Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g0328 ATGTTCGATGGATTGCCATCATCATCAGAACACTTCCACCAATTCATAACACCAAGGACCACTACTTCTACTACTCTTCCTCTTCCTCATCATCATCATCATCATCATCATCACTTATCACCATCATCATCATCATCATCTTCGTCCTTCTCCCCACTACTCCATCATCATGCTTCTCTAACCCCCATCAACACCAACACCTTCTTACCATTTGACCCTTATAACCCTCATCATCATCAACAACAACAACCAAATGCCACGTTTTCTTCAGTACTCAATAACAATAACTTGTTCCACACTAGTGCTACTGATGCAAGAGTTCAAACACAGGTATTACCAAACGACTTGATTGATTCTTCCTGGAGCAACGATGAAGTTGTTGCACTCTTGAGGATCAGATCAACCATGGACACTACTTGGTTCCCTCAACTCACTTATTGGGACCATGTCTCTAGAAAGCTAGGAGAGCTTGGATTCAAGAAGAGTGGTGACAAGTGCAAGGAAAAATTCGAAGACGAGACAAGATATTTCAACAACTACGCCAAGAACAATAGTTACCGATTTCTTAATGAGCTTGAAGAGTTCTATCAAGGTGATAATCATAATGAAAACCCTATGGTAGATAACCAAGATCATGTTGTGACTGAAAAGACTCAAGAGTTTGAACACCCAATGAATGCCGGAGGAGGCGATATAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGAGGAGGAAGAGGAAAGTTCAAGAGATGGCAAATCAGTGAAAGAACAATGTGAAGAAGACAATGAGAGTGAGAAGAAGATGAAGATGAAGAGGAAGAGGAAGAGGCGTTGCAGGTTTGAGATGTTGAAGGGTTTCTGTGAGAGCATTGTGAACAACATGATGGCTCAACAAGAAGAGATACATAACAAGCTCATTGAAGACATGCTGAGAAGAGATGAAGAGAAGCTTCAAAGAGAGGAAGCATGGAAGAAGCAAGAGACTGAAAGGATGAACAAGGAGCTTCAGATTATGGCCCAAGAACAAGCCATTGCAGGTGATAGGCAAGCTTCCATCATTGAATTCTTGAAGAAATATGCAGCAACAAACCCTAATAATAATGAACCAACACCTTCTTCTTCAAAACTGATTATTCCATCAAGTCATCAATTTCAAATTCCACCATTATCAGCAGAAAACCCTAGCTCTATGAGTGACACATTATTACAACAAGTACATTCTTCTTCCACCCATTCATCTCCAGCTTCCCACAACAACACTACTAGTTCTTCCTCCCTCAACCGCCACGATAACTATCACTCAAATTTGCTTGTTAAGCCGTTAGTAACAGATCAGAAGGAGAATAATGTTGGGAGAAGATGGCCAAGAGATGAAGTTTTGGCTCTCATAAACCTTAGATGTGAGAGCATTAAGATGAATAATAATGCTGAAGAGAGGGAAAGTGGGAACAATAATAAGATTCCTCTATGGGAAAGAATCTCACAAGGGATGTCAGATTTGGGATACAAGAGAAGTGCAAAGAGGTGCAAAGAGAAATGGGAGAACATAAACAAGTACTTCAGAAAAACCAAGGATGTTAATAAGAAAAGGTCCATTGATTCAAGGACTTGTCCCTACTTCCATCAACTCAAGAGTCTCTATGATGAAGGAAAGCTTGTTCATCAACCGGAGACGACCACGCCGGAAAACCATTCCGGGCAACTTCTTCCTCCTTCTGATCAGGTGGGGTCTGGTGGCGGTTTCAGTGATGATCATGAGAAAACTTTGATACAAGAGCCACCATTGAATTTTGGTTAG 1800 0.4094 MFDGLPSSSEHFHQFITPRTTTSTTLPLPHHHHHHHHHLSPSSSSSSSSFSPLLHHHASLTPINTNTFLPFDPYNPHHHQQQQPNATFSSVLNNNNLFHTSATDARVQTQVLPNDLIDSSWSNDEVVALLRIRSTMDTTWFPQLTYWDHVSRKLGELGFKKSGDKCKEKFEDETRYFNNYAKNNSYRFLNELEEFYQGDNHNENPMVDNQDHVVTEKTQEFEHPMNAGGGDIEEEEEEEEEEEEEEESSRDGKSVKEQCEEDNESEKKMKMKRKRKRRCRFEMLKGFCESIVNNMMAQQEEIHNKLIEDMLRRDEEKLQREEAWKKQETERMNKELQIMAQEQAIAGDRQASIIEFLKKYAATNPNNNEPTPSSSKLIIPSSHQFQIPPLSAENPSSMSDTLLQQVHSSSTHSSPASHNNTTSSSSLNRHDNYHSNLLVKPLVTDQKENNVGRRWPRDEVLALINLRCESIKMNNNAEERESGNNNKIPLWERISQGMSDLGYKRSAKRCKEKWENINKYFRKTKDVNKKRSIDSRTCPYFHQLKSLYDEGKLVHQPETTTPENHSGQLLPPSDQVGSGGGFSDDHEKTLIQEPPLNFG* 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g0328 599 CDD GT1 453 525 - -
Ahy6g0328 599 MobiDBLite consensus disorder prediction 231 248 - -
Ahy6g0328 599 Coils Coil 225 252 - -
Ahy6g0328 599 PANTHER TRIHELIX TRANSCRIPTION FACTOR GTL2 43 563 - -
Ahy6g0328 599 Pfam Myb/SANT-like DNA-binding domain 119 184 IPR044822 -
Ahy6g0328 599 Pfam Myb/SANT-like DNA-binding domain 453 547 IPR044822 -
Ahy6g0328 599 SMART sant 117 176 IPR001005 -
Ahy6g0328 599 SMART sant 451 520 IPR001005 -
Ahy6g0328 599 MobiDBLite consensus disorder prediction 556 599 - -
Ahy6g0328 599 MobiDBLite consensus disorder prediction 249 269 - -
Ahy6g0328 599 MobiDBLite consensus disorder prediction 557 573 - -
Ahy6g0328 599 MobiDBLite consensus disorder prediction 21 51 - -
Ahy6g0328 599 Gene3D - 121 179 - -
Ahy6g0328 599 Gene3D - 455 523 - -
Ahy6g0328 599 ProSiteProfiles Myb-like domain profile. 113 174 IPR001005 -
Ahy6g0328 599 ProSiteProfiles Myb-like domain profile. 447 518 IPR001005 -
Ahy6g0328 599 MobiDBLite consensus disorder prediction 386 431 - -
Ahy6g0328 599 MobiDBLite consensus disorder prediction 221 272 - -
Ahy6g0328 599 PANTHER - 43 563 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g0328 Ahy-Chr6 4078149 4080941 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g0328 121 550 Trihelix Transcription Factor Family AT5G28300 42.650 7.31e-90 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Ahy6g0328 Myb_DNA-bind_4 6.70E-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g0328 - - aip:107645832 1029.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g1052 16 18951492 18954351 Ahy6g0328 6 4078149 4080941 hybridization