Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g0446 ATGGCAATAACTTCAAAGATAATGTCCCTAACATTATGCATGTTTTTATGGCAATTTGCATCTCTTGCATTATTATCAGCATCATCAACTTCTTCCTCCATAGACACAATTTGCAACCTCACACCTTATCCAACATTTTGCAAATCCAATTCCCCTTCTAATGTCCAAGGAGGTGACATTCATGAGTATGGCCGCTTTTACACAAACAAGTCCCTGTCATCATCAAGGGATGTTCTCTCATTACTCTCTAGCTACTTACAATCTCCCTCCAAATTCTCCCAGTCAACGATTCTCGCCCTTGAAGATTGCCACCTCTTAGTTGACCTCAACATAGATTTCTGGACCAAGACTCTACAAACTGTAGACACCACAAACCGCACCCTTAATAGTTCCGAGGCTGAAAACCTTCTTACCATGATTAGTGCTACATTAACCAATCTCGATACCTGCTTAGAAAGCCTTAAAGAAGCCACGTCATCAACCCCTGATGACAACCTAGTAAGCCATGTTTCAAACGGAACCATGTTTTCCAGCATATCTCTTGCACTCTTTAAACGGGGTTGGGCTTCAAGCATAACCACACAACAGAGTCGAAAGCTGTTTTCTGATGCTTACGCGTGGGAACAGAGGGTTCACGAGATAATCAGAAAGAGAGGGAGAAAGCTGCTTCAGAGTGCTCCTGACGGTGTTGTTGTGAACCAAACGGTGGTGGTGAATCCTGATGGCTCTGGAAACTTCACAACTATCAACGATGCTGTGGCTGCGGCACCCAACAACACCGGTGGTGTCAATGGTTTCTTTGTGATTTATGTGGTTGCAGGAGTGTACGAAGAGTATGTATCTATTCCAAAATACAAGCAGTACTTGATGATGATCGGTGATGGTATCAACCAGACCATAATCACCGGCAATCACAGCGCCGGTACTGGCTACACTACCTTCAATTCTTATTCATTTGCTGTGGTTGCGCAAGGATTCGTGGCTATGAATATAACATTTCGCAACACAGCAGGAGCAAGCAATCACCAAGCGGTGGCTCTCAGAAGCGGAGCAGATCTATCCGCATTCTACAATTGCAGCTTCGAAGGGTACCAAGACACTTTATACACACATTCAATGAGACAATTCTACCGAGATTGCGACATTTACGGCACAGTTGACTTCATATTTGGCAACGCAGCAGTTGTGTTGCAAAACTGTAACATTTTGCCACGCCTACCAATGAGTGGCCAGTACAACACCATCACAGCACAGGGCAGAACTGACATTAACCAAAACACAGGAACATCTGTACACAACTGTACAATAACCGCCGCCACCGACTTGGGCACCACTAAAACGTATCTTGGGAGGCCATGGAAGGAGTATTCAAGAACGGTTTACATGCAGTCTTTCATGGACAGTTTGATTGATCCTGCTGGTTGGGCAGAGTGGTCAGGGACATTGTATTTGGACACTCTTTATTATGCGGAATATGATAATTGGGGTCCTGGATCTAACACTAGTAATAGGGTCACTTGGGCAGGCTACCATGTCATTAATGCCACTGATGCACAGAATTTCACAGTTTCTAATTTCATATCCGGTGCTGCATGGTTACCTCCTACTGGAGTCCCCTACTTTCTTGATTTAATTTGA 1638 0.4432 MAITSKIMSLTLCMFLWQFASLALLSASSTSSSIDTICNLTPYPTFCKSNSPSNVQGGDIHEYGRFYTNKSLSSSRDVLSLLSSYLQSPSKFSQSTILALEDCHLLVDLNIDFWTKTLQTVDTTNRTLNSSEAENLLTMISATLTNLDTCLESLKEATSSTPDDNLVSHVSNGTMFSSISLALFKRGWASSITTQQSRKLFSDAYAWEQRVHEIIRKRGRKLLQSAPDGVVVNQTVVVNPDGSGNFTTINDAVAAAPNNTGGVNGFFVIYVVAGVYEEYVSIPKYKQYLMMIGDGINQTIITGNHSAGTGYTTFNSYSFAVVAQGFVAMNITFRNTAGASNHQAVALRSGADLSAFYNCSFEGYQDTLYTHSMRQFYRDCDIYGTVDFIFGNAAVVLQNCNILPRLPMSGQYNTITAQGRTDINQNTGTSVHNCTITAATDLGTTKTYLGRPWKEYSRTVYMQSFMDSLIDPAGWAEWSGTLYLDTLYYAEYDNWGPGSNTSNRVTWAGYHVINATDAQNFTVSNFISGAAWLPPTGVPYFLDLI* 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g0446 545 Pfam Plant invertase/pectin methylesterase inhibitor 33 183 IPR006501 GO:0004857
Ahy6g0446 545 ProSitePatterns Pectinesterase signature 2. 382 391 IPR033131 -
Ahy6g0446 545 Pfam Pectinesterase 236 529 IPR000070 GO:0030599|GO:0042545
Ahy6g0446 545 CDD PMEI-like_3 36 189 - -
Ahy6g0446 545 Gene3D - 229 544 IPR012334 -
Ahy6g0446 545 SMART PMEI_2 29 183 IPR006501 GO:0004857
Ahy6g0446 545 TIGRFAM PME_inhib: pectinesterase inhibitor domain 6 185 IPR006501 GO:0004857
Ahy6g0446 545 SUPERFAMILY Pectin lyase-like 231 542 IPR011050 -
Ahy6g0446 545 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 32 186 IPR035513 -
Ahy6g0446 545 PANTHER PECTINESTERASE 14 541 - -
Ahy6g0446 545 PANTHER PECTINESTERASE 14 541 - -
Ahy6g0446 545 Gene3D Invertase/pectin methylesterase inhibitor family protein 28 186 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g0446 Ahy-Chr6 5422309 5425331 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g0446 10 545 Carbohydrate Esterase AT1G02810 50.780 0.0 553
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g0446 K01051 - gmx:100801141 776.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0919 16 16497319 16499347 Ahy6g0446 6 5422309 5425331 hybridization
Ahy6g0446 6 5422309 5425331 Ahy19g1444 19 37097514 37101352 PCT
Ahy6g0446 6 5422309 5425331 Ahy9g1167 9 29825607 29829411 PCT