Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g0408 ATGGCTCCAACTAGGAAGCCTAGAAGTATGAATAAGCGATTCTCGAGTTTAAATGAGGTCTCTCCCGAGAAAGAGGGAATGAACTCAAATAAAAATAAGCAAAAGAAGAAAAAGCTGTCGGATAAATTGGGATCTCAGTGGAACAAAGATGAGCTAGAGCGTTTTTATGAGGCATATAGGAAGTACGGAAAAGACTGGAAGAAGGTTGCTGCAGCTGTACGCAACAGATCTGTTGAAATGGTGGAGGCTCTTTACAATATGAACAGGGCTTACCTATCTCTGCCGGAGGGAACAGCTTCTGTTGTTGGTCTCATTGCAATGATGACAGATCACTATAATGTGCTGGAAGAGAGTGATAGTGAAAAAGAGAGTATTGATTCACCAGGATCCCGAAAACCGGTGAAACGAAAACGTGGAAAAATTGAGCTTGGTGCCTCAAAAGATTCTGTCCATACTCAGTCAATTGCTTCTAATGATGGTTGCCTCTCTCTGTTGAAGAGAAGACGCTTTGATGGTAGCCAGCCTCGTGCAGTTGGGAAAAGGACACCTCGTGTTCCAGTTTACTACTCTTATAAGAAAGATGAAAGGGAAAATTATGTTTCGCCTAATAAAAGAATGTTAAAGTCGGTCTTTGATGCTAATGATGATGAAGTTGCACATGTTGCAGCACTGGCATTAACTGAGGCTGCAAAAAGAGGTGGCTCTCCTCAAGTATCCCAAACACCACACAGAAGATCACAGCAGAAGGTCTCTCCTGTTCAGAGCTGGGAAAGAATGCAACAATCTGGGACAGTTCCTGCCAAGTTTTATGACACATATTTGGATGAGGAATTCATGGAAGGTAGTATAGAAAGCAGGGGTGCTGAAAATGGGGAACAAGCTAGAGATACTAGCTCCTTGAAGGATATGGAAGGTAGTGGCACAGTTGAAGTTAATCAGAAACGAAAAAAGGTATATAGAAAGAAAGAGAGAAAGGAAAATGTTGGAAACCATCTTCTTGATGATGGCGGAGAAGCATGTAGTGGCACCGAAGAAGGACTTAATTTTAGCTTGAAGGAAAAAATTGATGTTGAGGTTACTAATGCAAAACCTCAGAAAAGGAGTAAGAAACTCTTCTTTGGAGCTGATGAAAGCTCTGCCGTGGATGCTTTGCATGCTTTGGCTGATCTGTCATTAATGATACCAGCATCTACTATGGAATCTGAATCATCTGTCCAGTTGAAGGAAGAAAGAACAACTGTTGATAAAGACGAAAAGCCTGCTGTGCCGGAAGTCACATCAACCAGCCAAAACAGAGATAAAAGTAAACTTAGTTTGAAACAGAAGGTCGTTCCTTCAGTTCGTGGAGTTGAGCTTTCATCATCCAGAAAGTCTAAAGTCGTAAGGACAACAATAAATGATAAGGAAAGTAAGGCTCTGTTTGAATCAAAAGAGCTGCTTCCCACTGATGATAAAACATGGAAAAGAAAGCGCAAACCCATGGTTCTAAAGCTGGCCAATGCAAAGCATGATTCTGATCCAAATGATCCATTAAATGATGAGGCTGTAGATGAAGAGGACAAACCATTGATTAAAGGAAAGCACACTGGTCAGACATCCACTCCAGCAAAGCAAAAGTCAGTAAGATCATCAGAAAGTTCTCTGTGTGCTGACCAGAAAGATTTGATCGTATCAACTGCAGAAGTTCAACTTGTTAGTTTACCAACTAAACGAATTAGTAAACGTAAAATGAGTTTGCAGAGAACATTTATACCCAAAGAGAAGTCTTCTGAGAACAAATTAAAAGGTCAACCTAATAAATATTCTAGCCAACCCCAAGATAAGGCATCAATTCTAAAGGAAAAGCTTTCTAGTTGCTTGTCATCTTCTATGATTCGCAGGTGGTGTGCATTTGAATGGTTTTATAGTGCAATTGATTATCCATGGTTTTCCAAACGGGAGTTCATGGAGTACTTAAATCATGTTGGACTAGGGAATATCCCAAGATTGACTCGTGTTGAATGGAGTGTCATAAAAAGTTCCCTTGGCAAACCTCGCAGATTCTCTGAACACTTCCTTCGAGAAGAAAGACAAAAGCTTGAACAGTACAGGCAATCTGTTAGGAAACATTACACTGAACTGCGGACTGGTATCAGGGATGGACTACCAACAGATTTAGCTAAGCCTTTATATGTTGGACAGCGAGTAATTGCTCTTCATCCAAAAACAAGAGAGATTCATGATGGAAGTGTGCTTACAGTTGACCACGACAAGTGCAGGGTTCAGTTTGACCTTCCTGAATTGGGTGTTGAATTTGTCATGGACATTGATTGTATGCCTTTGAATCCATTGGATAATATGCCAGAAGCTCTAAGGAGGCAGGTTGGTGCTTGTAAATTCCCTTGTATAAGTAAAGAACCACAAATGGATGGAATTTCAAGTTTTGGGGGCTGCCTGACATGCACTTCAAGCAATCCTGTAGAGAGAGCACCCAATTTGGCTAAGCAGGAAAAGCAAGCAGTGGGTGCTCAACCATGTAACATGACAGACCATCAAACCAAGGAAGCTAACATACATGCCCTTTCTGAGCTGACACGTTTTCTTGATAAAAAGGTCTCCATGGGCATAAATGAAATACTGTTAATGGAGCTTAAAAATAGCAACAATGCCATATTGGAGAACCAAATTGATAGTGGCAGCTTTAAAGATTCAGAGGCGCTCGGGAAACATTATGCCACGGTACTTGTACAGCTAAAGGAAGCCAGTGAACAGGTTTCTAATGCTCTGCTTCATCTGAGGCAACGTAATACTTACACAGGAAACTCCCTACCACTGAAACCCCAAGCAAATTTAAATGTCCATGATGGCCTTCCCGGTATGTTGGATGGTTCTCTGGCTCAAGAGTTAGGATCAACTGTTATTGAAATTATTAAAGGATCCAGGGTAAAAGCACATGCAATGGTGGATGCTGCATTTCGGGCCTTAGCTTCAGTGAAGGAAGGCGAAGATGCTTTCCTCAAGATTGGACAGGTATTGGATTCTATCAATTATCAGCAGTTGGCCCCCAACACTTCCTTGCCTGCAATGAAGTCCCAAGAGCAAGGGAATGGAAGTCTCGATAACCATACTCGATCAATTTTCTCTTCGTCTGAGCCTTTACTTGGTGATGTATCTGGTCAAAAATTGCGTAATGATTCTGACAAAGTAGACGCTCAAATTCCTTCTGAACTCATCACTTCCTGTGTTGCCATATTGATCATGATTCAGACTTGTACTGAACGACAATATCCTCCATCCGATGTGGCTCAGATATTAGATTCTGCTGTCACCAGCCTGCATCCATGCTGTCCCCAAAACCTTCCAATTTACAGGGAAATTCAAATGTGCATGGGAAGAATTAAGACCCAGATTTTAGCTCTCATCCCAACATCCACATGA 3417 0.415 MAPTRKPRSMNKRFSSLNEVSPEKEGMNSNKNKQKKKKLSDKLGSQWNKDELERFYEAYRKYGKDWKKVAAAVRNRSVEMVEALYNMNRAYLSLPEGTASVVGLIAMMTDHYNVLEESDSEKESIDSPGSRKPVKRKRGKIELGASKDSVHTQSIASNDGCLSLLKRRRFDGSQPRAVGKRTPRVPVYYSYKKDERENYVSPNKRMLKSVFDANDDEVAHVAALALTEAAKRGGSPQVSQTPHRRSQQKVSPVQSWERMQQSGTVPAKFYDTYLDEEFMEGSIESRGAENGEQARDTSSLKDMEGSGTVEVNQKRKKVYRKKERKENVGNHLLDDGGEACSGTEEGLNFSLKEKIDVEVTNAKPQKRSKKLFFGADESSAVDALHALADLSLMIPASTMESESSVQLKEERTTVDKDEKPAVPEVTSTSQNRDKSKLSLKQKVVPSVRGVELSSSRKSKVVRTTINDKESKALFESKELLPTDDKTWKRKRKPMVLKLANAKHDSDPNDPLNDEAVDEEDKPLIKGKHTGQTSTPAKQKSVRSSESSLCADQKDLIVSTAEVQLVSLPTKRISKRKMSLQRTFIPKEKSSENKLKGQPNKYSSQPQDKASILKEKLSSCLSSSMIRRWCAFEWFYSAIDYPWFSKREFMEYLNHVGLGNIPRLTRVEWSVIKSSLGKPRRFSEHFLREERQKLEQYRQSVRKHYTELRTGIRDGLPTDLAKPLYVGQRVIALHPKTREIHDGSVLTVDHDKCRVQFDLPELGVEFVMDIDCMPLNPLDNMPEALRRQVGACKFPCISKEPQMDGISSFGGCLTCTSSNPVERAPNLAKQEKQAVGAQPCNMTDHQTKEANIHALSELTRFLDKKVSMGINEILLMELKNSNNAILENQIDSGSFKDSEALGKHYATVLVQLKEASEQVSNALLHLRQRNTYTGNSLPLKPQANLNVHDGLPGMLDGSLAQELGSTVIEIIKGSRVKAHAMVDAAFRALASVKEGEDAFLKIGQVLDSINYQQLAPNTSLPAMKSQEQGNGSLDNHTRSIFSSSEPLLGDVSGQKLRNDSDKVDAQIPSELITSCVAILIMIQTCTERQYPPSDVAQILDSAVTSLHPCCPQNLPIYREIQMCMGRIKTQILALIPTST* 