Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g0342 ATGACTTCACTATCATCGTCTCCCTCTTTAGTCTTTACAGTCCGAAGGCGCCAACCGGAGCTGGTGGCTCCAGCTACGCCCACTCCCCGCGAAGTTAAACTATTATCTGACATAGATGATCAAGAAGGGTTGCGTTTCCATATTCCATTCTTTCATATTTATCAACACAAGCCATCTATGGAAGGAAAAGACCCAGTTAGGATTATAAGAGATGCACTCTCGAGAACACTTGTGTTTTACTACCCATTTGCCGGCAGGATCAGGGAAGGTCATGGCCGCAAGTTGATGGTGGATTGTACCGAGGAGGGTGTCTTGTTTATTGAGGCAGATGCTGACGTAACACTTGATCAACTTCGTGGCTCTCTTCATCCTCCATTCCCATGCTCCCAAGAACTCCTTTATAATGTTCCAGGCTCCGATGGAATTGTCAACTGCCCCCTTCTACTCATACAGGTGACACGCTTTAAGTGCGGCGGTTTTGTTTTTGCCATACGCGTGAATCACACGATGATGGATGCAACTGGTCTAGTACAATTTGTGAGTGCTTTAACTGAAATGGCTCAAGGTGCTCATCAACCTTCCATTCTGCCTGTATGGCAAAGGGAGCTCCTACTTGCAAGAGACCCACCACAAATCACATGCAACCATCGCGAATATGAGCAACTTCCAAATACCAAAGAAGGGACCATCATTTCTTATGAGAACAATATGGTTCAACGCTCCTTTTTCTTTGGACCAACTGAAATAGCATCCCTTCGTCGTTTGGTTCCACGTCACCTTGGCCAATGCACTCGATTTGAGCTTATAACTGTATGCTTATGGCGTTGCCGTACAAAAGCATTGCAACTTGCGCCAGAAGATGATGTTCGCATGATGTGCATCGTGAATGCACGCGCTAGGTTTAACCCTACTATACCCCTTGGTTATTACGGAAACGCTTTTGTTTATCCGGCAGCAGTTTCTAGTGTAAGGAAGCTTTGTGAAAATCCCTTTTATTATGCCGTAGAGTTAATAAAGAAAGTAAAAACTGAGGTGACAGAAGAGTACGTGCATTCAGTGGCAGATCTAATGGTTACAAAAGGACGACCCTTATTTACAACCGTAGGATCTTTTATTGTGTCAAACTTGACACGTTTTGGGTTAAGAGAAGCAGATTTTGGATGGGGCAAAGCATTATATGCTGGTGTGTCTCAAGGTGGAGTTGGGCCGGCTTTTCATGGAGTAACCTTTTTTATGGATTATGAGAATGAAAAAGGAGAAGAAGGCGTATTATTTCCAATTTACTTGCCTTCCAAAGCTATGGAGAGATTTGAGAAAGAGTTAGGTGATTTGTTTGGTGGGGACCTTAAGAGTATCTTTAATATTTGA 1368 0.4371 MTSLSSSPSLVFTVRRRQPELVAPATPTPREVKLLSDIDDQEGLRFHIPFFHIYQHKPSMEGKDPVRIIRDALSRTLVFYYPFAGRIREGHGRKLMVDCTEEGVLFIEADADVTLDQLRGSLHPPFPCSQELLYNVPGSDGIVNCPLLLIQVTRFKCGGFVFAIRVNHTMMDATGLVQFVSALTEMAQGAHQPSILPVWQRELLLARDPPQITCNHREYEQLPNTKEGTIISYENNMVQRSFFFGPTEIASLRRLVPRHLGQCTRFELITVCLWRCRTKALQLAPEDDVRMMCIVNARARFNPTIPLGYYGNAFVYPAAVSSVRKLCENPFYYAVELIKKVKTEVTEEYVHSVADLMVTKGRPLFTTVGSFIVSNLTRFGLREADFGWGKALYAGVSQGGVGPAFHGVTFFMDYENEKGEEGVLFPIYLPSKAMERFEKELGDLFGGDLKSIFNI* 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g0342 455 Pfam Transferase family 14 441 - -
Ahy6g0342 455 Gene3D - 13 220 IPR023213 -
Ahy6g0342 455 PANTHER ALCOHOL ACYLTRANSFERASE 12 445 - -
Ahy6g0342 455 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 12 445 - -
Ahy6g0342 455 Gene3D - 221 441 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g0342 Ahy-Chr6 4223254 4227607 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g0342 14 441 Monolignol Biosynthesis Gene Families AT5G48930 28.636 4.67e-49 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g0342 K19861 - gmx:100787907 640.958