LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ahy6g0128	ATGGCGGTAGGAGAGGGTGGAAGAAGGGTGCTGCTACTGTTGTTGTTGTTTACCAGTAACTGCATTCTTCATTGGATGCCCGTTGCTGTTAATGGTAACACAGATCCGAATGATGCGGCCGCTATAAGGATTTTATTTCAATCTATGAACTCACCTTCACAGCTAGGTTGGCAAGCGAATGGTGATGATCCGTGTGGACAATATTGGAAAGGCATAACATGCTCAAACAACCGAGTTACAGAGATTAAGTTATCCAATCTTAAACTAACGGGAACATTGCCTTATGGATTACAACCCTTGACATCTTTGACCAACCTAGACCTGAGTAGCAACAATCTTGGAGGTGGCATACCATACCAGCTTCCTCCAAATATGCAGCGCTTAAATCTGGCTTATAATAACTTCACTGGGTCAATCCCTTACTCTATTTCTGATATGACCTCTCTTACAGACCTGAATCTTGCTCACAATCAGTTCCAGCAAGGATTGAACGTTAACTTCATGAAGCTTTCTACCCTCTCTTCATTGGATCTCTCCTTCAATTTATTGACAAGTGACCTTCCGCAGACTTTGAGCTCACTTTCAGGCATTACCAGCATGTATCTGCAGAACAACCAGTTTACAGGCACTATTGATGTCCTTGCTAATCTGCCCCTTGAAAATCTGAATGTGGAAAACAATAATTTTACTGGATGGATACCAGAACAATTGAAAAGCATAAATTTAAAGACTGGTGGTAATACATGGAGCTCCGGACCTGCACCCCCACCTCCTCCCGGGACCCCACCATTACCTAAAAGCAATCGACACCACAAAGCCGGTGGCGGAAGCACCACTACCTCCCCCTCAGATGCTGGCAGCAGTAACAACATGAGTGAAGGCAGCAAAAAATCTGGTGTTGGAGGTGGTGGCATAGCTGGAATTGTGATCTCGATAATTGTTGTTGGGGCAATAGTAGCATTCTTTTTGGTGAAGAGAAAATCCAAGAAGTCATCTTCAGATTTAGAAAAACAGGACAATCAGTCCTTTGCTCCTCTTCCCTCAGATGAATTCCATGAATTGAAATCTGTGCCACCTTCCTCTATAACTGAAATGAAGACATTTGAAACTTCTGCCTCAATAAATCTTAAACCCCCACCTATGGATCGTCATAAATCATTTGATGAGGATGAACTTTCAAAGAAGCCTGCCATTGTCAAGAAGACTGTCACATCTCCTGCTAATGTGAAATCATACTCTATAGCTGATCTACAGATTTCAACTGGAAGCTTCAGTATTGATCATCTTGTTGGTGAAGGGTCCTTTGGTCGTGTTTACCGGGCTCAGTTTGATGATGGAAAGGTTCTTGCAGTGAAGAAAATAGATTCATCTGTCCTTCCCAATGACCTTTCTGAAGAATTTACAGAAATAGTTTCAAACATCTCCCATTTACATCATCCGAACGTGACAGAACTAGTAGGTTATTGTTCAGAGTATGGGCAGCACCTCTTAGTCTATGAGTTTCATAGAAATGGATCACTGCATGACTTCCTTCACCTATCAGATGAATATAGTAAGCCATTGATATGGAATTCCCGTGTGAAGATTGCATTGGGGACTGCGCGTGCTTTAGAGTACCTACATGAAGTTTGTTCACCATCGGTTGTACACAAGAACATTAAATCAGCCAACATATTACTTGATGCAGAACTTAATCCTCATCTTTCAGACAGTGGATTAGCAAGCTATATTCCAAATGCAGACCAGGTGTTGAACCAAAACGCCGGATCTGGATACGACGCACCTGAAGTTGCTTTGTGTGGTCAGTATACCATGAAAAGTGATGTTTATTGCTTTGGGGTCGTGATGTTGGAGCTACTCAGCGGACGTAAACCATTTGATAGCTCGAGACCTAGAGCTGAGCAGTCTCTAGTTCGTTGGGCCGCACCTCAACTCCATGATATTGATGCATTGACTAAAATGGTTGATCCTGCGCTGAAAGGGTTATATCCTGTTAAATCTTTGTCTCGTTTTGCAGATGTTATTGCTCTCTGCGTTCAGCTGGAGCCTGAATTCCGACCACCAATGTCAGAAGTGGTTCAAGCCTTGGTACGGTTGGTGCAGCGAGCCAACATGAGCAGGCGGACTACTTTTGGATCTGATCATGGAGGATCCAATCGAGGGAGTGATGAACCCGCCATACATGATGTGTAA	2193	0.4327	MAVGEGGRRVLLLLLLFTSNCILHWMPVAVNGNTDPNDAAAIRILFQSMNSPSQLGWQANGDDPCGQYWKGITCSNNRVTEIKLSNLKLTGTLPYGLQPLTSLTNLDLSSNNLGGGIPYQLPPNMQRLNLAYNNFTGSIPYSISDMTSLTDLNLAHNQFQQGLNVNFMKLSTLSSLDLSFNLLTSDLPQTLSSLSGITSMYLQNNQFTGTIDVLANLPLENLNVENNNFTGWIPEQLKSINLKTGGNTWSSGPAPPPPPGTPPLPKSNRHHKAGGGSTTTSPSDAGSSNNMSEGSKKSGVGGGGIAGIVISIIVVGAIVAFFLVKRKSKKSSSDLEKQDNQSFAPLPSDEFHELKSVPPSSITEMKTFETSASINLKPPPMDRHKSFDEDELSKKPAIVKKTVTSPANVKSYSIADLQISTGSFSIDHLVGEGSFGRVYRAQFDDGKVLAVKKIDSSVLPNDLSEEFTEIVSNISHLHHPNVTELVGYCSEYGQHLLVYEFHRNGSLHDFLHLSDEYSKPLIWNSRVKIALGTARALEYLHEVCSPSVVHKNIKSANILLDAELNPHLSDSGLASYIPNADQVLNQNAGSGYDAPEVALCGQYTMKSDVYCFGVVMLELLSGRKPFDSSRPRAEQSLVRWAAPQLHDIDALTKMVDPALKGLYPVKSLSRFADVIALCVQLEPEFRPPMSEVVQALVRLVQRANMSRRTTFGSDHGGSNRGSDEPAIHDV*	731

