Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g0353 ATGGGGTGTGTGATTAGCAGGGAGGTTTCTTCTGGAATAATCGCAGAGGTGAAAGAGGAGAAGAGTTTCGGTGCTGATTCTAAGAGTAATAATAATGTTGATGGAGTCGCGGTAGAGGTTCAGAATCAGAATCGGAATCACAATGGTGGTAACCACCACAAGGAAGAGAAGAGTGGCAGCGAAGTTCAGAAGCCGAGGGGAGAAAGGAGAAGATCGAAGAAACCGAATCCGCGGCTAAGCAATCCTCCCAAGCATTTAAGGGGTGAGCAGGTTGCGGCTGGCTGGCCACCCTGGCTCACCGCCGTGTGCGGCGAAGCGCTTAACGGCTGGATTCCCCGAAAGGCTGACACATTTGAGAAGATTGATAAGATCGGGCAAGGAACATATAGTAATGTATACAAAGCTAAAGACATGATGACAGGCAAAATTGTTGCTCTAAAGAAGGTTCGATTTGATAATTTGGAACCTGAGAGTGTAAAATTCATGGCTAGAGAGATTCTTATTTTGCGGAGATTGGATCATCCAAATGTTGTAAAGTTGCAAGGCTTAGTTACATCAAGGATGTCCTGCAGTCTGTATTTGGTGTTTGATTACATGGTGCATGATTTAGCTGGACTTGTTGCAAGCCCACGAATCAGGTTCACGGAACCTCAGGTCAAATGTTACATGCATCAACTGCTATCTGGACTTGAGCATTGTCATAAGCGTCGTGTACTTCACCGTGATATTAAAGGATCAAATCTTCTCATTGACAATGAAGGAATACTTAAGATTGCTGACTTTGGACTGGCATCTTTGTTCGATCCAAACCATAAGCATCCCATGACTAGTCGAGTGGTAACTCTTTGGTACCGGCCCCCAGAATTGCTTCTTGGTGCCACCGATTATGGTGTGGGTATAGACCTATGGAGCGCCGGATGCATTTTAGGAGAGTTATTGGCTGGAAAGCCAATTATGCCGGGTCGTACAGAGGTGGAGCAACTGCATAAGATATACAAACTATGTGGTTCACCTTCTGATGAATATTGGAAGAAGTCGAAGTTGCCTAATGCCACCTTGTTTAAGCCTCGAGAGCCATACAAGAGATGCCTAAGAGAGACATTTAAAGATTTTCCACCTTCTGCACTACCCCTTATCGAAAGTCTTCTGGCATTTGATCCTGCCGAACGGAAAACTGCCTCAGATGCTTTGCGAAGTGAGTTCTTCACCACAGAGCCATATGCTTGTGATCCTTCAAGTCTTCCAAAATATCCTCCAAGCAAGGAAATGGATGCTAGACGGCAGGACGAAGAGGCCAGAAGAATAAGGGCTGCAAGCAAAGCTCAGGCTAATGGTCCAAGGAAGCATCGCATGCGTGATCGTGCCGTGAAAGCTATTCCTGCTCCTGAAGCCAATGCTGAGATTCAATCCAACATTGATAGAAGGCGTCTAATAACTCATGCAAATGCTAAGAGCAAGAGTGAAAAGTTCCCACCGCCACATCAAGATGGACAACTTGGATTTCCATTGGGATCTTCCCATCGTATTGATCCAGATACTGTTCCTATTGATGTCTCCTTCACTTCAACAACGTCGTATATTTATTCAAAGGAACCATTCCAAGCGTGGTCAGGTCCTATAGGTAATGCTGCTGCTGAAATTGGAGTGCCAAAAAACAAGAGACACACCGCAACTGATGCATTGGATTTATCAAAACCACATAAAGGTTCACACAAGGATAAAGTTAAAGGAAAGAAAACCATAGCTTAG 1749 0.4483 MGCVISREVSSGIIAEVKEEKSFGADSKSNNNVDGVAVEVQNQNRNHNGGNHHKEEKSGSEVQKPRGERRRSKKPNPRLSNPPKHLRGEQVAAGWPPWLTAVCGEALNGWIPRKADTFEKIDKIGQGTYSNVYKAKDMMTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVVKLQGLVTSRMSCSLYLVFDYMVHDLAGLVASPRIRFTEPQVKCYMHQLLSGLEHCHKRRVLHRDIKGSNLLIDNEGILKIADFGLASLFDPNHKHPMTSRVVTLWYRPPELLLGATDYGVGIDLWSAGCILGELLAGKPIMPGRTEVEQLHKIYKLCGSPSDEYWKKSKLPNATLFKPREPYKRCLRETFKDFPPSALPLIESLLAFDPAERKTASDALRSEFFTTEPYACDPSSLPKYPPSKEMDARRQDEEARRIRAASKAQANGPRKHRMRDRAVKAIPAPEANAEIQSNIDRRRLITHANAKSKSEKFPPPHQDGQLGFPLGSSHRIDPDTVPIDVSFTSTTSYIYSKEPFQAWSGPIGNAAAEIGVPKNKRHTATDALDLSKPHKGSHKDKVKGKKTIA* 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g0353 582 ProSitePatterns Protein kinases ATP-binding region signature. 124 147 IPR017441 GO:0005524
Ahy6g0353 582 PANTHER OS01G0367700 PROTEIN 53 555 - -
Ahy6g0353 582 Pfam Protein kinase domain 118 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy6g0353 582 MobiDBLite consensus disorder prediction 551 582 - -
Ahy6g0353 582 MobiDBLite consensus disorder prediction 420 437 - -
Ahy6g0353 582 SUPERFAMILY Protein kinase-like (PK-like) 112 409 IPR011009 -
Ahy6g0353 582 MobiDBLite consensus disorder prediction 410 452 - -
Ahy6g0353 582 CDD STKc_CDK9_like 118 402 - -
Ahy6g0353 582 ProSitePatterns Serine/Threonine protein kinases active-site signature. 238 250 IPR008271 GO:0004672|GO:0006468
Ahy6g0353 582 SMART serkin_6 118 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy6g0353 582 ProSiteProfiles Protein kinase domain profile. 118 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy6g0353 582 MobiDBLite consensus disorder prediction 48 68 - -
Ahy6g0353 582 PANTHER CELL DIVISION PROTEIN KINASE 53 555 - -
Ahy6g0353 582 Gene3D Phosphorylase Kinase; domain 1 105 200 - -
Ahy6g0353 582 Gene3D Transferase(Phosphotransferase) domain 1 201 442 - -
Ahy6g0353 582 MobiDBLite consensus disorder prediction 18 90 - -
Ahy6g0353 582 MobiDBLite consensus disorder prediction 26 47 - -
Ahy6g0353 582 MobiDBLite consensus disorder prediction 552 569 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g0353 Ahy-Chr6 4372625 4376693 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g0353 110 442 Core Cell Cycle Gene Families AT5G10270 52.722 1.09e-121 367
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Ahy6g0353 Pkinase 3.00E-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g0353 K08819 - gmx:100786837 999.964
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g1020 16 18440122 18444222 Ahy6g0353 6 4372625 4376693 hybridization
Ahy6g0353 6 4372625 4376693 Ahy19g1606 19 52437251 52444281 PCT
Ahy6g0353 6 4372625 4376693 Ahy9g1299 9 40851622 40857411 PCT
Ahy19g1606 19 52437251 52444281 Ahy6g0353 6 4372625 4376693 PCT
Ahy9g1299 9 40851622 40857411 Ahy6g0353 6 4372625 4376693 PCT