Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g0171 ATGGATACATTATCAAGCACAGTTTCAACCCTCAAGATTCCATCAGTACCCACACAAACTCATCGTCATCGTGAATTATTCTATCATCACTTGATAAGAACCAACACTCCCAACTGTCAACCCTGTGTTTCTTCTTCCACTGCTTCCATTATTCCCAGAACCAGCAAGAAGGCTGCTGCCTCTACTTTTCTACCAGTCTCTGCTTCCTCATCGTCACCGCCTCTCCAACCATGTTCTTCTTCTCCAATCTTCCATGCAAAGCCAGCCACTGGGTACGCAGCGGCCATAATAGAGGTGGCTCAAAGCACCAAGTCCCTTCACGCCGTTCACATGGATGTTCAGAGGCTCCTGAGGTTTCTCCAATCAAGCAATAATAACGATAAGGAAGAAGCAGCGGCTACCATGATGATGATGAAGGAGGTGGGCAAGCAAGGAAAGTTTCAGAGGCACGTGGTTGCGTTGTTGAGGATGCTGATGAAGAAGGGCAAATTGGGAATTTTGGGAGAAGTTTTAAAAGAGTTCGAGAGGATCTACGAGGAGCTTTGTGGAACTCAAGTGGTGTTGGTGTCATCTGAAGAGTTGTTAGGGATAGCCAAGAAGGTGCGGCAAACACCCTCTTTTGTCTTCTGA 630 0.4683 MDTLSSTVSTLKIPSVPTQTHRHRELFYHHLIRTNTPNCQPCVSSSTASIIPRTSKKAAASTFLPVSASSSSPPLQPCSSSPIFHAKPATGYAAAIIEVAQSTKSLHAVHMDVQRLLRFLQSSNNNDKEEAAATMMMMKEVGKQGKFQRHVVALLRMLMKKGKLGILGEVLKEFERIYEELCGTQVVLVSSEELLGIAKKVRQTPSFVF* 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g0171 209 SUPERFAMILY N-terminal domain of the delta subunit of the F1F0-ATP synthase 89 181 IPR026015 -
Ahy6g0171 209 Pfam ATP synthase delta (OSCP) subunit 90 193 IPR000711 GO:0015986|GO:0046933
Ahy6g0171 209 PANTHER ATP SYNTHASE DELTA CHAIN 1 203 IPR000711 GO:0015986|GO:0046933
Ahy6g0171 209 PANTHER ATPASE, F1 COMPLEX, OSCP/DELTA SUBUNIT PROTEIN 1 203 - -
Ahy6g0171 209 Gene3D - 86 181 IPR026015 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g0171 Ahy-Chr6 2107886 2108759 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g0171 86 203 Primary Pumps ATPases AT4G09650 25.564 8.66e-07 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g0171 - K02113 adu:107491920 368.237
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g1254 16 23266185 23267185 Ahy6g0171 6 2107886 2108759 hybridization