Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g0371 ATGGCCAGCAGATTTTGGTTTGGAAAGAAGAAAAGTAGTAGCAGCCATGGTGGCGGTTCAGAAAGGAAGTTCTCATTGGACGATGCTTCTCTCGCCGCAAAACCCAGAAGGCGAACCAGCTTCTTGTTTTCTTCTCCTTCTCCACTTCAAGGGTCGAGGCACATTGAGAGGGATAATAGACATTCCTTAACCCCAACAAGATCTGAATATTCCGTATCAAGAACACCACCACCCTTTCCCTTTCGACCCCATGATGATGATCATGATGAAGATTCATTGCCGCCACCAGCCACTTGTTTAAGCTTCAAATGGAAAAATATCTTTAAGCCATGGAAGAAGAATAATAATAATATAAGAGCATCATCACCATCAACTACTAGGCCCTCTCCTCCTTCTCCTTCTCCTCCTCCTCCTCCTCCACCTCCTCCTCCTCCGCCTCCTCCTCCGACGCCGCCAAGCCGAGGCCATGGCAACTTTAATTTTCCTCCTCTCATCGCTTTCAGATCCTTCCAAATTCGTCATGCAACCAACAATTTTAGCAGAGAGAATTTAATTGGAAGAGGTGGGTATGCTGATGTTTTCAAGGGTCGTCTGAATGGGGAAATGGTAGCTATAAAAAAATTGAACAAAGGGATTCATGCTGCAAATAAGAACATGCCTTCCTCGTCCTCGTCGTCGCCGTCATCATCGTCAAGCTTTCTGAAAGAGCTAAACATCATTGCCTACATCGACCATCCTAATACTGCAAAGCTTATTGGATACAGTTCAGAAAAGGAATTCTGCCTCGTCTTCCAACTTTCTCCACTTGGAAGCTTAGCTTCTATTCTCCATGGTCCAAATAGACACATATTAACTTGGAATAGAAGGTATAATATTGCGCTGGGAATAGCAAGAGGGCTGTTGTACTTGCATGATCATTGTCACAGGCGAATCATTCATAGAGATATTAAATCTGATAATATTCTGCTCACTAAAAATTTTGAGCCACAGATTTGTGATTTTGGACTTGCAAAGTGGTTGCCACCAGATGCTGATCAGCAACATGTCACAAGATTTGAAGGCACATTAGGGTATTCTGCTCCGGAATATTTGACACATGGCATAGTAGATGAGAAAACAGATGTTTATGCATTTGGGATTCTCTTGCTGGAGATTTTAACCGGGCGTAAGGCCTTGGATTATTTGCAACAAAGCATTTTGATATGGGCAAAGCCATTAATTAATGGTCATAATGTTAAGGAGCTTGTTGATCCATCACTTGGTGAAGATTATGACATAGAGCAGGTGGAACGTCTTCTTTTGACTGCTTCTCTCTGTGTTGAGCATTCTCCATTCTTGCGTCCTCGCATGGTTCAGGACTCTTTAAGCAGCCAACCAACCTACACACAACCCCAGCAACAAGCAACTACTGTTAAGAGTGCAGCAGGACCAACTCATGCAAATGCTGCACCAGTTACAACCAGGGTTACTAGATCCACGCTTGTAATAGCACCTCTGGTCCCAACAGTCACTCCATTTAGGCCACCAGCCCTAAGTACAACCCTCCATGTAATGCTCCAGGCAAGGTTCGAGAGATTGTTAGCAACACTTCTCGCCCGAAACCATCAAATTCAGACCAAAGCAGAAGATCTTCAGGCCACCGGCACCACTGGTTCAACAACAGTCTGGCACAATGCAGGAAGCAGCAGCTCAGGAAGTCTCCCAAAGAACAACTCCAAGTGA 1722 0.4454 MASRFWFGKKKSSSSHGGGSERKFSLDDASLAAKPRRRTSFLFSSPSPLQGSRHIERDNRHSLTPTRSEYSVSRTPPPFPFRPHDDDHDEDSLPPPATCLSFKWKNIFKPWKKNNNNIRASSPSTTRPSPPSPSPPPPPPPPPPPPPPPTPPSRGHGNFNFPPLIAFRSFQIRHATNNFSRENLIGRGGYADVFKGRLNGEMVAIKKLNKGIHAANKNMPSSSSSSPSSSSSFLKELNIIAYIDHPNTAKLIGYSSEKEFCLVFQLSPLGSLASILHGPNRHILTWNRRYNIALGIARGLLYLHDHCHRRIIHRDIKSDNILLTKNFEPQICDFGLAKWLPPDADQQHVTRFEGTLGYSAPEYLTHGIVDEKTDVYAFGILLLEILTGRKALDYLQQSILIWAKPLINGHNVKELVDPSLGEDYDIEQVERLLLTASLCVEHSPFLRPRMVQDSLSSQPTYTQPQQQATTVKSAAGPTHANAAPVTTRVTRSTLVIAPLVPTVTPFRPPALSTTLHVMLQARFERLLATLLARNHQIQTKAEDLQATGTTGSTTVWHNAGSSSSGSLPKNNSK* 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g0371 573 PANTHER OS08G0249100 PROTEIN 162 454 - -
Ahy6g0371 573 SUPERFAMILY Protein kinase-like (PK-like) 158 452 IPR011009 -
Ahy6g0371 573 MobiDBLite consensus disorder prediction 542 573 - -
Ahy6g0371 573 PANTHER RECEPTOR-LIKE CYTOSOLIC SERINE/THREONINE-KINASE 162 454 - -
Ahy6g0371 573 ProSitePatterns Serine/Threonine protein kinases active-site signature. 311 323 IPR008271 GO:0004672|GO:0006468
Ahy6g0371 573 Coils Coil 527 547 - -
Ahy6g0371 573 Gene3D Transferase(Phosphotransferase) domain 1 268 475 - -
Ahy6g0371 573 Pfam Protein kinase domain 180 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy6g0371 573 SMART serkin_6 179 446 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy6g0371 573 SUPERFAMILY Formin homology 2 domain (FH2 domain) 138 146 - -
Ahy6g0371 573 MobiDBLite consensus disorder prediction 113 160 - -
Ahy6g0371 573 MobiDBLite consensus disorder prediction 15 34 - -
Ahy6g0371 573 ProSiteProfiles Protein kinase domain profile. 179 461 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy6g0371 573 MobiDBLite consensus disorder prediction 456 485 - -
Ahy6g0371 573 Gene3D Phosphorylase Kinase; domain 1 160 266 - -
Ahy6g0371 573 MobiDBLite consensus disorder prediction 1 94 - -
Ahy6g0371 573 ProSitePatterns Protein kinases ATP-binding region signature. 185 207 IPR017441 GO:0005524
Ahy6g0371 573 MobiDBLite consensus disorder prediction 126 156 - -
Ahy6g0371 573 MobiDBLite consensus disorder prediction 456 476 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g0371 Ahy-Chr6 4551127 4564871 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g0371 167 452 Trihelix Transcription Factor Family AT1G70460 42.424 1.03e-66 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Ahy6g0371 Pkinase 3.80E-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g0371 - - adu:107491806 865.529
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0999 16 18050486 18057163 Ahy6g0371 6 4551127 4564871 hybridization
Ahy6g0371 6 4551127 4564871 Ahy9g1279 9 38531353 38560920 PCT
Ahy9g1279 9 38531353 38560920 Ahy6g0371 6 4551127 4564871 PCT