Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g0074 ATGGGAAATGGAAATAGGCAGGGGAGGAGGAAGAAGAGGAGGAGTTTGAAAAACATGATGCAGTGCCTGTGCTCAGGGGAGCAGTTGAGACGAGAAGGAGGCATGGATGAGATGGCAGTTCCTTCGTCATCGGATTCTCTTGCCACTAAGGACTATTATTCGGCCACGACTGGCAGCGGCCGTTCTGGACAGGATGGACAACTTCAAAGGAGGCTGGATGCAGGAAATATCGAAGAAGCTGAATCGTCTTTGCGTGAGGCCGGCTGCTTGAATTATGAGGAAGCTAGAGCTCTGTTAGGAAGATATGAATATCAGAAAGGGAATATAGAAGCTGCTTTACATGTTTTTGAGGGAATAAATATAGACTCTGTGACTCCAGAGATAAAAATTTCTCTTGCCAAAATAAAAGAGAACCATAGGAGACATTCCAAGAATTATGTTCCGCCGCCAATGTCTGTACATACTGTTGGCACACTGTTTGAAGCAGTTTTCCTTAAAGCACAATGTTTGCAGGCTCTGGGAAGGTTTAAAGAAGCTGCCCAATCTTGCAAAGTTATTCTGGACATAGTTGACTCTTTGTTGCCTGAAGGCTCGTGTAAAAACTTTGGTGCTGAATGTAAATTGCAGGACACTGTAACTAAGGCAGTTGAGCTACTTCCAGAATTATGGAAACTTGCTGATTGTCCACATGAAGTTATCATGGCTTACCGACAGGCTCTCCTACGTCGGTGGAACCTTTCCTCCGAGACCATAGCAAAGATTCAGAAAGAATTTGCTGCTTTTCTTCTTTATAGCGGAGCGGAAGTAATCCCCCCAGATCTCCGTTCACAAAAGGAAAACTCATTTGTGCCCAGAAACAACATAGAAGAGGCTATACTAATTTTAATTATTTTGCTAAGAAAAGTCTCTTTGAATGAAATTGAGTGGGATCCTTCAATTTTGGACCACCTTTCATTTGCTCTGTCGGTTTCAGGGGATTTGACAGCTTTAGCCAATCAATGGGAAGAATTGCTTCCTGGGACTATTAATCGAGGAGAAAGATATTATGCCCTTGCTCTTTGTTATTATGGTGCTGGTCAAGATCTGGTAGCATTGAATCTTCTTAAAAAATTATTAAGTAGCAACGAAGATCCAAAACATGTTCCAGCTTTGTTGATGGCTTCTAACATTTGTTGCAAGAACCCCAATCTTGCAGAAGATGGGGTCAACTATGCTCGCCGAATGCTAGAGAACTTGAATGGCAGATGTGACCAGTTGGAAAGTCGTGCAAATTGCTTACTTGGTATTTCACTTTCAGCACACTCAAAAATAGCTGTTTCTGATTCCGAGCGGATTCGGAGACAGTCCAAGGCACTTCAGTTTCTGGAAACTGCAAGGAGAATGACTAGAATGAGAGACCCATTTATATTGTACTATCTTAGTTTAGAATATGCAGATCAAAGGGAGTTGGATTCTGCACTTCATTATGCTGAGTGCTTTCTGGAACTGGAAGCTAGGGCTAGTATTAAAGGGTGGTTGTTGTTAGCCCGGATATTATCAGCACAAAAACGGTTTTTGGATGCTGAATCTGTTGTTAATGCTGCTTTGGATCAGACTGCAAAATGGGATCAAGGAGAACTGTTGCGAACAAAAGCTAAACTGCAAATTGCACAGGGCCAGTTAAGGAGTGCCTTTGAGACATATGTTCAGCTTCTTTCTATTCTTCATATTCAACGGAAAACTTTTGGTCAATGGAAGAAGCTGTGTAAGGATTCTAGAGATCATGCTTGGAACTTGGAATTGGAATTATGGCATGATCTTGCTTATGTCTATATATCTCTGTCATGTTGGCATGATGCAGAGATGTGTCTTTCTAGATCTAAAGCCATAAAACCATACACTGCATCAAGGTTGCATGCACTGGGTACAATGCACGAGGCAAAGGGCCTTTACAAGGAGGCTCTAAAAGCATTTCGAGATGCTTTGGATATCGATTCGGGACATGTCCCTAGCTTGATATCCGCTGCTGTGGTTCTTAGACAGTTCAATGGTCAGTCAAATGCTGCCATCAGAAGCTTTCTGATGGACGCACTACGGCATGACAGGATGAACGCTTCTGCATGGTACAATCTTGGCATTCTTCACAAGGCCGAGAATAAAATATCAGAAGCTGCAGAATGTTTTGAGGCAGCAAACTCCCTAGAAGAATCAGCACCAGTTGAACCATTCAGATGA 2214 0.4259 