Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g0144 ATGCAAATGCAGGAGGAGCAGATCATGAAGCTGAAGGACGAGAATGCGCCACCGGGGGACGTGGTGGTTAGGTGGGAGAAGTTTCTCCCTCGGATGGCGCTCAGAGTGTTGCTTGTTGAAGCCGATGATTCTACACGCCAGATCATATCCGCCCTTCTCCGAAAATGCAGTTACAAAGTTGCTGCAGTTCCTGATGGCCTAAAGGCATGGGAGACATTGAAGAGCAAAGCACCTGAGATTGATCTTATATTAACAGAAGTGGAGTTGCCGTCAATATCTGGATTTTCACTTCTCACGTTGATAATGGAGCATGACATTTGCAAAACCATTCCCGTCATAATGATGTCTACTAATGATTCAATTAGCATGGTATTCAAATGCATGCTGAAAGGTGCGGCTGATTTTCTTATAAAACCCATTCGAAGGAATGAGCTACGGAACTTATGGCAGCACGTATGGAGAAGGCATGCTATTAGCGGGTCCCATCAGAGTTTAACACTGCCGCAGAATAAATTTGAAGTTGCTGCAGAAAACAATGCTACGAGCAATAATTCTAGTGGTTCTGTGGCTTCCCCACAGAAAAATAGAGAGTACAGTGGTGAGAAAGCAAGTGATGCTCAAGTTACGTCCCCGTTGAAAAGTTCCTCAAAGTTGATCAATATTGACACAGTGAAGCATGAAGAGGCTACCAAATTTGAAAGGGAATCAGCTACGCACTATAGTGAATCCGAGAAATCAAATATGTTTGTATCCGATGCTACAAGGTGCTACAAAACTCTTAATGCGACAGGTGCAAGGCTAGATCAAGGCTTTGATTGTGATGAAACAGAAAATGAAGATGAAGTTTTAAGAACAGAATTAAGCAAAGCCCATCCTCATATTAATACCGAGATTAACAAATGCAATGATGCACTGGTAGAACCTTCTACAGGGGCAATTGACTTGATTGCTACATTTGAGAATTCTCCAAAGAGCACGGGTGAAAATTGTAGTTTCAATGCTGACAACACATTCAAGTCAGTTTTTGATACACAATTGGGACTTTCTTTAAGAAGAGATTCTCCTAGTAGCTCATGTAAGCCTGCACTGGAAGAAAGGAAAATATTGAACCATTCAACTGCATCGGCCTTTTCTTGGTATAGCAGCAGTAAGTTGTTGCAGCCCCTTTTCCCATCTCAATCAATTACTTCTGCTAAACTATCAAGTGTCAGTTGTAATTCTCATGAATCCCATAAGTCATCTGAAAATACACATACTCATCATCAGCATGGTGATAAAATTCAAGATAAACAGAACATGACCACTTTGGTCACTCAGACTGGCCAAATTGAACCAAAATCACCAAACAATGAACTTGTATTCTCTTGTGCTACTGGTGTTTCTTCTGATCATAACTCTATGGGGAATGCCAATGCGTTCCCTCATATGCCCTGTGCACAATCAGCTGTGCATCCCATATGGACTCCGAAACCAGTGTCCAAGAAAGAAAATTCTTCATTTCCCACTAGTGCTTCTTCTCATTCCAACCCTGAAACTGACAATTCAGAATGTCATCGATGCTCGGATGATGCCACCTACACTTCTGATCAAAATGGAAATGATCAAAGCAAGATGGATTGTGTTAGGCATGACTCTGCTGCTGCTGCTGGTCAGAGTGCAAGTACTAGTTTTTACCTTGAAAATCATAATAGCAGCGGTGCATATGGAAGCATAGGCAGCGGAAGTGATGCAAATGCTACTTCAGCTGTGGTAACTAAGAACAACCCCGAAAGTTTTGCTGATAGTAGTCAACATAGTCATGATGGATTCAGAGGGACAGATTCTCATCGGAGCAGCCAAAGAGAAGCAGCTCTAACAAAGTTTCGGCTGAAGAGGAAGGAGAGATGCTACGAGAAGAAGGTTCGATATCAGAGCCGGAAAAGACTGGCAGAGCAGCGCCCTAGGGTGAAAGGGCAGTTCGTTCGCCAGGTGCAAAATGATCATCCAGTAGCAGGTGTAGGTGGCTCCTGA 2010 0.4299 