Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g0293 ATGGAAGCTCCTGCTGGCGGAGTGGATGATATGACCAAGCTCTCGTATTTGCACGAGCCTGGAGTCTTGCAGAACTTGAAAAGTAGATATGAATTGAATGAAATATATACATACACTGGAAACATTCTGATTGCTATAAATCCATTCCAAAGGCTACCTCACATTTACGATGCACACATGATGCAACAATACAAGGGAGCACCGTTTGGTGAATTAAGCCCTCATGTATTTGCAGTTGCTGATGTTGCTTACAGGGCTATGATTAACGAAGGAAAAAGCAATTCAATTCTTGTCAGTGGAGAAAGTGGAGCCGGTAAAACTGAAACTACGAAAATGCTTATGCGATACCTTGCTTATTTAGGAGGAAGGGCTGCCACCGAAGGAAGAACAGTTGAACAGCAAGTTCTTGAATCAAATCCAGTTTTAGAAGCCTTTGGAAATGCTAAAACTGTGAGGAACAACAATTCGAGTCGATTTGGTAAATTCGTTGAGATCCAATTTGATAAGAATGGAAGAATCTCAGGAGCAGCCATTAGAACATACCTTCTAGAAAGATCTAGGGTTTGTCAAGTAAATGATCCTGAACGCAATTACCACTGCTTCTATCTTCTCTGTGCTGCACCGCAGGAGGAAGTTGAGAAATACAAATTAGGACATCCTAAAACATTTCATTACCTTAATCAGTCAAAATGTTATGAACTGGCCGATATAAGCGATGCTCGCGAGTATCTTGCCACTAGAAGAGCTATGGACATTGTTGGAATAAGCCAAAAGGATCAGGAAGCAATTTTCAGAGTAGTTGCTGCTATTCTTCATCTTGGTAACATTGCGTTTACCAAAGGAAAGGAAGCTGATTCATCTGTTCCAAAAGATGATAAAGCCAAATTCCACCTGAAAACCACTGCTGAGCTTCTCATGTGTGATCTTGCTGGTTTGGAAGATGCATTAGTGAAGCGTGTGATGATCACCCCAGAGGAAGTTATTAAACGGAGCCTCGATCCGGCAAGCGCAGCAATAAGCAGAGATGGCTTGGCGAAAACAATATATTCTAGACTCTTTGACTGGTTGGTGGACAAGATTAACAATTCGATCGGACAAGACGCGACTTCTAAATGTTTGATTGGAGTCCTTGATATCTATGGCTTTGAAAGCTTTAAAACCAACAGCTTTGAGCAGTTTTGCATTAATTTCACAAATGAGAAGTTGCAGCAACATTTCAATCAGCACGTATTTAAAATGGAACAAGAAGAATATACAAAGGAGGAGATCAATTGGAGCTACATTGAATTTGTTGACAACCAAGATGTTTTGGACCTTATTGAAAAGAAACCTGGTGGAATCATTGCTCTCCTTGATGAAGCTTGCATGTTTCCAAAGTCAACACATGAAACGTTTTCAAACAAACTGTATCAGACATTTAAGAATCATAAGCGCTTCATTAAGCCAAAATTGTCTCGGACAGATTTCACTATTTCTCATTATGCAGGCGAGGTGCAATACCAGTCTGATCAATTTCTAGACAAAAACAAGGATTATGTTGTCCCTGAGTATCAAGATTTGCTGGGTGCTTCCAAATGTTCTTTTGTAGCTGGCCTTTTTCCTCCACTTCCAGAAGAGACATCAAAATCTTCCAAATTTTCTTCAATTGGTTCTCGCTTTAAGCTACAACTGCAGTCACTGATGGATACATTAAACTCTACAGAGCCTCATTACATTAGATGTGTGAAACCAAACAACCTCCTGAAGCCTGCAATTTTTGAGAATCAAAACATTATGCAACAACTTCGTTGTGGTGGTGTTTTAGAGGCAATCAGAATTAGTTGCGCGGGCTACCCTACTCGGCGTGCTTTCTTTGAATTTATGCATCGGTTTAGCCTCCTCGCCCCGGAGATCGCAGATTCACACCACGATGAGAAGGTTGTTTGCCAAAAGATTCTAGAAAAAATGGGGCTTGCTGGATATCAGATTGGAAAAACAAAGGTATTCCTAAGGGCAGGTCAGATGGCTGAACTAGATGCTCGTAGGGCTCAAGTACTCAGCAATGCAGCAAAAACTATCCAACGGCGTGTACGAACCTATCAAGCTCGACAACATTATCTTTCATTGCGAACGAAGACCATATTCGTGCAGTCTGTGTGCAGAGCAAACCTTGCATGCAAACTTTATCAGAACATGAGGAGGAAAGCAGCTGCAATAAAAATTCAGAAGCATGCCCGCAGATATGAAGCTAGGAAATCATATAGGAAACTCCACGCATCAGTTCTTACCTTACAAACAGCTTTAAGGGCAGTGGCATCCCTTAAAGAGTTCAAGTTTAGAAAACAGACTAAAGCCTCAATCATTATTCAGGCTCGTTATAGGTGCCACAGAGCTTCTAAATATTACAAGAGGCTTAAGGTAGGAGCAATAGTCGCACAATGCAGATGGAGGGGGAAGATGGCCAGGAGAGAACTCAGGAAACTGAAGATGGCTGCAAGAGAAACTGGTGCACTTCAAGAAGCAAAGGACAAACTTGAAAAAAGGGTGGAGGAACTCACCTGGCGTCTCCAACTAGAAAAAAGTTTGCGGACCAACCTCGAAGAGTCTAAAGCACAAGAGATATCGAAACTGCAGAATTCATTACAGGAGATGCAGGGTAAACTTGATGAAACCAATGCTCTGCTTGTTAAGGAGCGAGAGAATGTAAAGAAGGTTACCATCGAAGCAACTCCGGTTATCCAAGAAAAGGAGGTTATTGTTGAAGACACTGCAAAGATTGACGCACTAACAGCGGAAGTTGAGAGGCTAAAGACTTCCCTTGAGACGGAGAAACAGAAAGCTGATGAATTTGAAAAGAAATATAATGAAATCCAAGCTTCGAGTGAAGAAAAGACTCACAAATTAGAAGACACAGAGAAGAAGGCTCGTCAGCTCCAAGAATCACTACACAGGCTGGAAGAGAAGATTCATAATTTAGAATCAGAGAATCAAGTTCTACGTCAACAAGCTCTGTCCATGTCTCCTAACAAGTTCCTCTCAGGCCGCTCCAGATCAATTATGCAGAGAGTTGAGAGTGGACATATTGCAGTGGAGTCTAAGCCATCTTTGGAGATGCATAGTCCATCAATGAACCACAGAGAATCCTCTGAAATGGAGGATAAGCCACAGAAGTCATTGAATGAGAAACAGCAAGAGAATCAAGAGTTGCTCATTAGATGCGTTGCACAACATTTAGGCTTTGCTGGAAATAGACCAATTGCAGCCTGTATCATATACAAATGCCTATTGCATTGGAGATCGTTTGAAGTTGAGCGTACCAGTGTTTTCGATCGCATAATCCAAACTATTGGGCATGCAATTGAGACACAGGAGAACAATGATGTCTTGGCTTATTGGTTATCCAATGCTTCTACGCTTCTCTTGTTACTCCAGCGCACCCTTAAAGCGAGTGGTGCAGCTGGAATGGCTCCTCAACGCCGTCGTTCTTCATCAGCAACTCTTTTTGGAAGGATGACACAAAGTTTCCGTGGAGCACCGGGGGGAGTGAACCTTTCTCTCATCAATGGTGGCATGAATGGTGGAGTGGATGCATTAAGACAAGTTGAAGCCAAGTACCCAGCTTTGCTTTTCAAACAGCAGCTTACAGCTTATGTGGAAAAGATATATGGAATGATCAGAGATAATTTGAAGAAAGAAATTTCTCCTTTGCTTGGATTGTGCATTCAGGCACCAAGAACATCCAGAGCAAGCTTGGTTAAGGGATCATCACGTTCAGTTGCAAACACCGAAGCTCAGAAAGCCTTGATTGCACATTGGCAAGGGATAGTTAAGAGCCTTGGAAACTTCTTAAATACTCTAAAAGCAAATCATGTTCCTCCATTCTTGGTTCGTAAGGTGTTCACCCAAATTTTTTCATTCATCAACGTCCAACTTTTCAACAGTCTTCTCTTAAGACGAGAGTGCTGCTCATTTAGCAACGGAGAATATGTGAAAGCTGGTTTGGCTGAATTGGAGCATTGGTGTTATAAAGCAACAGATGAGTATGCAGGCTCAGCTTGGGATGAACTCAAACATATAAGACAGGCTATAGGATTTCTGGTCATACATCAAAAACCAAAGAAAACGCTGGATGAAATAAGTCATGACCTATGTCCTGTACTTAGTATACAACAGTTATATCGAATAAGTACTATGTACTGGGATGACAAGTATGGCACACACAGTGTGTCCCCTGATGTCATATCCAATATGAGAGTGTTGATGACTGAAGATTCAAATAATGCCGTTAGTAATTCTTTCCTGTTGGATGATGATTCAAGCATTCCATTTTCTGTTGATGACATATCAAAGTCGATGGAACAGATAGATATATCTGATATAGAGCCCCCACCATTAATTCGTGAGAATTCTGGCTTTAGCTTCTTGTTGCCACGCGCAGACTGA 4422 0.4147 