Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g0302 ATGGTTATGGCGAAGGTGAAGAGGCAGAAGCTGCAAGCATGCATCACGTGCCCACTCTGCCACAAACTCCTCCGAGACGCCACCACCATCTCCCTCTGCCTTCACACTTTTTGCAGGAAGTGCATATATAAGAAGCTTTCAGATGATGAGATGGATTGTTGTCCAGTATGTTATGTTGATCTCGGATGCCTTCCATTCCAAAAACTCAGGCCAGACCACAATTTGCAAGATATTAGGGCCAAAATATTCCCTTTTAGGCGAAGAAAAATCGATGCTCTTCAAGTTGTTTTGCCTGCAAAGAGGAAGGAAAGATCACTTTCATCATTGGTGGTTAATGCTCCCAAGGTTTCAAATCAGACTGGCTTCACAGCCAAGAGAACAAAATCTGGCATAAGAAAGGCAGCTGAAGAAACATATGGTGAAGATAATCTGGGTTCTTTTGTAGCTGAGAAGAGGCCCAATGAAGATACAGAAAACAGTATGGAACTTGCAGAAGGGAAGGGTGATCTCTGGACGCCCTTGAACTGTCTCGTTGAAGCTGCCAATCGAACAAAGTCCTCCAAATCAAACTCACAAGGGACTCCTCATGCCAAGTTAGAGTCTCCATCAACTGCTTATGGTGGACTAGACATGGCTGCAACCACAACCAAATCAGACCTACCTACTTCATTGAAGAGTGCTTTTCACATGGCTAAAACTAAAATCAAGGATAATAGACATAAAAGGTTTGGAGCTGACAAGGAGGGACACACCCTGCATTCAGGACCTGCAGTGAAGCAAAAAAGGCCGCTGCGTCCTGGTCAGGAAAGAGCAGAAGCATCTGAGACATCTGCCTCAGATACAACAGGGAGCAGGAAGGGAGATGTTCCTTTGCCACAGATTTCAGCATGTTATTTAAGAATAAAGGATGGTACTGTGCCTGTCTCATTTATACAAAAGTATCTTGTGAAGAAACTTAATCTAACAAATGAAGCAGAGGTGGAAATAATGTGCCGGGGTCAGCCTGTGTTGCCAAATTTGCAGCTGCATAACTTAGTAGACTTGTGGTTCTGCTCAGGTTCAACCACAAAGAAGATGCCGGCATCTGTGGGCTCCTCAGCTAAGGACTTTGTCATGGTTTTATCATATTGTCGAAAGGTCGTACCTCATTGA 1152 0.4462 MVMAKVKRQKLQACITCPLCHKLLRDATTISLCLHTFCRKCIYKKLSDDEMDCCPVCYVDLGCLPFQKLRPDHNLQDIRAKIFPFRRRKIDALQVVLPAKRKERSLSSLVVNAPKVSNQTGFTAKRTKSGIRKAAEETYGEDNLGSFVAEKRPNEDTENSMELAEGKGDLWTPLNCLVEAANRTKSSKSNSQGTPHAKLESPSTAYGGLDMAATTTKSDLPTSLKSAFHMAKTKIKDNRHKRFGADKEGHTLHSGPAVKQKRPLRPGQERAEASETSASDTTGSRKGDVPLPQISACYLRIKDGTVPVSFIQKYLVKKLNLTNEAEVEIMCRGQPVLPNLQLHNLVDLWFCSGSTTKKMPASVGSSAKDFVMVLSYCRKVVPH* 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g0302 383 SUPERFAMILY RING/U-box 11 81 - -
Ahy6g0302 383 MobiDBLite consensus disorder prediction 245 288 - -
Ahy6g0302 383 PANTHER E3 UBIQUITIN PROTEIN LIGASE DRIP1 148 279 IPR044807 GO:0004842
Ahy6g0302 383 Pfam Zinc finger, C3HC4 type (RING finger) 17 57 - -
Ahy6g0302 383 ProSitePatterns Zinc finger RING-type signature. 33 42 IPR017907 -
Ahy6g0302 383 PANTHER E3 UBIQUITIN PROTEIN LIGASE DRIP1 3 136 IPR044807 GO:0004842
Ahy6g0302 383 PANTHER E3 UBIQUITIN PROTEIN LIGASE DRIP1 284 381 IPR044807 GO:0004842
Ahy6g0302 383 ProSiteProfiles Zinc finger RING-type profile. 17 57 IPR001841 -
Ahy6g0302 383 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 2 110 IPR013083 -
Ahy6g0302 383 PANTHER UBIQUITIN PROTEIN LIGASE DRIP2, PUTATIVE-RELATED 3 136 - -
Ahy6g0302 383 PANTHER UBIQUITIN PROTEIN LIGASE DRIP2, PUTATIVE-RELATED 284 381 - -
Ahy6g0302 383 MobiDBLite consensus disorder prediction 183 209 - -
Ahy6g0302 383 MobiDBLite consensus disorder prediction 183 199 - -
Ahy6g0302 383 SMART ring_2 17 57 IPR001841 -
Ahy6g0302 383 MobiDBLite consensus disorder prediction 272 288 - -
Ahy6g0302 383 Gene3D - 268 360 - -
Ahy6g0302 383 PANTHER UBIQUITIN PROTEIN LIGASE DRIP2, PUTATIVE-RELATED 148 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g0302 Ahy-Chr6 3769845 3773109 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g0302 2 302 C3H Transcription Factor Family AT2G30580 40.346 4.98e-68 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g0302 K16277 - gmx:100783999 520.39