MQMQEEQIMKLKDENAPPGDVVVRWEKFLPRMALRVLLVEADDSTRQIISALLRKCSYKVAAVPDGLKAWETLKSKAPEIDLILTEVELPSISGFSLLTLIMEHDICKTIPVIMMSTNDSISMVFKCMLKGAADFLIKPIRRNELRNLWQHVWRRHAISGSHQSLTLPQNKFEVAAENNATSNNSSGSVASPQKNREYSGEKASDAQVTSPLKSSSKLINIDTVKHEEATKFERESATHYSESEKSNMFVSDATRCYKTLNATGARLDQGFDCDETENEDEVLRTELSKAHPHINTEINKCNDALVEPSTGAIDLIATFENSPKSTGENCSFNADNTFKSVFDTQLGLSLRRDSPSSSCKPALEERKILNHSTASAFSWYSSSKLLQPLFPSQSITSAKLSSVSCNSHESHKSSENTHTHHQHGDKIQDKQNMTTLVTQTGQIEPKSPNNELVFSCATGVSSDHNSMGNANAFPHMPCAQSAVHPIWTPKPVSKKENSSFPTSASSHSNPETDNSECHRCSDDATYTSDQNGNDQSKMDCVRHDSAAAAGQSASTSFYLENHNSSGAYGSIGSGSDANATSAVVTKNNPESFADSSQHSHDGFRGTDSHRSSQREAALTKFRLKRKERCYEKKVRYQSRKRLAEQRPRVKGQFVRQVQNDHPVAGVGGS* 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g0144 669 PANTHER PRR RESPONSE REGULATOR 211 653 - -
Ahy6g0144 669 CDD psREC_PRR 36 139 - -
Ahy6g0144 669 MobiDBLite consensus disorder prediction 489 517 - -
Ahy6g0144 669 MobiDBLite consensus disorder prediction 411 428 - -
Ahy6g0144 669 PANTHER PRR RESPONSE REGULATOR 26 213 - -
Ahy6g0144 669 PANTHER TWO-COMPONENT RESPONSE REGULATOR 26 213 IPR045279 GO:0009736
Ahy6g0144 669 ProSiteProfiles Response regulatory domain profile. 35 153 IPR001789 GO:0000160
Ahy6g0144 669 Pfam CCT motif 614 656 IPR010402 GO:0005515
Ahy6g0144 669 Gene3D - 32 282 - -
Ahy6g0144 669 SUPERFAMILY CheY-like 34 163 IPR011006 -
Ahy6g0144 669 MobiDBLite consensus disorder prediction 589 620 - -
Ahy6g0144 669 MobiDBLite consensus disorder prediction 600 620 - -
Ahy6g0144 669 PANTHER TWO-COMPONENT RESPONSE REGULATOR 211 653 IPR045279 GO:0009736
Ahy6g0144 669 ProSiteProfiles CCT domain profile. 614 656 IPR010402 GO:0005515
Ahy6g0144 669 MobiDBLite consensus disorder prediction 492 511 - -
Ahy6g0144 669 MobiDBLite consensus disorder prediction 179 211 - -
Ahy6g0144 669 SMART REC_2 34 149 IPR001789 GO:0000160
Ahy6g0144 669 MobiDBLite consensus disorder prediction 406 431 - -
Ahy6g0144 669 Pfam Response regulator receiver domain 36 147 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g0144 Ahy-Chr6 1791743 1796572 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g0144 609 658 Response Regulator Gene Family AT5G24470 84.000 8.66e-21 94.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Ahy6g0144 Response_reg 2.00E-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g0144 K12130 - gmx:100779346 813.913