Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ahy6g0430 | ATGGGTCTCGGCACCGACAAGGACGACCACGTCGTCCACGACGGAGACTCCAACCCCTTCCCATCCGTCTCTTGCTCCATTTGCCTCGACCCTGTTTCCCGCACCGGCGATAGATCCTGGGCCAACCTTCAATGCGGCCATCAATTTCACCTCGATTGCATTGGCTCAGCCTTCAATATAAAAGGGGCAATGCAATGCCCTAATTGCCGGAAGATTGAGAAAGGTCAGTGGCTTTATGGCTCCCGGTCATATCCAGAATTCAGCACAGATGATTGGGCACACGATGAGGATCTATATGATCTTAGCTACTCTGAAATGTCCTTTGGAGTTCACTGGTGTCCTTTTGGTAACCTGACCCGACTTCCTTCTTTTGAGGAAGGGGAATTTTCATCAACTGCATATCATGATATACTGGGACAACATGCTATATTTGCTGAACATACGGCCGTATCATCTGGTAGTCATCCCTGTCCGTATATAGCATACTTTGGACCATTACATCCTTCCCCCTCGAACTCTGGCAGAACTGGTTCAGAAACATCTAACTTCAGCCACTGGAGTAACCCACCTATACCTAGTGACATGCCAACGTCCTATGCATTTCCTGCCATGGATCTCCATTATCACAGTTGGGAACATCATTCGCCTCATTTTTCATCTGCAAGCAGTCACCTAGGAACTGCAGATCATCCCGCAGTATCACCTGGTAGTCAAAGGCCAGCCAGGGGTAGTTCAGAGGTTCCAAGACCAGGATCTTTTATGCATCCCTTCATTGTTGGTCATAGTTCTGGTGCTAGGGCTGGGACATCAGTTGCATCTTCAATGATACCTCCGTATCCAGGTAGCAATGCCCGGGCCCAGGACAGAGTCCAGGCTCTTCAGGCATACTATCAACCTCCACAACCTCCTAACTCTACCTCAATGCGAACACCTAATGCTTCTGGCACTAGAAGATCCAACAGCCATAGTGGGTCAGTTCAATTAGCACAAGTTTCCCCATCATCGGACCCAAGTGGTGGCTTCTTGTTGATTCCATCAGGTTCATCAGGACGCAATTTTCCGGAAGAAGTCCATATGCCAAGTCGCTTCCAAGCATGGGAAAGAGATCATTTGCCTTCATTATCTTTGAACCACGCAGATAGAGAATCAAGTTGGAGAGCGTACCACCAGGCTGCCAGCGGATCAGAACCAAGTATTAGGTCCAACAGCTTTCGATTAAGGCACGGAACAGAAAGAATGCCTTCACAAAATCGATGA | 1257 | 0.4845 | MGLGTDKDDHVVHDGDSNPFPSVSCSICLDPVSRTGDRSWANLQCGHQFHLDCIGSAFNIKGAMQCPNCRKIEKGQWLYGSRSYPEFSTDDWAHDEDLYDLSYSEMSFGVHWCPFGNLTRLPSFEEGEFSSTAYHDILGQHAIFAEHTAVSSGSHPCPYIAYFGPLHPSPSNSGRTGSETSNFSHWSNPPIPSDMPTSYAFPAMDLHYHSWEHHSPHFSSASSHLGTADHPAVSPGSQRPARGSSEVPRPGSFMHPFIVGHSSGARAGTSVASSMIPPYPGSNARAQDRVQALQAYYQPPQPPNSTSMRTPNASGTRRSNSHSGSVQLAQVSPSSDPSGGFLLIPSGSSGRNFPEEVHMPSRFQAWERDHLPSLSLNHADRESSWRAYHQAASGSEPSIRSNSFRLRHGTERMPSQNR* | 419 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ahy6g0430 | 418 | PANTHER | PROTEIN, PUTATIVE-RELATED | 1 | 418 | - | - | |
| Ahy6g0430 | 418 | SMART | ring_2 | 25 | 69 | IPR001841 | - | |
| Ahy6g0430 | 418 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 21 | 79 | IPR013083 | - | |
| Ahy6g0430 | 418 | MobiDBLite | consensus disorder prediction | 388 | 418 | - | - | |
| Ahy6g0430 | 418 | MobiDBLite | consensus disorder prediction | 297 | 347 | - | - | |
| Ahy6g0430 | 418 | Pfam | Ring finger domain | 24 | 70 | IPR001841 | - | |
| Ahy6g0430 | 418 | SUPERFAMILY | RING/U-box | 19 | 72 | - | - | |
| Ahy6g0430 | 418 | MobiDBLite | consensus disorder prediction | 218 | 261 | - | - | |
| Ahy6g0430 | 418 | MobiDBLite | consensus disorder prediction | 297 | 342 | - | - | |
| Ahy6g0430 | 418 | CDD | RING-H2 | 25 | 70 | - | - | |
| Ahy6g0430 | 418 | PANTHER | OS09G0511500 PROTEIN | 1 | 418 | IPR044274 | GO:0004842 | |
| Ahy6g0430 | 418 | MobiDBLite | consensus disorder prediction | 380 | 418 | - | - | |
| Ahy6g0430 | 418 | ProSiteProfiles | Zinc finger RING-type profile. | 25 | 70 | IPR001841 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Ahy6g0430 | Ahy-Chr6 | 5288403 | 5293084 | Dispersed/Tandem |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Ahy16g0933 | 16 | 16763046 | 16767468 | Ahy6g0430 | 6 | 5288403 | 5293084 | hybridization | |
| Ahy6g0430 | 6 | 5288403 | 5293084 | Ahy19g1463 | 19 | 38068506 | 38078857 | PCT | |
| Ahy6g0430 | 6 | 5288403 | 5293084 | Ahy9g1183 | 9 | 30513435 | 30523177 | PCT |