MEAPAGGVDDMTKLSYLHEPGVLQNLKSRYELNEIYTYTGNILIAINPFQRLPHIYDAHMMQQYKGAPFGELSPHVFAVADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRAATEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKNGRISGAAIRTYLLERSRVCQVNDPERNYHCFYLLCAAPQEEVEKYKLGHPKTFHYLNQSKCYELADISDAREYLATRRAMDIVGISQKDQEAIFRVVAAILHLGNIAFTKGKEADSSVPKDDKAKFHLKTTAELLMCDLAGLEDALVKRVMITPEEVIKRSLDPASAAISRDGLAKTIYSRLFDWLVDKINNSIGQDATSKCLIGVLDIYGFESFKTNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEINWSYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFSNKLYQTFKNHKRFIKPKLSRTDFTISHYAGEVQYQSDQFLDKNKDYVVPEYQDLLGASKCSFVAGLFPPLPEETSKSSKFSSIGSRFKLQLQSLMDTLNSTEPHYIRCVKPNNLLKPAIFENQNIMQQLRCGGVLEAIRISCAGYPTRRAFFEFMHRFSLLAPEIADSHHDEKVVCQKILEKMGLAGYQIGKTKVFLRAGQMAELDARRAQVLSNAAKTIQRRVRTYQARQHYLSLRTKTIFVQSVCRANLACKLYQNMRRKAAAIKIQKHARRYEARKSYRKLHASVLTLQTALRAVASLKEFKFRKQTKASIIIQARYRCHRASKYYKRLKVGAIVAQCRWRGKMARRELRKLKMAARETGALQEAKDKLEKRVEELTWRLQLEKSLRTNLEESKAQEISKLQNSLQEMQGKLDETNALLVKERENVKKVTIEATPVIQEKEVIVEDTAKIDALTAEVERLKTSLETEKQKADEFEKKYNEIQASSEEKTHKLEDTEKKARQLQESLHRLEEKIHNLESENQVLRQQALSMSPNKFLSGRSRSIMQRVESGHIAVESKPSLEMHSPSMNHRESSEMEDKPQKSLNEKQQENQELLIRCVAQHLGFAGNRPIAACIIYKCLLHWRSFEVERTSVFDRIIQTIGHAIETQENNDVLAYWLSNASTLLLLLQRTLKASGAAGMAPQRRRSSSATLFGRMTQSFRGAPGGVNLSLINGGMNGGVDALRQVEAKYPALLFKQQLTAYVEKIYGMIRDNLKKEISPLLGLCIQAPRTSRASLVKGSSRSVANTEAQKALIAHWQGIVKSLGNFLNTLKANHVPPFLVRKVFTQIFSFINVQLFNSLLLRRECCSFSNGEYVKAGLAELEHWCYKATDEYAGSAWDELKHIRQAIGFLVIHQKPKKTLDEISHDLCPVLSIQQLYRISTMYWDDKYGTHSVSPDVISNMRVLMTEDSNNAVSNSFLLDDDSSIPFSVDDISKSMEQIDISDIEPPPLIRENSGFSFLLPRAD* 1474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g0293 1473 Coils Coil 860 894 - -
Ahy6g0293 1473 CDD MYSc_Myo11 20 664 IPR036018 -
Ahy6g0293 1473 ProSiteProfiles IQ motif profile. 798 827 IPR000048 GO:0005515
Ahy6g0293 1473 MobiDBLite consensus disorder prediction 1036 1054 - -
Ahy6g0293 1473 Gene3D Kinesin motor domain 9 606 IPR036961 -
Ahy6g0293 1473 PRINTS Myosin heavy chain signature 36 55 IPR001609 GO:0003774|GO:0005524|GO:0016459
Ahy6g0293 1473 PRINTS Myosin heavy chain signature 426 454 IPR001609 GO:0003774|GO:0005524|GO:0016459
Ahy6g0293 1473 PRINTS Myosin heavy chain signature 93 118 IPR001609 GO:0003774|GO:0005524|GO:0016459
Ahy6g0293 1473 PRINTS Myosin heavy chain signature 373 401 IPR001609 GO:0003774|GO:0005524|GO:0016459
Ahy6g0293 1473 PRINTS Myosin heavy chain signature 140 167 IPR001609 GO:0003774|GO:0005524|GO:0016459
Ahy6g0293 1473 Gene3D Myosin VI head, motor domain, U50 subdomain 256 545 - -
Ahy6g0293 1473 SMART MYSc_2a 1 677 IPR001609 GO:0003774|GO:0005524|GO:0016459