1139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g0408 1138 MobiDBLite consensus disorder prediction 581 608 - -
Ahy6g0408 1138 Pfam Myb-like DNA-binding domain 45 82 IPR001005 -
Ahy6g0408 1138 MobiDBLite consensus disorder prediction 116 132 - -
Ahy6g0408 1138 SUPERFAMILY Homeodomain-like 42 90 IPR009057 -
Ahy6g0408 1138 CDD SANT 47 81 IPR001005 -
Ahy6g0408 1138 SMART sant 43 91 IPR001005 -
Ahy6g0408 1138 MobiDBLite consensus disorder prediction 230 262 - -
Ahy6g0408 1138 PANTHER PROTEIN ALWAYS EARLY 1-RELATED 1 1136 IPR028306 -
Ahy6g0408 1138 MobiDBLite consensus disorder prediction 9 25 - -
Ahy6g0408 1138 PANTHER LIN-9 1 1136 IPR010561 GO:0006351|GO:0017053
Ahy6g0408 1138 MobiDBLite consensus disorder prediction 282 323 - -
Ahy6g0408 1138 MobiDBLite consensus disorder prediction 398 441 - -
Ahy6g0408 1138 MobiDBLite consensus disorder prediction 498 544 - -
Ahy6g0408 1138 MobiDBLite consensus disorder prediction 26 44 - -
Ahy6g0408 1138 MobiDBLite consensus disorder prediction 404 422 - -
Ahy6g0408 1138 MobiDBLite consensus disorder prediction 527 544 - -
Ahy6g0408 1138 ProSiteProfiles SANT domain profile. 42 79 IPR017884 -
Ahy6g0408 1138 Pfam DIRP 633 734 IPR033471 -
Ahy6g0408 1138 SMART DIRP_2 634 735 IPR033471 -
Ahy6g0408 1138 Coils Coil 908 928 - -
Ahy6g0408 1138 MobiDBLite consensus disorder prediction 233 262 - -
Ahy6g0408 1138 Gene3D - 4 99 - -
Ahy6g0408 1138 MobiDBLite consensus disorder prediction 282 299 - -
Ahy6g0408 1138 MobiDBLite consensus disorder prediction 1 44 - -
Ahy6g0408 1138 MobiDBLite consensus disorder prediction 116 139 - -
Ahy6g0408 1138 Coils Coil 686 706 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g0408 Ahy-Chr6 5061144 5071065 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Ahy6g0408 DIRP 3.40E-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g0408 - - gmx:100816217 1449.11