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Ahy6g0128	730	ProSitePatterns	Protein kinases ATP-binding region signature.	430	453	IPR017441	GO:0005524
Ahy6g0128	730	PANTHER	OS01G0253100 PROTEIN	24	724	IPR045271	GO:0004714\|GO:0006468
Ahy6g0128	730	CDD	STKc_IRAK	430	699	-	-
Ahy6g0128	730	SUPERFAMILY	Protein kinase-like (PK-like)	405	696	IPR011009	-
Ahy6g0128	730	MobiDBLite	consensus disorder prediction	272	296	-	-
Ahy6g0128	730	MobiDBLite	consensus disorder prediction	330	355	-	-
Ahy6g0128	730	Gene3D	Transferase(Phosphotransferase) domain 1	503	715	-	-
Ahy6g0128	730	MobiDBLite	consensus disorder prediction	708	730	-	-
Ahy6g0128	730	MobiDBLite	consensus disorder prediction	243	300	-	-
Ahy6g0128	730	Pfam	Leucine rich repeat N-terminal domain	36	75	IPR013210	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Ahy6g0128	Ahy-Chr6	1612134	1618454	Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Ahy6g0128	8	709	Strubbelig Receptor Gene Family	AT1G53730	65.303	0.0	846

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Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-V	Ahy6g0128		PK_Tyr_Ser-Thr	4.90E-40	CL0016

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ahy6g0128	-		-	aip:107646143	1337.78

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