Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g0355 ATGGGTGCGCCGAAGAAGAGCGGCGGCGGAGGCAGGGTTTCCGTCACAGAGGATTCCGACGAACTGGTTCGTGTTCCGTTGCAGGCCATCCTCTTAGCTGATAGCTTCAACACCAAGTTCAGACCTATCACCCTCGAATGCCCGAAGGTCCTCTTGCCTCTTGTCAATGTTCCGATGATCAATTACACCTTGACCTGGCTCGAATCTGCCGGCGTCGAAGACGTTTTCGTTTTCTGCTGCGCCCATTCCAAGCAAGTCATCGACTATTTGGACAAATCCGGTTGGCTCTCTCAGCCTAATTTCTCCGTAACCACCATTGAATCGCACAATTCCGTCAGCGCCGGTGACGCCCTCCGCCTAATCTACGAGCGTAACGTGATTCATGGAGACTTTGTCCTCATCAGTGGTGATACTGTGAGCAACATGTCGCTTACTCAGGCACTTGCAGAGCACAAAGAAAGGAAGAAGAAGGATAGTAATGCCGTCATGACAATGGTTATCAAACGCTCAAAACTAACCCCGCTTCATCAGTCTCGGCTTGGTACCGATGAGCTTTTCATGGCCATTAATCCGGATACCAAGCAGCTTTTGTATTATGAGGAGAGGACTGACCTTTCCAAAGGGATTATGCATCTTGACAAGTCATTTCTTGCTGATAACCCTTCCCTCACCTTGCACCATGACAAGCAGGATTGTTACATTGACATCTGCTCGCCTGAAGTCCTTAGCCTGTTTACAGACAATTTTGATTACCAACATCTGCGGCGTCATTTTGTGAAGGGATTGCTTGTTGATGATATAATGGGGTACAAAATTTTCGTGCATGAAATCCACTCAAACTATGCTTCACGGATTGATAATTTCCGGAGCTATGACACTGTTAGCAGGGATATAATCCATAGATGGACGTATCCAATGGTGCCAGATGTTATGAATTATGGCAACACAGCTACTAAACTTGAACGACAGGGAATGTATCGTGCTTCAGAAATATCACAATCACAAACCGCTGTTATTGGTCCCTTCACTGTTCTAGGATTTGGCACCAAAATTGGGAATAACACTATAATTTCGGATTCCGTTATTGGAAAAGGATGTAAAATTGGATCAAACGTTCAGATTAAAGGTTGCTACATATGGGACCATGTTACCATAGAAGATGGCTGTAAACTTAACCATGCTATTGTTTGTAATGAGGTGACTTTGAAGTCAGGAGCTGTTCTGGAACCTGGTGTTATTTTGTCATTCAAGGTTGTAGTTGGGCCAGAGTTTGTTGTCCCTCCTTATTCATATGTATCACTATTACAACAGCCTGTTGAGGAAGACAGTGATGAGGAGCTTGAATATGCTGACAGTACTAGTGTCATCACAAGCAAAGTGGATAAGTCGGATGAAGAGGATGCATCTGAAGTACCAGAGGCACGTATTAGCTCTGTTTCAGAGCTAGGTATGGGTGGGGTTGGTTACATTTGGCAAAAATGTGAAGGAAGCCAGGAAGAAGAGTGGAGGCATTCAGTGGCACCTATTCCTGCAGATAAAATTTCTGAGGCAATGAAAACCATGGAAGATGATCTGGAGTTAACTCATGATGGCAGTATTCTCCCACCTTCTGGAGAGCTGATACCCGATTCTAATGACTCAGATGAAGATAATGAAGACTCCAGGGATGATTTCTTTGAGAGAGAGGTTGAAGCGACATTCCTCAGGGCTGTGAATGAAAACATACAAGAAGACCACTTGATCTTAGAAGTTAACTCTTTGAAGTTGTCATGCAATAAGCTGACTGCTGATTGTGCGGGAGCTGTGTTTTATGCTATGATGAAGTATGCGGTAGACACTCCCCATAGTTCACTTGATGGCTTGATGCAGAATGTTAAGGCTGTTCTATCAAAATGGAAAAAGGCTCTTACATCCTATTTGACAGACATAGATGAGCAGATTGAGATCATACTGAAATTTGAAGAAATTTGTTTAGAATCTGCTAAGGAGTTTGCCCCATTATTCACCAAGATTTTGCACTACATGTATAAAGAGGATATTATTGAAGAAGATGCTATTTTAAGTTGGGAAGATGAGAAGAGAGATGCAGATGAGGCAGATAAAGTATTTGTTAACAAGGCTCAAGATTTGATCCAATGGCTAAAAGTGGCTGAAGAAGAAGATGAATAG 