Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g0139 ATGGATGCATACTCCTCTGGAGAAGAAGTGGTTGTTAAGACAAGAAAACCATATACAATTACGAAGCAAAGAGAACGATGGACAGAGGAGGAGCATAATCGGTTCCTAGAAGCCCTAAAGCTATATGGGCGAGCATGGCAGCGGATAGAAGAGCATATAGGAACAAAGACTGCTGTGCAAATCAGGAGCCATGCACAGAAATTCTTTTCAAAGTTGGAGAAAGAGGCCCTTGTAAAGGGTGTTCCGTTAGGACAGGCTATTGATATAGACATCCCACCACCAAGGCCCAAAAGAAAACCAAGCAATCCTTATCCCCGTAAGACCAATGTTGGCACCCCAACCTCACATAGTGGAGCAAAATATGGAAAGCTTTTCATTTCAGTTGCATCTTCACATTGTAAACAAACACTGGACTTGGAGAAAGAACCTCTACCAGAGCATAATGAAGATGAAAGGCCAACTTATGCAAACGAGAATAAGAGTGAAGGCTGCTCAAAAGTGTTTGCTGTTCTTGAGGAGGCACCCAGTTTGTCCCCATCTTCAGCAGACAAGAATTTAATACCAATGCAAAATTCATGTGCCTTGAGGGAGTATATACCTTTAGTGAAAGATGTAATAGTTGAAGATGAAGGAAATCAATCTTTTGTTACTGTTGAACATGAAAATCAGAAGTTGGGGATAGATGATGGTAAGTGCACGCAAACCAATGGCATTTGTAAAGCCTCTAAGATGGACATTTATTGTGCTTCTAAAGCCAAAATGGTTCATACTGAGAAAGCAGATGGAATTCAAGGCAGTCAGAATTACCCAAGGCATGTTACTGTGCATGTCATTGATGGGAATCATGGAACTGCTACACAAAATCCATCCCATGATACATTGTTTCGAGACTCCGTAATTCCGCAAGGAGGGGTTAATGGGCAACCAAATCATTTTACCAATCCAGCTGCATCAAACACAAGTGAAAGTCAAAATGACACAGCACGATCCTCTATTCATCAAACATTCCCCCCATGTCCTCCTTTCATGCAGCATAATCAAGAAGATTACCAATCATTTCTTCACATGTCATCCACATTTTCAAGTCTTATTGTTTCCACATTGATGCAAAACCCTGCCGCCCATGCTGCAGCAAGTTTTGCTGCAATGATTTGGCCCTGTGCAAGTGCAGAGACACCAGCAAATTCTCATTCGTGCTCTCAAGGAAGCTTTCCATCTAGCCATATTGGTTCTCCTCCAAGTGTGGCGGCTATAGCAGCTGCGACTGTAGCTGCTGCAACTGCGTGGTGGGCTGCCCATGGGCTGCTTCCTTTGTGTGCCCCACTTCATACTGCCTTTGCCTGTCCACCTTCATCAGCAACTGCAGCTCCCTTGATCAATACTGGCGAGGCATCACCCAAGACAGAGCAAGGAAACGTTGCTCCAGAAAATCCTCTGCAAGATCAGACAGCTGATCCAGAATATTCAGAAGCTCTTCATGCTCAAGATTCATCTTCTAAGTCACCAGCTGTTTCTTCATCCGAATATGAAGAGATTGGAGATGCCCAATTAAACGCTTCAACCAACGCTACTACTGATCATGGGAAGAACCAAGAAGTTTCTGAACACCTTGACCCTGACAAAGTGAATGGCAGCAAACAAGTTGACCGCTCCTCATGTGGTTCCAACTCAGCCTCTAGCAGTGAAGAAACAGATGCACTAGAGAAGGAAGAAAAAGAAAAGGAAGAGTCCAAAACACATGATGCAAACCATGTAGATACTGAGCCAATTAATCGTCGTTGTAGAAGCATTAGCTACCTTACGGATTCTTGGAAGGAGGTCTCCGAAGAGGGACGGCTGGCCTTCCAGGCTCTATTCTCCAGAGAAGTGTTACCTCAAAGTTTTTCACCTCCGCATGATTTGATAAACAAGGATCATCAGATGGGCAATATCAAACATGACAATCAGCAGGTTGAGTGCAAAGATGAAGAGGATCTTGACAGTAAGAAATGCAGTTCTCAGTGTGAAGGGGTGCAAAAAAACCTGCAATTTGAAGAAAATAAGAAAGAAGAGGAGGGACTGCTGGCCATAGGTCTTGGACAAGGTAAGCTCAAGACTCGTCGAACAGGGTTTAAACCTTACAAAAGATGTTCAGTAGATGCCAAGGAAACCAGGATTGGAATGGCCTGTAACCATGGTGAAGAGAAGGGTCCCAAGAGAATACGCCTGGAAGGGGAGGCTTCAACATGA 2229 0.4415 MDAYSSGEEVVVKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQIRSHAQKFFSKLEKEALVKGVPLGQAIDIDIPPPRPKRKPSNPYPRKTNVGTPTSHSGAKYGKLFISVASSHCKQTLDLEKEPLPEHNEDERPTYANENKSEGCSKVFAVLEEAPSLSPSSADKNLIPMQNSCALREYIPLVKDVIVEDEGNQSFVTVEHENQKLGIDDGKCTQTNGICKASKMDIYCASKAKMVHTEKADGIQGSQNYPRHVTVHVIDGNHGTATQNPSHDTLFRDSVIPQGGVNGQPNHFTNPAASNTSESQNDTARSSIHQTFPPCPPFMQHNQEDYQSFLHMSSTFSSLIVSTLMQNPAAHAAASFAAMIWPCASAETPANSHSCSQGSFPSSHIGSPPSVAAIAAATVAAATAWWAAHGLLPLCAPLHTAFACPPSSATAAPLINTGEASPKTEQGNVAPENPLQDQTADPEYSEALHAQDSSSKSPAVSSSEYEEIGDAQLNASTNATTDHGKNQEVSEHLDPDKVNGSKQVDRSSCGSNSASSSEETDALEKEEKEKEESKTHDANHVDTEPINRRCRSISYLTDSWKEVSEEGRLAFQALFSREVLPQSFSPPHDLINKDHQMGNIKHDNQQVECKDEEDLDSKKCSSQCEGVQKNLQFEENKKEEEGLLAIGLGQGKLKTRRTGFKPYKRCSVDAKETRIGMACNHGEEKGPKRIRLEGEAST* 743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g0139 742 MobiDBLite consensus disorder prediction 458 592 - -
Ahy6g0139 742 SMART sant 23 71 IPR001005 -
Ahy6g0139 742 MobiDBLite consensus disorder prediction 546 562 - -
Ahy6g0139 742 MobiDBLite consensus disorder prediction 458 484 - -
Ahy6g0139 742 ProSiteProfiles Myb-like domain profile. 19 69 IPR001005 -
Ahy6g0139 742 PANTHER SWI/SNF COMPLEX-RELATED 2 723 - -
Ahy6g0139 742 MobiDBLite consensus disorder prediction 563 591 - -
Ahy6g0139 742 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 22 71 IPR006447 GO:0003677
Ahy6g0139 742 ProSiteProfiles SANT domain profile. 22 73 IPR017884 -
Ahy6g0139 742 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 19 73 IPR017930 -
Ahy6g0139 742 MobiDBLite consensus disorder prediction 529 545 - -
Ahy6g0139 742 MobiDBLite consensus disorder prediction 86 116 - -
Ahy6g0139 742 MobiDBLite consensus disorder prediction 138 159 - -
Ahy6g0139 742 Pfam Myb-like DNA-binding domain 24 67 IPR001005 -
Ahy6g0139 742 MobiDBLite consensus disorder prediction 492 528 - -
Ahy6g0139 742 MobiDBLite consensus disorder prediction 138 157 - -
Ahy6g0139 742 Gene3D - 26 73 - -
Ahy6g0139 742 PANTHER PROTEIN LHY 2 723 - -
Ahy6g0139 742 CDD SANT 26 69 IPR001005 -
Ahy6g0139 742 SUPERFAMILY Homeodomain-like 18 74 IPR009057 -
Ahy6g0139 742 MobiDBLite consensus disorder prediction 305 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g0139 Ahy-Chr6 1760996 1769032 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Ahy6g0139 Myb_DNA-binding 2.70E-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g0139 K12133 - gmx:780540 947.192