Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g0281 ATGTCAAATAACAGCACAAGTGGTGGTAAGAAGAGAAAACTCTGTCCACCAAAAGAACCTGAAGATTGGTGCTTTGAATGCAAGGATGGTGGAAAAGTCATTGTATGCGATCGCAGGAACTGTGTGAAGGTTTATCACACCGACTGTGTTCCTGTTACTCCTAGGAAGGACAAATCTTGGATTTGTGCTTGGCATTATTGCTATGAATGCAAGGAGTCCGCAAAGTTTTATTGCCTTGGTTGTCCAAATGCTTTGTGCAAAGAGTGCTTGCCTTCCTCAGAATTTATCACTGTCAAGGGTGATAAAGGATTATGCTGCGACTGCGCGCCGCTAGTCAAAATTATAGAACAAAATTTGGAGCGGGACTCTCAGGGGAACAAGATAAGAGTGGATGGAAGAGATACATATGAGGGTCTATTCAAGGAATACTGGGAAATTATTAAGCTAAACGAAGGATTAACTAGTGATGATATCTCTGCTGCAGAAACCAACTACAACAAAAAGGTTAAAAAATCTCCAGATCAAAGCAAAGTCACTGATGTAGATAAAGAAAGTCAGAATGACTCCATGTCATCGGACGGCGATGAAGTTTTTACATATAAACACAACTCAACCAAAAGGAAGCAGTCCAGTTCACTGGAGTTTATGGGATGGGGATCGAAACCTCTCCTTAGCTTCCTTGCGTCCATTGGAAAATTTAGTACTGAACCATTGTCACAGTGGGGTATACGGACTCTCGTGTGTGAATACATTGAGAAGAACAATCTCTATCTCTCGCAAGATAAGAGGAAGTTCCTCCTTGATGAAATGCTGTTTTCTATATTCAGAAAAAAGGTTATGTTGAAAAATCAAATATATCCTCTATTGGAATTTCACTTTGCTGAAAAGTCGGGTGATACAGATGGTGAAGAAGACAATTATGAAAGCATAAGCACTCCTCCAGACAACAAGGGTCTCAGTGATCAGACTTCATGTAGGGAAAGGAGTTTGTCAAGCTCGAAAGGGAAACTTCTATTGGAAAAGAAGGATTTGTCTATCAAGCCTAGTCGTTTTGCATCCATAAGTTCCAGTAATATAAGACTTATTTACTTAAGACAAAGCTTGGTGCTAGAGTTATGTAAACAACTTGAAAGTGCTATGGAAAAGGTTGTTGGAGCCTTCGTTAGAGTTAAAATGGATTCCAGTGATTGTAAGCAGACAAGGCCTTACCATCTTGTGAGAGTTAAAGGTGTTGTATTGGAGGATGATGCTTATAGGAGAATGCTTTTGGTAGTTTCCTTCATGTCTGAAGCCATCCCTATCTCCGAGCTTTCTGATAATGACTTCACAGAGCAAGAATGTGAGGATTTGCGGCTAAAAGTGAAAGCCAAAATGCTGCAGAAACTAACTGTTGTGGAGCTTCAAGAAAGGGCAAACATTCTTCATGAGGATATAACAAAGCATTGGATCGCGACTCGACTAACCTATTTGCAAAATCAAATTGACCGTGCAAACCTGAAGGGAAGACAAAGAGAAAAATTTGCCTTACTAGATGAAAGGGAAAAACTTCAACAACCATGGAAGCAAGAAGAGTTGTTAAAGCGAGTTCCATCAGTTGTCCCAGAGTTTCCTACAAAGCCACACAAATGA 1629 0.4021 MSNNSTSGGKKRKLCPPKEPEDWCFECKDGGKVIVCDRRNCVKVYHTDCVPVTPRKDKSWICAWHYCYECKESAKFYCLGCPNALCKECLPSSEFITVKGDKGLCCDCAPLVKIIEQNLERDSQGNKIRVDGRDTYEGLFKEYWEIIKLNEGLTSDDISAAETNYNKKVKKSPDQSKVTDVDKESQNDSMSSDGDEVFTYKHNSTKRKQSSSLEFMGWGSKPLLSFLASIGKFSTEPLSQWGIRTLVCEYIEKNNLYLSQDKRKFLLDEMLFSIFRKKVMLKNQIYPLLEFHFAEKSGDTDGEEDNYESISTPPDNKGLSDQTSCRERSLSSSKGKLLLEKKDLSIKPSRFASISSSNIRLIYLRQSLVLELCKQLESAMEKVVGAFVRVKMDSSDCKQTRPYHLVRVKGVVLEDDAYRRMLLVVSFMSEAIPISELSDNDFTEQECEDLRLKVKAKMLQKLTVVELQERANILHEDITKHWIATRLTYLQNQIDRANLKGRQREKFALLDEREKLQQPWKQEELLKRVPSVVPEFPTKPHK* 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g0281 542 Pfam Plus-3 domain 358 453 IPR004343 GO:0003677
Ahy6g0281 542 Gene3D - 354 476 IPR036128 GO:0003677
Ahy6g0281 542 SUPERFAMILY Plus3-like 355 477 IPR036128 GO:0003677
Ahy6g0281 542 MobiDBLite consensus disorder prediction 300 325 - -
Ahy6g0281 542 MobiDBLite consensus disorder prediction 309 325 - -
Ahy6g0281 542 SMART rtf1 353 456 IPR004343 GO:0003677
Ahy6g0281 542 Gene3D SWIB/MDM2 domain 204 302 IPR036885 -
Ahy6g0281 542 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 9 112 IPR013083 -
Ahy6g0281 542 PANTHER ZINC ION BINDING / DNA BINDING PROTEIN 12 535 - -
Ahy6g0281 542 SUPERFAMILY FYVE/PHD zinc finger 19 71 IPR011011 -
Ahy6g0281 542 ProSiteProfiles Plus3 domain profile. 353 479 IPR004343 GO:0003677
Ahy6g0281 542 PANTHER OS01G0884500 PROTEIN 12 535 IPR045894 -
Ahy6g0281 542 Pfam SWIB/MDM2 domain 223 292 IPR003121 -
Ahy6g0281 542 MobiDBLite consensus disorder prediction 166 190 - -
Ahy6g0281 542 MobiDBLite consensus disorder prediction 166 195 - -
Ahy6g0281 542 SMART PHD_3 23 66 IPR001965 -
Ahy6g0281 542 ProSiteProfiles SWIB/MDM2 domain profile. 212 295 IPR003121 -
Ahy6g0281 542 SUPERFAMILY SWIB/MDM2 domain 206 295 IPR036885 -
Ahy6g0281 542 CDD PHD5_NSD 23 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g0281 Ahy-Chr6 3499739 3504065 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SWI/SNF-BAF60b Ahy6g0281 Plus-3 1.30E-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g0281 - - adu:107492011 905.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g1116 16 20235680 20239988 Ahy6g0281 6 3499739 3504065 hybridization