Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g0322 ATGGAACATCCACAGACCCCTTATCATACCAAAACCCTTCCTGCTGAATTCTTCAAAGTTTACTTGCCCCAAACGAGTTCTACTCTCTTGCGCATACCAAAGGCTTTCAGTGCCAAGTTCAGCAATGGAAATATAGGAAGAAAGACTGCTCTTGTGGATCATGAAGGAAACTCTTGGGATGTTGAGTTAAAGAAGATGGATGATGGATTATTGGTCCTCAAGAATGGATGGAAAAAGTTTGTTAGAGACAAGTGTTTGGAACAAGCTGATTTCTTGGTCTTTGAGTATGATGGCAACTCCAAGTTTCATGTGAAGATATTTTCCAAAAGTGGATGCAGAAAAGAAGCTGCAATTAGTGGGAAATTTAACCCCGTTATGATCTCGGATGATGAAGATTCTGATCTGCAGAATAGTAAAAGAAAGCATGAGCGTGGCGTTAAAAGGAAACTTTCACCAATCACGCCACTCAAATTAAACCAGAAATCTCACTCAAAAAAGGGAACTACTGTACGGAAATCCAAAAGAGTTAAGAATGGGGCAAATGGTAGCAACTGTGAGAGCAAGGCATCTGGCCTTGTGAAGTTCGTTCCCCTGAAGAACCCTCATTTTGTGACACCTATGTCACACTGGAGAATGAGGAAAATGGAAATTCCTAGAAGAGTAACAAAGGAATTGAACATCAGCCTAAAATCAGGGATTATGCTGAGAGACGAGGATGACAAGCTATGGCCGGTGAAGATCCTCACCGGGGATCGCGGACGCTGCTATTTTGCAAAAGGGTGGTCTAGTTTCTGGAAGGCTAAAAGTGTTGAAGAGGGCAACCTTTGTGATTTCAAGTTTGTTGTTGGCAAAGAGAATAGAGCTGAGGAACTGCTTGTGCGAGTACACTCGCATTAA 897 0.4225 MEHPQTPYHTKTLPAEFFKVYLPQTSSTLLRIPKAFSAKFSNGNIGRKTALVDHEGNSWDVELKKMDDGLLVLKNGWKKFVRDKCLEQADFLVFEYDGNSKFHVKIFSKSGCRKEAAISGKFNPVMISDDEDSDLQNSKRKHERGVKRKLSPITPLKLNQKSHSKKGTTVRKSKRVKNGANGSNCESKASGLVKFVPLKNPHFVTPMSHWRMRKMEIPRRVTKELNISLKSGIMLRDEDDKLWPVKILTGDRGRCYFAKGWSSFWKAKSVEEGNLCDFKFVVGKENRAEELLVRVHSH* 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g0322 298 CDD B3_DNA 201 297 IPR003340 GO:0003677
Ahy6g0322 298 MobiDBLite consensus disorder prediction 129 185 - -
Ahy6g0322 298 Gene3D - 10 112 IPR015300 -
Ahy6g0322 298 CDD B3_DNA 17 108 IPR003340 GO:0003677
Ahy6g0322 298 SUPERFAMILY DNA-binding pseudobarrel domain 4 115 IPR015300 -
Ahy6g0322 298 Pfam B3 DNA binding domain 17 109 IPR003340 GO:0003677
Ahy6g0322 298 Pfam B3 DNA binding domain 205 295 IPR003340 GO:0003677
Ahy6g0322 298 ProSiteProfiles B3 DNA-binding domain profile. 200 298 IPR003340 GO:0003677
Ahy6g0322 298 ProSiteProfiles B3 DNA-binding domain profile. 15 110 IPR003340 GO:0003677
Ahy6g0322 298 SMART B3_2 17 110 IPR003340 GO:0003677
Ahy6g0322 298 SMART B3_2 203 289 IPR003340 GO:0003677
Ahy6g0322 298 PANTHER B3 DOMAIN-CONTAINING 15 286 - -
Ahy6g0322 298 SUPERFAMILY DNA-binding pseudobarrel domain 198 281 IPR015300 -
Ahy6g0322 298 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS01G0723500-LIKE ISOFORM X1 15 286 - -
Ahy6g0322 298 Gene3D - 183 297 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g0322 Ahy-Chr6 4003345 4005881 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g0322 16 297 B3 DNA Binding Superfamily AT5G66980 32.362 1.85e-37 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Ahy6g0322 B3 4.10E-12 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g0322 - - ahf:112695440 613.994
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g1059 16 19084898 19086926 Ahy6g0322 6 4003345 4005881 hybridization