Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Ahy6g0270 | ATGGATCATTATTATTATTATTCATCATTCTCTGTTCCACCACCATATGCAACTACATCAAACTTTAATCAATCCCTTCCCTTCAACGAAAATGACTCCGAGGAAATGCTTCTATGCGAGGTTCTTGCACAGGGAAGTGGCGGTGATGCAGCGGAAAACTCCTCCATCGAAGAGGTGAACTCAACCATGGCGGCGCTGCAGCCACAACAAGCATCTTACAGAGGGGTAAGAAGGAGGCCATGGGGAAAGTACGCGGCAGAGATAAGGGACTCTACGAGGAACGGCGAGAGGGTATGGTTGGGAACCTTTGATACGGCGGAGGAAGCTGCTTTGGCTTACGACCAAGCGGCATTGGCAAGTAGAGGATCAGTGGCGATTTTGAACTTCCCGGCAGGGATGGTTGTTGAGTCGCTAGAGAAGATGATGATGGAGTGTGGTGGGTTTAGTGAAGGTTGTTCTCCGGTGTTGGAGCTGAAGAAGAAGCATTCCATGAAGAGGAAGATGGAGAACAGGGAGAAGAAACTGCTCATGATGATGAATACAAATAATAACAACAATCATCATAATCATAATCATGTCATGGTATTCCAGGATTTGGGTGCTGACTATTTGGAACAACTTCTTACGCTCTCGTCCAAGGAGGCAATGCTATAG | 654 | 0.4679 | MDHYYYYSSFSVPPPYATTSNFNQSLPFNENDSEEMLLCEVLAQGSGGDAAENSSIEEVNSTMAALQPQQASYRGVRRRPWGKYAAEIRDSTRNGERVWLGTFDTAEEAALAYDQAALASRGSVAILNFPAGMVVESLEKMMMECGGFSEGCSPVLELKKKHSMKRKMENREKKLLMMMNTNNNNNHHNHNHVMVFQDLGADYLEQLLTLSSKEAML* | 218 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Ahy6g0270 | 217 | PRINTS | Ethylene responsive element binding protein signature | 73 | 84 | IPR001471 | GO:0003700|GO:0006355 | |
Ahy6g0270 | 217 | PRINTS | Ethylene responsive element binding protein signature | 96 | 112 | IPR001471 | GO:0003700|GO:0006355 | |
Ahy6g0270 | 217 | PANTHER | DNA-BINDING DOMAIN | 20 | 210 | IPR044808 | GO:0003700|GO:0009873 | |
Ahy6g0270 | 217 | Pfam | AP2 domain | 73 | 122 | IPR001471 | GO:0003700|GO:0006355 | |
Ahy6g0270 | 217 | SMART | rav1_2 | 72 | 136 | IPR001471 | GO:0003700|GO:0006355 | |
Ahy6g0270 | 217 | SUPERFAMILY | DNA-binding domain | 73 | 131 | IPR016177 | GO:0003677 | |
Ahy6g0270 | 217 | Gene3D | AP2/ERF domain | 72 | 131 | IPR036955 | GO:0003700|GO:0006355 | |
Ahy6g0270 | 217 | ProSiteProfiles | AP2/ERF domain profile. | 72 | 130 | IPR001471 | GO:0003700|GO:0006355 | |
Ahy6g0270 | 217 | PANTHER | ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1B | 20 | 210 | - | - | |
Ahy6g0270 | 217 | CDD | AP2 | 73 | 131 | IPR001471 | GO:0003700|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Ahy6g0270 | Ahy-Chr6 | 3355096 | 3356039 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Ahy6g0270 | 26 | 208 | AP2-EREBP Transcription Factor Family | AT3G23240 | 51.913 | 1.04e-59 | 185 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2 or ERF-ERF | Ahy6g0270 | AP2 | 3.70E-15 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Ahy6g0270 | K14516 | - | fve:101312740 | 197.978 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Ahy16g1132 | 16 | 20493050 | 20493897 | Ahy6g0270 | 6 | 3355096 | 3356039 | hybridization | |
Ahy6g0270 | 6 | 3355096 | 3356039 | Ahy12g0908 | 12 | 18138829 | 18146752 | PCT | |
Ahy6g0270 | 6 | 3355096 | 3356039 | Ahy2g0765 | 2 | 13757297 | 13758244 | PCT |