Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g0083 ATGGATTCTGCAAGAAGTTGGCTTCACAAATTTCAGCCACGAGAGAAAGGGAAGAGCGCTAGCAGAAGGAAAGAAGGTGATGGAGAAGAGGATAATAATGGTGCTCCCATGGATGAAGCAGCTCTTTCAAATGTCACAAAGCAGAAGGTTGCAGCAGCCAAACAGTATATTGAGAATCATTACAAAGAGCAAATGAAGAGCCTTCAGGAAAGGAAGGAGCGTCGAACCATCTTGGAAAAGAAGTTAGCTGATGCTGATGTGTCTGAGGAGGATCAAAACAACCTACTTAAATTTCTAGAGAAAAAAGAAACTGAATATATGCGCCTTCAGAGGCATAAGATGGGAGTTGATGATTTCGAGTTATTGACCATGATTGGCAAAGGTGCATTTGGAGAGGTTAGAGTATGTAGAGAAAAGACAACAGGTCATGTATATGCAATGAAAAAATTAAAGAAAGCAGAGATGCTTCGTAGAGGCCAGGTAGAACATGTTAGAGCCGAGAGAAATCTCCTTGCCGAGGTTGACAGCAATTGCATAGTCAAACTTTATTGTTCTTTTCAAGATGAGGATCATCTGTATCTTATTATGGAGTACCTACCTGGTGGGGATATGATGACTCTACTTATGAGAAAGGACATCTTGACTGAAGATGAAACCCGTTTTTATATAGGAGAAACCGTTCTGGCTATTGAGTCTATACATAAACACAATTACATACATAGGGATATTAAGCCTGATAACTTATTGCTCGATAGATTCGGACATGTGAGGCTGTCAGATTTTGGACTTTGTAAACCATTAGACTGTAGTACACTTGAAGAAGCAGATCTTTCTGTAGGTCAAAATCTTCAGGGATCTGCACAAAATGATGGCACAACTCCAAAACGCACACAACAAGAACAGTTGGAACACTGGCAGCAAAACAGAAGGACTCTTGCCTATTCTACTGTTGGTACACCTGATTATATTGCTCCAGAAGTCTTATTGAAAAAGGGTTATGGGATGGAGTGTGATTGGTGGTCACTTGGAGCCATTATGTATGAAATGTTGGTGGGATATCCACCTTTTTATTCTGATGATCCAATGTCAACATGTAGGAAGATAGTAAACTGGAAATCTCACTTGAAATTTCCAGAAGAAGCGAGACTATCTCCAGAGGCTAAAGATCTTATTAGTAAGCTTTTGTGTAACGTCCCTCAGAGGCTAGGATCAAATGGTGCAGATGAAATAAAGGCTCATCCATTTTTTAATGGTGTTGTTTGGGACAAGTTGTATCAAATGGAAGCTGCATTTATTCCTGAAGTCAATGATGAGTTAGATACTCAAAATTTTGAAAAGTTTGAAGAGTCAGATAACCATGTTCTGAAATCAGCATCAAGATCTGGTCCATGGAGAAAGATGCTTTCATCTAAGGACATGAATTTTGTGGGATATACATACAAGAACTTTGAAATTGTCAATGACTATCAAGTTCCTGGAATGGCTGAATTGAAGAAGAAAAGTTCCAGATCAAAGAAGCCATCCATCAAGTCACTCTTCGATGTTGATCCTGAGGGATCAGAGTTGTCCGAGGCTGTAGATGCATCTGCAACCAACCAATCAGAGGAATCCCATAACAAGAATGAATGA 1629 0.3966 MDSARSWLHKFQPREKGKSASRRKEGDGEEDNNGAPMDEAALSNVTKQKVAAAKQYIENHYKEQMKSLQERKERRTILEKKLADADVSEEDQNNLLKFLEKKETEYMRLQRHKMGVDDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKAEMLRRGQVEHVRAERNLLAEVDSNCIVKLYCSFQDEDHLYLIMEYLPGGDMMTLLMRKDILTEDETRFYIGETVLAIESIHKHNYIHRDIKPDNLLLDRFGHVRLSDFGLCKPLDCSTLEEADLSVGQNLQGSAQNDGTTPKRTQQEQLEHWQQNRRTLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPMSTCRKIVNWKSHLKFPEEARLSPEAKDLISKLLCNVPQRLGSNGADEIKAHPFFNGVVWDKLYQMEAAFIPEVNDELDTQNFEKFEESDNHVLKSASRSGPWRKMLSSKDMNFVGYTYKNFEIVNDYQVPGMAELKKKSSRSKKPSIKSLFDVDPEGSELSEAVDASATNQSEESHNKNE* 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g0083 542 Gene3D Phosphorylase Kinase; domain 1 435 449 - -
Ahy6g0083 542 SMART pkinase_C_6 417 482 IPR000961 GO:0004674|GO:0005524|GO:0006468
Ahy6g0083 542 ProSiteProfiles AGC-kinase C-terminal domain profile. 417 490 IPR000961 GO:0004674|GO:0005524|GO:0006468
Ahy6g0083 542 ProSiteProfiles Protein kinase domain profile. 119 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy6g0083 542 Pfam Protein kinase C terminal domain 435 480 IPR017892 GO:0004674|GO:0005524|GO:0006468
Ahy6g0083 542 Gene3D Phosphorylase Kinase; domain 1 90 202 - -
Ahy6g0083 542 ProSitePatterns Serine/Threonine protein kinases active-site signature. 238 250 IPR008271 GO:0004672|GO:0006468
Ahy6g0083 542 Pfam Protein kinase domain 120 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy6g0083 542 SMART serkin_6 119 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy6g0083 542 SUPERFAMILY Protein kinase-like (PK-like) 92 459 IPR011009 -
Ahy6g0083 542 ProSitePatterns Protein kinases ATP-binding region signature. 125 148 IPR017441 GO:0005524
Ahy6g0083 542 CDD STKc_NDR_like 117 481 - -
Ahy6g0083 542 Gene3D Transferase(Phosphotransferase) domain 1 313 434 - -
Ahy6g0083 542 MobiDBLite consensus disorder prediction 1 31 - -
Ahy6g0083 542 MobiDBLite consensus disorder prediction 499 542 - -
Ahy6g0083 542 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 39 520 - -
Ahy6g0083 542 PANTHER SERINE/THREONINE-PROTEIN KINASE 39 520 - -
Ahy6g0083 542 Gene3D Transferase(Phosphotransferase) domain 1 203 280 - -
Ahy6g0083 542 MobiDBLite consensus disorder prediction 281 300 - -
Ahy6g0083 542 MobiDBLite consensus disorder prediction 1 39 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g0083 Ahy-Chr6 1144336 1149123 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g0083 1 513 AGC Kinase Gene Family AT2G20470 78.185 0.0 843
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Ahy6g0083 Pkinase 1.70E-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g0083 K08790 - gmx:100805940 929.472
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g1376 16 27385166 27390055 Ahy6g0083 6 1144336 1149123 hybridization
Ahy6g0083 6 1144336 1149123 Ahy12g1262 12 41014904 41026850 PCT
Ahy6g0083 6 1144336 1149123 Ahy2g1169 2 45700551 45711346 PCT
Ahy12g0954 12 19983761 19991818 Ahy6g0083 6 1144336 1149123 PCT
Ahy9g1212 9 33418911 33426409 Ahy6g0083 6 1144336 1149123 PCT