2169 0.4334 MGAPKKSGGGGRVSVTEDSDELVRVPLQAILLADSFNTKFRPITLECPKVLLPLVNVPMINYTLTWLESAGVEDVFVFCCAHSKQVIDYLDKSGWLSQPNFSVTTIESHNSVSAGDALRLIYERNVIHGDFVLISGDTVSNMSLTQALAEHKERKKKDSNAVMTMVIKRSKLTPLHQSRLGTDELFMAINPDTKQLLYYEERTDLSKGIMHLDKSFLADNPSLTLHHDKQDCYIDICSPEVLSLFTDNFDYQHLRRHFVKGLLVDDIMGYKIFVHEIHSNYASRIDNFRSYDTVSRDIIHRWTYPMVPDVMNYGNTATKLERQGMYRASEISQSQTAVIGPFTVLGFGTKIGNNTIISDSVIGKGCKIGSNVQIKGCYIWDHVTIEDGCKLNHAIVCNEVTLKSGAVLEPGVILSFKVVVGPEFVVPPYSYVSLLQQPVEEDSDEELEYADSTSVITSKVDKSDEEDASEVPEARISSVSELGMGGVGYIWQKCEGSQEEEWRHSVAPIPADKISEAMKTMEDDLELTHDGSILPPSGELIPDSNDSDEDNEDSRDDFFEREVEATFLRAVNENIQEDHLILEVNSLKLSCNKLTADCAGAVFYAMMKYAVDTPHSSLDGLMQNVKAVLSKWKKALTSYLTDIDEQIEIILKFEEICLESAKEFAPLFTKILHYMYKEDIIEEDAILSWEDEKRDADEADKVFVNKAQDLIQWLKVAEEEDE* 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g0355 722 SMART 542_3 633 720 IPR003307 GO:0005515
Ahy6g0355 722 CDD LbH_eIF2B_epsilon 344 422 - -
Ahy6g0355 722 Gene3D Hexapeptide repeat proteins 322 461 - -
Ahy6g0355 722 Pfam eIF4-gamma/eIF5/eIF2-epsilon 645 722 IPR003307 GO:0005515
Ahy6g0355 722 ProSiteProfiles W2 domain profile. 553 722 IPR003307 GO:0005515
Ahy6g0355 722 SUPERFAMILY ARM repeat 559 718 IPR016024 -
Ahy6g0355 722 SUPERFAMILY Trimeric LpxA-like enzymes 271 432 IPR011004 -
Ahy6g0355 722 SUPERFAMILY Nucleotide-diphospho-sugar transferases 24 372 IPR029044 -
Ahy6g0355 722 MobiDBLite consensus disorder prediction 528 556 - -
Ahy6g0355 722 CDD eIF-2B_epsilon_N 27 242 IPR035543 -
Ahy6g0355 722 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT EPSILON 15 721 - -
Ahy6g0355 722 CDD W2_eIF2B_epsilon 556 722 IPR044123 GO:0005085|GO:0031369
Ahy6g0355 722 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 16 306 IPR029044 -
Ahy6g0355 722 Pfam Nucleotidyl transferase 29 165 IPR005835 GO:0009058|GO:0016779
Ahy6g0355 722 Gene3D - 546 722 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g0355 Ahy-Chr6 4397818 4403832 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g0355 1 717 Eukaryotic Initiation Factors Gene Family AT2G34970 61.379 0.0 890
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g0355 K03240 - gmx:100784894 1165.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g1018 16 18383524 18389765 Ahy6g0355 6 4397818 4403832 hybridization