Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g0287 ATGGCTCCCAATCCAAGAGTTGTTCAGGCCTTTAATGCTATGAAGGCATTAGGAATTTCAGCTGAAGAGGTGAAGCCGGTGTTGGCAGAGTTGTTAAGAGTCTACGATAAAAATTGGGAACTTATTGAAGAGGACAATTATCGGACACTTGTAGATGCATACTTTGACTTCAAAGAAGATAAGGGAACAGATGCTAAGAAAAAAGTGTCTGTCAATTTTCATGCTCGAGAAAGACCAAAACAGAAGCTGCACTTGATAGATGATGATGATGATGATAACCAGGTTTTGTCAACAACAAATAAGTCGAGCCAAAAGTTATCCATTGCAGATAGGAAAACACCTCCAGGTAATTCTTCACAAGAAATCATTGAGCCATCTCAAGCTTCTAAGCAAGATAGCAAGCCCAGAACTAGTTCAGAAGCATCACATGCAAGGTTGATGAAGGTAGAAAGGGTTTCCAGTTCACCTTGCAACGCACCTAAATATAGAAAAACGTATTACGACATAGCACCATCTTCAGGGCACTCTGTTGATTATGAGAAAGAGCTAGTGAAACCCAGAACTAAGAAACCAAAGTTACAGACTCAGCCTATTTCAACAAATCATGACGGATTATTTGATGCTTCCTCATCATGCAATAATAATGCCACAACTAGCACGGGAAATATCACTATTGCTTCTTCACCCCGTGGAGAAGTTAAATTGTCTTTAAACTGCAACTCTGCCTTGGCTCAACCGGACTTCTGTAATCCTAATTTGGATACTGTGATGAAGTTCATGGAGGAGAAGTACCTTAGCTCTTGCATGACTCAGGATCCTCAGTTTTCAATGGTGAAGCTACTAAATGGTTTATGCAGGAGCTATCTGATGTTGGGACATAAAAAACGTTCGAATTTCAGGTCTTCTTCCAGCAACTTGGCAGTTACTCAAGATGAAAGGAGTTCCTCTCAGTTTATCAATGACATAACAAGAGGTTCAGAAGAGGTGAAAATCCCATTAATAGATGAAAATGGCAGTGAGGACTTGCCAAAATTTAATTATATACCGCAAAATATAATATACCAAAGTGCTAATGTAAATATTTCATTGGCTCGAATTTCGGATGAGGGTTGCTGTTCTGATTGTTCAGGCAACTGTCTTTCTGCTTCACTGCCTTGTGCATGTGCCCGTGAAACTGGTGGAGAGTTTGCTTACACTCCTGAAGGTGTGTTGAACGAAGAGTTTCTTAAAGCTTGCATTTCCATGAAGAATGAACCTCAAGATCGTCATTTCGTGTATTGTCAAGAGTGCCCATTGGAGAAGTCTAAGAATGAGTTCATGCCCGAACAATGCAAAGGGCATATGGTTAGGAAGTTTATCAAAGAATGCTGGAGGAAATGTGGCTGTGACATGCGATGTGGAAATCGAGTAGTACAAAGAGGTATAAGATGCAAATTGCAGGTGTACATGACTCGTGAGGGAAAGGGCTGGGGCCTTAGAACACTTGAGGATTTGCCGAAGGGTACTTTTGTATGTGAATACGTTGGGGAAATATTAACCAATACAGAGTTATACGAAAGGAATGTGCACAGCAGTTGCAGCAATGACAGACACACATATCCCGTAACTCTTGATGCAGACTGGGGATCAGAAGGGGTCTTGAAAGATGAGGAAGCGCTTTGTTTAGATGCAACATATAATGGAAATGTTGGAAGGTTTATCAATCACAGATGCTTTGATGCAAATCTCATTGACATTCCTGTTGAAGTGGAGACTCCTGATCACCACTATTACCATCTTGCTTTCTTTACCACCCGAGATGTGAGAGCCAATGAGGAGTTGACGTGGGATTATGGTATTGACTTTGATGATCATGACCATCCTATTAAAGCATTTCAATGTTCTTGTGGAAGCGCTTTCTGCGGTGATAAGAAGAGAAAAGGGAAAGGGAAAGTAGAAAATCAGGTCCATGTATCTGCAAGAACAAGTGTGTCTGAATTTGGAAGCAGCCGAAGCAATACCTGCAGCTAG 2010 0.4104 