAGACAGGGTGAACTCATCGTTATAGCAAATGTAGGTGATTCCCGTGCTGTGTTAGCTACATCATCAGATGATGGAAGTTTGGTTCCAGTTCAATTAACAGTTGATTTCAAGCCCAATTTGCCCCAGGAGGCAGAGAGAATATTGCAGTGCCAGGGGAGGGTGTTCTGCTTACATGATGAACCAGGGGTGCATAGGGTGTGGCTGCCGGACGAGGACTCGCCGGGACTCGCCATGTCGAGGGCTTTTGGTGATTACTGCATCAAAGATTATGGTATTATATCAGTACCTGAGGTCACACACAGACATATAAGCACCAAAGACCAGTTTGTTGTGCTAGCCACTGATGGGGTTTGGGATGTGATCTCCAATGAAGAAGCAGTGGACATTGTATCATCAACAGCGGAGAAATCAAAGTCGGCGAAGCGATTGGTGGAGTGCGCGGCGCACGCATGGAAGCGCAAGAGGCGGGGGATAGCCATGGATGACATTTCAGCTATTTGTCTCTTCTTCCATTCTTCTTCTTCACCTCACCAAGTTACCTCACTTGCCACTCTAAAATAG 1098 0.4681 MGHLSSMLNGLARWKKGKSSGRCVGRDAAEAMAREAKKNDLILCSSGTVNVDGSKNYASIFSKKGQKGVNQDCCVVWEEYGCQEDMIFCGIFDGHGPWGHFVAKKVRETMPSSLLCNWQEALAQSPLDPEIDVEQEKKQNRFNIWKHSYLKTCAAIDQELFRYRKIDSFYSGTTALSVVRQGELIVIANVGDSRAVLATSSDDGSLVPVQLTVDFKPNLPQEAERILQCQGRVFCLHDEPGVHRVWLPDEDSPGLAMSRAFGDYCIKDYGIISVPEVTHRHISTKDQFVVLATDGVWDVISNEEAVDIVSSTAEKSKSAKRLVECAAHAWKRKRRGIAMDDISAICLFFHSSSSPHQVTSLATLK* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g0453 365 ProSiteProfiles PPM-type phosphatase domain profile. 57 349 IPR001932 -
Ahy6g0453 365 PANTHER ALPHABET, ISOFORM E-RELATED 1 357 - -
Ahy6g0453 365 SUPERFAMILY PP2C-like 53 350 IPR036457 -
Ahy6g0453 365 CDD PP2Cc 56 349 IPR001932 -
Ahy6g0453 365 Pfam Protein phosphatase 2C 81 323 IPR001932 -
Ahy6g0453 365 PANTHER CATALYTIC/PROTEIN PHOSPHATASE TYPE 2C 1 357 - -
Ahy6g0453 365 Gene3D - 41 352 IPR036457 -
Ahy6g0453 365 SMART PP2C_4 49 347 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g0453 Ahy-Chr6 5510317 5513925 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g0453 1 350 PP2C-type Phosphatase Gene Family AT3G05640 70.986 0.0 535
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0912 16 16352189 16355515 Ahy6g0453 6 5510317 5513925 hybridization
Ahy6g0453 6 5510317 5513925 Ahy19g1434 19 35945023 35949640 PCT
Ahy6g0453 6 5510317 5513925 Ahy9g1154 9 27912066 27916967 PCT
Ahy19g1434 19 35945023 35949640 Ahy6g0453 6 5510317 5513925 PCT
Ahy9g1154 9 27912066 27916967 Ahy6g0453 6 5510317 5513925 PCT