MGNGNRQGRRKKRRSLKNMMQCLCSGEQLRREGGMDEMAVPSSSDSLATKDYYSATTGSGRSGQDGQLQRRLDAGNIEEAESSLREAGCLNYEEARALLGRYEYQKGNIEAALHVFEGINIDSVTPEIKISLAKIKENHRRHSKNYVPPPMSVHTVGTLFEAVFLKAQCLQALGRFKEAAQSCKVILDIVDSLLPEGSCKNFGAECKLQDTVTKAVELLPELWKLADCPHEVIMAYRQALLRRWNLSSETIAKIQKEFAAFLLYSGAEVIPPDLRSQKENSFVPRNNIEEAILILIILLRKVSLNEIEWDPSILDHLSFALSVSGDLTALANQWEELLPGTINRGERYYALALCYYGAGQDLVALNLLKKLLSSNEDPKHVPALLMASNICCKNPNLAEDGVNYARRMLENLNGRCDQLESRANCLLGISLSAHSKIAVSDSERIRRQSKALQFLETARRMTRMRDPFILYYLSLEYADQRELDSALHYAECFLELEARASIKGWLLLARILSAQKRFLDAESVVNAALDQTAKWDQGELLRTKAKLQIAQGQLRSAFETYVQLLSILHIQRKTFGQWKKLCKDSRDHAWNLELELWHDLAYVYISLSCWHDAEMCLSRSKAIKPYTASRLHALGTMHEAKGLYKEALKAFRDALDIDSGHVPSLISAAVVLRQFNGQSNAAIRSFLMDALRHDRMNASAWYNLGILHKAENKISEAAECFEAANSLEESAPVEPFR* 738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g0074 737 SMART tpr_5 502 535 IPR019734 GO:0005515
Ahy6g0074 737 SMART tpr_5 628 661 IPR019734 GO:0005515
Ahy6g0074 737 SMART tpr_5 594 627 IPR019734 GO:0005515
Ahy6g0074 737 SMART tpr_5 345 378 IPR019734 GO:0005515
Ahy6g0074 737 SMART tpr_5 698 731 IPR019734 GO:0005515
Ahy6g0074 737 SMART tpr_5 160 193 IPR019734 GO:0005515
Ahy6g0074 737 Pfam Tetratricopeptide repeat 698 729 IPR019734 GO:0005515
Ahy6g0074 737 Pfam Tetratricopeptide repeat 630 659 IPR019734 GO:0005515
Ahy6g0074 737 SUPERFAMILY TPR-like 159 377 IPR011990 GO:0005515
Ahy6g0074 737 MobiDBLite consensus disorder prediction 33 69 - -
Ahy6g0074 737 Gene3D Tetratricopeptide repeat domain 154 572 IPR011990 GO:0005515
Ahy6g0074 737 Coils Coil 402 422 - -
Ahy6g0074 737 Gene3D Tetratricopeptide repeat domain 573 733 IPR011990 GO:0005515
Ahy6g0074 737 PANTHER PROTEIN NPG1 12 737 IPR043376 -
Ahy6g0074 737 SUPERFAMILY TPR-like 345 567 IPR011990 GO:0005515
Ahy6g0074 737 ProSiteProfiles TPR repeat profile. 628 661 IPR019734 GO:0005515
Ahy6g0074 737 PANTHER TETRATRICOPEPTIDE-LIKE HELICAL DOMAIN-CONTAINING PROTEIN-RELATED 12 737 - -
Ahy6g0074 737 ProSiteProfiles TPR repeat profile. 698 731 IPR019734 GO:0005515
Ahy6g0074 737 MobiDBLite consensus disorder prediction 42 66 - -
Ahy6g0074 737 SUPERFAMILY TPR-like 541 728 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g0074 Ahy-Chr6 1061716 1066739 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g0074 10 737 Calmodulin-binding Proteins AT4G28600 54.704 0.0 753
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g0074 K21843 - gmx:100784353 999.964
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g1391 16 27811168 27816288 Ahy6g0074 6 1061716 1066739 hybridization
Ahy2g0890 2 17853722 17861528 Ahy6g0074 6 1061716 1066739 PCT