Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g0130 ATGAAGTCACTCACAGTCACAGCCAGTGTTTTGAACCCCACAAATCAGCCACCAGTCAACAAACTCCACTTCTTCCACTCTCACTCTCTCTCAATCTCACTCTTCTTCCCACACACATCATCAAACCTAAAATGCCACCATCAAAAGCCAATCATCACAGCATGCTCTTCTTCTTCTTCGATCGAAATCGACATGGTGAAGAACAACCAAGGAATCTACACCCCTAAGCACCCCAAAGTAGTCGTCCTCTGGGACCTGGACAATAAGCCCCCACGAGGACCCCCATACGACGCCGCACGTTCCCTCACACGCCTCGCAACTCACTTTGGCCACGTCGTCGACATCTCTGCCTATGCCAATCGCCACACATTCATCCACCTCCCGCAGTGGGTCCTACAGGATCGCCGCCAGAGAAAGCACCTCGACGTGCTGGAACGGAAGGGCCTGGTGGTGCCGTCGGAGCCCTACAGGTGTTCCGTCTGCGGGAGAAAGTGTCGCACCAATCTGGATCTGAAAAAGCATTTCAGGCAGTTGCATGAACGAGAGAGGCAGAAGAAGCTTAATCGGATGAGGTCCTTGAAAGGGAAGAAACGGCAGCGTTTTAAAGAGAGGTTTATTCAGGGGAATGAAAAGTATAATGAGGCTGCTAGGTCTCTCATTAGGCCCAAGGTTGGTTATGGGCTAGCTTCAGAGCTGAGGAGGGCTGGGGTATATGTGAAGACTGTGGAGGATAAGCCTCAGGCTGCAGATTGGGCATTGAAGAGGCAGATGCAGCACTCAATGACCAGGGGGATTGATTGGCTGGTTTTGGTTTCAGATGATTCGGATTTCACAGAGATGTTGAGGAGAGCAAGAGAGAGGGAATTGGGGACAGTGGTGGTTGGGGATTGGGATAGGGCACTGGGGAGGCAAGCCGATTTGTGGTTTCCTTGGATTGATGTTGAGAATGGGAATGTCTCGGAGAAGGATCTGGTGATTGAGAAGAACAGGAGTAGAGCTCAAAGGGATGGTTTTGTCGTGGAAGATGATGATGGGTTTTTTTCATTGTCGAGCTTTGACAGTGGTGGTGGTCATGGGAGTAGTGATTTGGATGAGCTTGTAGATGAACTTGCAGCAGTGAGGACTGATTTTACTGCGACAATTTCAGATGAGGATGAAGACGATTACATGTTGGGGAGTAGTGAGGATGAGTACATAGAAGATTATGATGAAGACAGTGATCAAGAAGATGATGGGTTCTATTGA 1245 0.494 MKSLTVTASVLNPTNQPPVNKLHFFHSHSLSISLFFPHTSSNLKCHHQKPIITACSSSSSIEIDMVKNNQGIYTPKHPKVVVLWDLDNKPPRGPPYDAARSLTRLATHFGHVVDISAYANRHTFIHLPQWVLQDRRQRKHLDVLERKGLVVPSEPYRCSVCGRKCRTNLDLKKHFRQLHERERQKKLNRMRSLKGKKRQRFKERFIQGNEKYNEAARSLIRPKVGYGLASELRRAGVYVKTVEDKPQAADWALKRQMQHSMTRGIDWLVLVSDDSDFTEMLRRARERELGTVVVGDWDRALGRQADLWFPWIDVENGNVSEKDLVIEKNRSRAQRDGFVVEDDDGFFSLSSFDSGGGHGSSDLDELVDELAAVRTDFTATISDEDEDDYMLGSSEDEYIEDYDEDSDQEDDGFY* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g0130 414 Coils Coil 176 196 - -
Ahy6g0130 414 SMART c2h2final6 156 179 IPR013087 -
Ahy6g0130 414 PANTHER OS06G0166200 PROTEIN 47 374 - -
Ahy6g0130 414 CDD PIN_LabA-like 166 296 - -
Ahy6g0130 414 PANTHER - 47 374 - -
Ahy6g0130 414 ProSitePatterns Zinc finger C2H2 type domain signature. 158 179 IPR013087 -
Ahy6g0130 414 ProSiteProfiles Zinc finger C2H2 type domain profile. 156 184 IPR013087 -
Ahy6g0130 414 MobiDBLite consensus disorder prediction 384 414 - -
Ahy6g0130 414 Gene3D - 73 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g0130 Ahy-Chr6 1632700 1637603 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g0130 20 350 C2H2 Transcription Factor Family AT5G52010 66.767 5.85e-160 454
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Ahy6g0130 None None None