Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g0272 ATGTGTGAAGCCTTGCAGAGACAATACCAATTGCTGGAGGAGATTGGTCGTGGTAGATTCGGCACTGTGTTTCGCTGCTTCGACCCTAATTCCGGTGAGTTTCTCGCATGCAAGGTTATCGATAAGGGTCTTCTTCTTGACCCCACCGATCGTGCCTGCATCGAAAACGAATCCAAGTTCATGACTTTTCTTTCTCCACACCCTAACATTGTTAAGATTTTCGGAGCCTATGAGGATTCCGATTCTCTCTCCATCGTCGCTGAGCTTTGCGAGCAAGAAACCCTATTCGACCGAATTGCTGATCGACCTTTGCCGGAGATAGAGGCCGCCGCCGTAATGAAACAGCTTCTTGAGGCGGTGGCGCATTGCCACAGGCTGGGGATAGCGCACAGGGACATAAAGCCAGATAATTTGCTTTTCGATAGAAGGGGGAATCTGAAAGTTGCGGACTTTGGTTCGGCGGAGTGGTTCGGCGACGGAAGAGGGATGAGTGGGGTGGTGGGGACGCCGTATTACGTGGCGCCGGAGGTGGTGATGGGAAGGGAATACAGTGAGAAAGTTGATGTTTGGAGCTCCGGTGTGATTCTTTACATAATGTTGGGTGCTATTCCACCATTCTATGGAGAGAATGCTTCTGAGATTTTTGAAGCTGTTGTTAGGGCTAATCTTAGATTCCCAACTACCATCTTTAGGTCTGTTTCTTCTTCTGCTAAGGATCTTCTCAGAAAGATGATTTGCAAGGACCCTTCAAGGAGAATTTCAGCAGAGCAAGCATTAAGGCATCCATGGATCTTAAGTGGAGGAGGTGTGACTAGTGATCTGAACTGA 828 0.4855 MCEALQRQYQLLEEIGRGRFGTVFRCFDPNSGEFLACKVIDKGLLLDPTDRACIENESKFMTFLSPHPNIVKIFGAYEDSDSLSIVAELCEQETLFDRIADRPLPEIEAAAVMKQLLEAVAHCHRLGIAHRDIKPDNLLFDRRGNLKVADFGSAEWFGDGRGMSGVVGTPYYVAPEVVMGREYSEKVDVWSSGVILYIMLGAIPPFYGENASEIFEAVVRANLRFPTTIFRSVSSSAKDLLRKMICKDPSRRISAEQALRHPWILSGGGVTSDLN* 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g0272 275 Pfam Protein kinase domain 9 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy6g0272 275 CDD STKc_CAMK 8 263 - -
Ahy6g0272 275 SMART serkin_6 9 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy6g0272 275 ProSitePatterns Serine/Threonine protein kinases active-site signature. 128 140 IPR008271 GO:0004672|GO:0006468
Ahy6g0272 275 PANTHER SERINE/THREONINE-PROTEIN KINASE 3 271 - -
Ahy6g0272 275 ProSiteProfiles Protein kinase domain profile. 9 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy6g0272 275 SUPERFAMILY Protein kinase-like (PK-like) 7 266 IPR011009 -
Ahy6g0272 275 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Ahy6g0272 275 PIRSF ILK 2 260 - -
Ahy6g0272 275 Gene3D Transferase(Phosphotransferase) domain 1 2 273 - -
Ahy6g0272 275 PANTHER PHOSPHOENOLPYRUVATE CARBOXYLASE KINASE 2 3 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g0272 Ahy-Chr6 3377112 3378474 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g0272 3 267 EF-hand Containing Proteins AT4G04720 43.494 4.62e-75 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Ahy6g0272 Pkinase 1.30E-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g0272 - K08794 gmx:548089 419.468
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g1129 16 20437463 20438812 Ahy6g0272 6 3377112 3378474 hybridization