Ahy6g0293 1473 MobiDBLite consensus disorder prediction 1022 1055 - -
Ahy6g0293 1473 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 729 827 IPR027417 -
Ahy6g0293 1473 ProSiteProfiles Myosin motor domain profile. 6 676 IPR001609 GO:0003774|GO:0005524|GO:0016459
Ahy6g0293 1473 CDD MyosinXI_CBD 1054 1439 IPR037975 GO:0007015
Ahy6g0293 1473 Pfam IQ calmodulin-binding motif 681 699 IPR000048 GO:0005515
Ahy6g0293 1473 Pfam IQ calmodulin-binding motif 802 819 IPR000048 GO:0005515
Ahy6g0293 1473 Pfam IQ calmodulin-binding motif 729 748 IPR000048 GO:0005515
Ahy6g0293 1473 Pfam IQ calmodulin-binding motif 776 796 IPR000048 GO:0005515
Ahy6g0293 1473 Coils Coil 821 855 - -
Ahy6g0293 1473 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 6 729 IPR027417 -
Ahy6g0293 1473 PANTHER MYOSIN 1 1470 - -
Ahy6g0293 1473 Pfam Myosin head (motor domain) 8 664 IPR001609 GO:0003774|GO:0005524|GO:0016459
Ahy6g0293 1473 Gene3D - 383 567 - -
Ahy6g0293 1473 ProSiteProfiles IQ motif profile. 727 756 IPR000048 GO:0005515
Ahy6g0293 1473 ProSiteProfiles IQ motif profile. 775 799 IPR000048 GO:0005515
Ahy6g0293 1473 Coils Coil 912 995 - -
Ahy6g0293 1473 PANTHER MYOSIN-9 1 1470 - -
Ahy6g0293 1473 Gene3D - 196 254 - -
Ahy6g0293 1473 ProSiteProfiles IQ motif profile. 679 706 IPR000048 GO:0005515
Ahy6g0293 1473 Pfam DIL domain 1292 1395 IPR002710 -
Ahy6g0293 1473 SMART iq_5 774 796 IPR000048 GO:0005515
Ahy6g0293 1473 SMART iq_5 749 771 IPR000048 GO:0005515
Ahy6g0293 1473 SMART iq_5 797 819 IPR000048 GO:0005515
Ahy6g0293 1473 SMART iq_5 678 700 IPR000048 GO:0005515
Ahy6g0293 1473 SMART iq_5 726 748 IPR000048 GO:0005515
Ahy6g0293 1473 SMART DIL_2 1291 1398 IPR002710 -
Ahy6g0293 1473 ProSiteProfiles Dilute domain profile. 1103 1416 IPR002710 -
Ahy6g0293 1473 Gene3D - 611 677 - -
Ahy6g0293 1473 Gene3D - 729 776 - -
Ahy6g0293 1473 Gene3D - 678 728 - -
Ahy6g0293 1473 Gene3D - 777 826 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g0293 Ahy-Chr6 3667261 3675715 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g0293 1 1473 Myosins gene family AT1G54560 83.243 0.0 2591
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g0293 K10357 - gmx:100816792 2597.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g1097 16 19833507 19842445 Ahy6g0293 6 3667261 3675715 hybridization
Ahy6g0293 6 3667261 3675715 Ahy2g0979 2 22628377 22645004 PCT