MAPNPRVVQAFNAMKALGISAEEVKPVLAELLRVYDKNWELIEEDNYRTLVDAYFDFKEDKGTDAKKKVSVNFHARERPKQKLHLIDDDDDDNQVLSTTNKSSQKLSIADRKTPPGNSSQEIIEPSQASKQDSKPRTSSEASHARLMKVERVSSSPCNAPKYRKTYYDIAPSSGHSVDYEKELVKPRTKKPKLQTQPISTNHDGLFDASSSCNNNATTSTGNITIASSPRGEVKLSLNCNSALAQPDFCNPNLDTVMKFMEEKYLSSCMTQDPQFSMVKLLNGLCRSYLMLGHKKRSNFRSSSSNLAVTQDERSSSQFINDITRGSEEVKIPLIDENGSEDLPKFNYIPQNIIYQSANVNISLARISDEGCCSDCSGNCLSASLPCACARETGGEFAYTPEGVLNEEFLKACISMKNEPQDRHFVYCQECPLEKSKNEFMPEQCKGHMVRKFIKECWRKCGCDMRCGNRVVQRGIRCKLQVYMTREGKGWGLRTLEDLPKGTFVCEYVGEILTNTELYERNVHSSCSNDRHTYPVTLDADWGSEGVLKDEEALCLDATYNGNVGRFINHRCFDANLIDIPVEVETPDHHYYHLAFFTTRDVRANEELTWDYGIDFDDHDHPIKAFQCSCGSAFCGDKKRKGKGKVENQVHVSARTSVSEFGSSRSNTCS* 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g0287 669 ProSiteProfiles SET domain profile. 477 612 IPR001214 GO:0005515
Ahy6g0287 669 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 1 669 IPR025776 -
Ahy6g0287 669 SMART set_7 477 618 IPR001214 GO:0005515
Ahy6g0287 669 Gene3D SET domain 322 637 IPR046341 -
Ahy6g0287 669 MobiDBLite consensus disorder prediction 96 135 - -
Ahy6g0287 669 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SUVR2-LIKE PROTEIN 1 651 - -
Ahy6g0287 669 MobiDBLite consensus disorder prediction 185 205 - -
Ahy6g0287 669 Pfam SET domain 489 612 IPR001214 GO:0005515
Ahy6g0287 669 Gene3D - 1 60 IPR043017 -
Ahy6g0287 669 CDD SET_SETDB-like 343 612 - -
Ahy6g0287 669 ProSiteProfiles Pre-SET domain profile. 375 474 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Ahy6g0287 669 SUPERFAMILY SET domain 329 634 IPR046341 -
Ahy6g0287 669 SMART preset_2 319 461 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Ahy6g0287 669 MobiDBLite consensus disorder prediction 88 152 - -
Ahy6g0287 669 PANTHER INACTIVE HISTONE-LYSINE N-METHYLTRANSFERASE SUVR1-RELATED 1 651 - -
Ahy6g0287 669 Pfam Ubiquitin-binding WIYLD domain 6 59 IPR018848 GO:0018024
Ahy6g0287 669 Pfam Pre-SET motif 322 469 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g0287 Ahy-Chr6 3572791 3580999 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g0287 453 612 C2H2 Transcription Factor Family AT2G23740 43.478 2.59e-31 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Ahy6g0287 Pre-SET 1.20E-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g0287 - - gsj:114402909 847.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g1105 16 20023808 20034285 Ahy6g0287 6 3572791 3580999 hybridization
Ahy6g0287 6 3572791 3580999 Ahy12g1007 12 22720928 22730597 PCT
Ahy6g0287 6 3572791 3580999 Ahy9g1322 9 45815611 45827071 PCT