Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g0241 ATGTGTTGCCGCAATGCCCTCACAGCTTTGTCGGAGGCACTGGCCTTGCATAATCACAGCCTACATGGACCACTCTTCGTTTCCCCGCGTCAATGGCAGAACTGCAGCACCTTATTCTACTCCCAATATAAGATGCCAGCACACTCGTGTGGCTTTGACGCGTTGTTCATGGACAAGGAAATCTACCATTGCTCCAACTTGGCTATGCAAGATGTTGCATCCATGCCGCAGTACCAAGATACCTTGAACCAATGCTCACACTTCGATCAACCGTTTGTTGAGGCATGTCCGGATTGTACCACTGCAATATTGAGCCTGAGAGACGCTTTGAACGGAGGCAACGGAGATGGCGCAGACAGAGCCGTATGCGGGGTGGCAGCTCTTGTTGCTGTTATGGGTGGCAAACAAAATGACCCATCTCTCGCTGACAAATTCTTACGCTGCTTGCCACCGATTTCGGTCAAAAAATCAAAATATTCGGCAAGTCTAGTGTTAATAAGCGTGCCAGTAGTGGTGGTAGTATTGTTGTTGATAGCTCTACTGGTAAAGTATACACACAAGAAGAAGAAGCAGCCATTGAGGCCATTTCAATTGAAGGAGATAACATCATGGGCAGGACTATACTGCTTCACGAAACAAGAAATCGAAAAGGCAATGAATTACGGGGATGAGAAGATATGCCTAGGACGCGGAAGTGCCGGGCAGGTTTACAGAGGCGTTCTCCCCAGCGGTCAGCTTGTTGCCATCAAGCATTTGACCAAGAGCAGCCCTTCTGATTCATTCACTCGGGAGATTCAAGGCCTTTCTAGACTTCGCCATCCCAACCTTGTTTGTCTTTTTGGTTGTTGCATTGAAGGTGACGAGAAATATTTAGTTTATGAATTTTGTGCTAACGGAAATCTAGCTCAACATCTACTAAAAAAAGACTGCCATTTGAATTGGGAAACAAGAGTGAAAATTTTGAGGGATTGTTCATATGCACTAAAGTATCTCCACCATCATATAGAAGGCTGCGTTGTCCATAGAGATATAAAGCTGACAAACATACTTCTGACGGAGGAATACCAAGCGAAACTGTCGGATTTCGGATTGGCAAGGATGATGGGGGTAGAAGAGAGCAAGGTATTCACAGACATTAGAGGGACAATAGGGTACATGGATCCTGAGTACATGAGCAATGCGAAGCTAACCTGTGCAAGTGACGTGTACAGTTTTGGGATTGTGGCTTTACAAATCCTTTCAGGACAGAAAGTGATAGAGATGGATCTTGATGCAAGAGACCAGCTGACCAGAAAGGCTCGAGATGTAAGTATGGGAAAGCGTCCGCTGAGGGATTTTGAGGACCCGAGGCTAGGAGGCGAGGTTAACAAGGCGAACTTCGAATCTATATTGCACATAGCGGTTCTGTGTGTTGCAAAACACGGCAAGAGTCGTCCAACCATTGAAGTTATCTTTGACGAGCTCGACGCCGTCTATAAGGACACCTGTTTACGCATCTCCGCCGCAAAGCAAGACAATAATAAGCGCCCGCCATCTTCGTCAACTCCATCCACCAGCTCAAGCTCCAAGTCCCCCAAACAGATCTCTGTTTGA 1593 0.4664 MCCRNALTALSEALALHNHSLHGPLFVSPRQWQNCSTLFYSQYKMPAHSCGFDALFMDKEIYHCSNLAMQDVASMPQYQDTLNQCSHFDQPFVEACPDCTTAILSLRDALNGGNGDGADRAVCGVAALVAVMGGKQNDPSLADKFLRCLPPISVKKSKYSASLVLISVPVVVVVLLLIALLVKYTHKKKKQPLRPFQLKEITSWAGLYCFTKQEIEKAMNYGDEKICLGRGSAGQVYRGVLPSGQLVAIKHLTKSSPSDSFTREIQGLSRLRHPNLVCLFGCCIEGDEKYLVYEFCANGNLAQHLLKKDCHLNWETRVKILRDCSYALKYLHHHIEGCVVHRDIKLTNILLTEEYQAKLSDFGLARMMGVEESKVFTDIRGTIGYMDPEYMSNAKLTCASDVYSFGIVALQILSGQKVIEMDLDARDQLTRKARDVSMGKRPLRDFEDPRLGGEVNKANFESILHIAVLCVAKHGKSRPTIEVIFDELDAVYKDTCLRISAAKQDNNKRPPSSSTPSTSSSSKSPKQISV* 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g0241 530 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 40 2 499 - -
Ahy6g0241 530 Gene3D Phosphorylase Kinase; domain 1 182 295 - -
Ahy6g0241 530 Pfam SPARK 2 115 IPR043891 -
Ahy6g0241 530 MobiDBLite consensus disorder prediction 502 530 - -
Ahy6g0241 530 SMART serkin_6 222 491 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy6g0241 530 Pfam Protein kinase domain 228 484 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy6g0241 530 ProSiteProfiles Protein kinase domain profile. 222 492 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy6g0241 530 PANTHER OS01G0253100 PROTEIN 2 499 IPR045271 GO:0004714|GO:0006468
Ahy6g0241 530 ProSitePatterns Serine/Threonine protein kinases active-site signature. 339 351 IPR008271 GO:0004672|GO:0006468
Ahy6g0241 530 Gene3D Transferase(Phosphotransferase) domain 1 296 512 - -
Ahy6g0241 530 SUPERFAMILY Protein kinase-like (PK-like) 203 487 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g0241 Ahy-Chr6 2955797 2959608 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g0241 155 488 Receptor kinase-like Gene Family AT2G19230 35.882 2.59e-57 203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-2 Ahy6g0241 Pkinase 3.70E-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g0241 - - gmx:100807158 675.241
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g1174 16 21387698 21390655 Ahy6g0241 6 2955797 2959608 hybridization
Ahy6g0241 6 2955797 2959608 Ahy12g0169 12 2928004 2931256 PCT
Ahy6g0241 6 2955797 2959608 Ahy2g0200 2 2333646 2336863 PCT