Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g0055 ATGTCTACAACACTACCTCCTTCTTCTTCTTCTGTTGGATCGTCTAATACCCTTTTGAATGAGATCCTTTCTTTGCCAGTTTTGGAACTTGTAGCAACGTGTGCCAACTTGGCACTGCTGCTTGTGTTTCTCATTGTTATCTTTTCAAGAAAGGTGCTTGGGAACGTGGGAAGTGTTAGATATGACAATAAGGATGATATTGCAAGCAATGGTGGCGCAGTTAGTCCTAGAGTTGTTGATGCACAAACACATCAAGTTAGGATTGGTACATGGTTCAAGCTTTCGGTCTTGTCTTGTCTCTATGTTCTGTTGGTGCAACTTGTGGTGTTGGGGTTTGATGCTGTAGCTTTGATTCAGGGAAAGGGTAATTTGTCTGTAATTTTGTTGCCAGTTTCTCAGGGTTTGTCTTGGATTGTGTTGAGCTTCTTGGCTTTAAATTGCAAGGCTCAGAGGCTTGATAGGTTTCCATTTTTGTTGAGAGTTTGGTGGAGTGTGTCATTTGTTATTTGCTTGTGCACTTTGTATGTTGATGGGAGGGGGTTATGGGATGAAGGTTACAAGCATTTGCAGTCCCATGTGGTGGCGAATTTCGCAGCCACGCCTGCACTTGCCTTCTTGTGTATTGTTGCAGCTAGGGGTGCTACCGGTATTGAAGTCTGTGGGGATTCGGATTTTCGAGAGCCGTTGCTTGCTGAAGAAGAATCAGGGTGTGTGAAGGTTACTCCATACAGTGATGCTGGAATTTTTAGCCTGGCTACTCTGTCTTGGCTGAACCCAATTCTTTCCCTCGGCGCAAGGCGACCATTGGAGCTTAAGGACATTCCCCTAGTGGCACGAAAAGATCGAGCTAAGACAAATTACAAGATTTTGAATTCTAATTGGGAGAGATTGAAGGCTGAAAATTCGTCCGGACAGCCTTCGTTAGCTTGGGCACTTCTCAGATCATTTTGGAAGGAAGCAGCTTGGAATGCCATCTTTGCTGGTTTGAATACTCTTGTTTCTTATGTTGGTCCTTACATGGTAAGCTACTTTGTTGATTACTTGAGTGGCAAACAAAGTTATCCGAACGAGGGCTATGTCCTCGCTGGGATATTCTTCGTGGCGAAGCTTGTTGAGACCTTTACAACTCGTCAATGGTATCTAGGAGTGGATATCTTGGGCATGCATGTTAGATCAGCTCTAACAGCGATGGTGTATCGAAAGGGGCTTAGACTCTCGAGCTTAGCGAAGCAAAGTCACACAAGTGGAGAGATTGTTAACTACATGGCTGTAGATGTTCAAAGAGTAGGGGACTACTCTTGGTACCTTCATGATATGTGGATGCTTCCTATGCAGATTGTTCTTGCCCTTCTAATCTTGTACAAGAACGTTGGAATTGCTTGTATTGCAACACTGATTGCTACCATCATTTCAATTGTTGTCACTGTTCCAGTAGCTAGGATCCAAGAAGATTATCAAGACAAGTTAATGGCTGCAAAAGATGAAAGGATGAGAAAAACATCTGAGTGCTTAAGGAACATGAGGATTCTCAAGTTGCAAGCTTGGGAAGACAGGTATCAAATAAAGTTAGAGGAGATGCGTGGAGTCGAGTTCAAATGGCTTCGAAAAGCGTTGTACTCGCAGGCTTTCATAACATTCATATTCTGGAGCTCCCCCATTTTTGTTTCAGCTGTCACTTTCGCTACATGCATATTGCTGGGTGGAGAGTTGACTGCAGGTGGTGTGCTTTCTGCTTTGGCTACTTTTAGAATCCTCCAAGAACCTCTCAGGAATTTTCCGGACTTGGTTTCAACAATGGCTCAGACTAAGGTTTCGATTGATCGAATATCTTGTTTCCTGCTTGAGGAAGAGTTGCAGGAAGATGCAACTATTGTCTTACCTCATGGAATCTCTAATGTTGCAGTAGAAATTAAGGATGGCATCTTCTGTTGGGACCCTTCTTCATCTTCTAGACCAACTCTATCAGGGATTCATATGAAGGCCGAAAAAGGAATGCGTGTGGCTGTTTGTGGTATGGTTGGTTCTGGGAAATCAAGTTTTCTTTCTTGCATCCTTGGAGAGATTCCTAAGCTTTCCGGCGAAGTAAGGGTGTGCGGCTTGTCTGCATATGTCTCGCAATCAGCATGGATACAGTCTGGAAACATAGAGGAAAATATTCTGTTTGGAAGCCCAATGGACAAAGCAAAGTACAAGAATGTTCTTCATGCTTGTTCTCTTAAGAAGGACTTGGAGCTTTTCTCACATGGTGATCAAACAATTATTGGTGATAGAGGCATAAACCTGAGTGGTGGCCAGAAGCAGCGTGTTCAGCTCGCACGAGCACTCTACCAAGATGCTGATATTTATCTTCTTGATGATCCCTTTAGTGCAGTTGATGCTCACACCGGATCAGAATTGTTTAGGGAGTATATATTGACAGCACTAGCAAATAAAACAGTAATCTATGTGACACATCAAGTTGAATTTCTTCCTGCTGCTGATTTGATACTGGTTCTCAAAGAAGGCTGCATCATACAAGCTGGAAAATATGATGATCTCTTACAAGCAGGAACAGATTTTAATGCTCTAGTTTCTGCTCACCATGAAGCCATAGAGGCTATGGAAATTCCTAGTTTCTCATCTGAAGATTCCGAAGAACATTTATCCTTAAATGCATTGGTTATATCCAGTAAGAAGTCTATTTGTTCCACAAATGATATTGACAATTTGGCAAAGGAACTGCAAGAGGGATCATCGAATTCAGATCAAAAAGCGATTAAGGAGAAGAAGAAAACAAAACGCTCAAGGAAAAAGCAACTAGTTCAAGAAGAGGAGAGGGTCAGAGGTAGAATCAGCATGAAGGTTTATTTGTCATACATGGCAGCAGCATATAAAGGGTTATTGATTCCTCTCATAATCATGGCGCAAACGTTCTTTCAGTTTCTACAGATTGCTAGTAATTGGTGGATGGCTTGGGCTAACCCACAAACTGAAGGAGACCTGCCAAAAGTATCTCCCACAGAGCTTCTTGTTGTTTACATGGCCCTCGCTTTCGGCAGCTCCTGCTTTATATTTGTAAGGGCTATTCTGGTGGCTACATTTGGCCTTGCAGCAGCTCAGAAGCTGTTCTTGAAGATGCTTAGAAGTGTTTTCCATGCACCAATGTCTTTCTTCGACTCTACACCTGCCGGACGGATCTTGAATCGTGTATCAGTTGATCAAAGTGTTGTGGATCTTGACATTCCTTTCAGACTCGGTGGCTTCGCTTCGACAATAATACAACTTATTGGTATTGTTGGTGTGATGACAGAAGTCACATGGCAAGTTTTGCTCCTAGTTATCCCAATGGGTGTTGCTTGTTTGTGGATGCAGAAATACTATATGGCTTCCTCGAGGGAACTAGTCCGAATTGTAAGCATCCAGAAGTCTCCAATCATAAATCTTTTTGCTGAATCAATTGCTGGAGCTTCTACAATAAGAGGATTTGGACAAGAAAAGAGGTTTATGAAGCGAAATCTCTATCTTCTAGATTGCTTTGCTCGGCCATTCTTCTGCAGTCTTGCTGCTATCGAATGGCTCTGCTTGCGGATGGAGTTACTGTCAACTTTTGTATTTGCTTTCTGCATGGTATTACTTGTAAGCTTCCCCCATGGAAGCATTGATCCCAGCATGGCTGGACTTGCTGTGACTTATGGACTCAATTTGAATGCACGTTTATCGAGATGGATACTTAGCTTCTGCAAACTCGAAAATAAAATCATTTCTATTGAAAGAATTTACCAATACAGTCAAATTCCAAGTGAAGCACCAGCAATCATTGAAGATTTTCGCCCTCCACCCTCATGGCCTGAAAATGGAACAATTGAAATAATTGATCTGAAGGTGCGGTACAAGGAGAATCTTCCTGTGGTACTTCATGGAGTGTCATGCACATTTCCAGGCGGAAAAAAGATCGGAATAGTTGGACGTACCGGTAGTGGCAAATCAACTTTAATTCAGGCATTGTTTCGGTTGATTGAACCATCTGATGGGAGGATACTTATAGACAACATTGATATTTTACATATTGGTCTTCATGATCTTAGGAGTCATCTAAGTATCATACCACAAGATCCAACCTTATTTGAAGGGACCATCCGTGGCAATCTTGATCCTCTTGATGAGCACTCTGATCAACACATCTGGGAGGCATTGGACAAGTCTCAACTTGGAGATATTATCCGTGAAAAGGACCAAAAGCTTGACACACCAGTGCTGGAAAATGGAGACAATTGGAGCGTAGGACAGCGGCAACTTGTTTCCCTAGGCCGAGCTCTTCTGAAGCAATCAAAAATACTTGTACTCGATGAAGCAACAGCATCAGTTGATACTGCCACGGATAATCTTATCCAGAAGATTATCCGTGACGAGTTTAAAGATTGTACTGTCTGCACCATTGCGCATCGCATTCCAACCGTTATAGACAGTGATCTTGTTCTAGTACTTAGTGATGGTGTGTCACTGCATTGCCATACACATTATATTATTTGTTCTGTGCTTGCTAATAAAGTTATTCTTCACACAGGTAGAGTTGCAGAATTCGACATTCCATCGCGACTATTAGAGGATAAAACCTCCATGTTTTTGAAGTTGGTGGCGGAGTATTCGTCAAGATCAAGTGGCATCCCAGCAGGATAG 4656 0.425 MSTTLPPSSSSVGSSNTLLNEILSLPVLELVATCANLALLLVFLIVIFSRKVLGNVGSVRYDNKDDIASNGGAVSPRVVDAQTHQVRIGTWFKLSVLSCLYVLLVQLVVLGFDAVALIQGKGNLSVILLPVSQGLSWIVLSFLALNCKAQRLDRFPFLLRVWWSVSFVICLCTLYVDGRGLWDEGYKHLQSHVVANFAATPALAFLCIVAARGATGIEVCGDSDFREPLLAEEESGCVKVTPYSDAGIFSLATLSWLNPILSLGARRPLELKDIPLVARKDRAKTNYKILNSNWERLKAENSSGQPSLAWALLRSFWKEAAWNAIFAGLNTLVSYVGPYMVSYFVDYLSGKQSYPNEGYVLAGIFFVAKLVETFTTRQWYLGVDILGMHVRSALTAMVYRKGLRLSSLAKQSHTSGEIVNYMAVDVQRVGDYSWYLHDMWMLPMQIVLALLILYKNVGIACIATLIATIISIVVTVPVARIQEDYQDKLMAAKDERMRKTSECLRNMRILKLQAWEDRYQIKLEEMRGVEFKWLRKALYSQAFITFIFWSSPIFVSAVTFATCILLGGELTAGGVLSALATFRILQEPLRNFPDLVSTMAQTKVSIDRISCFLLEEELQEDATIVLPHGISNVAVEIKDGIFCWDPSSSSRPTLSGIHMKAEKGMRVAVCGMVGSGKSSFLSCILGEIPKLSGEVRVCGLSAYVSQSAWIQSGNIEENILFGSPMDKAKYKNVLHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRVQLARALYQDADIYLLDDPFSAVDAHTGSELFREYILTALANKTVIYVTHQVEFLPAADLILVLKEGCIIQAGKYDDLLQAGTDFNALVSAHHEAIEAMEIPSFSSEDSEEHLSLNALVISSKKSICSTNDIDNLAKELQEGSSNSDQKAIKEKKKTKRSRKKQLVQEEERVRGRISMKVYLSYMAAAYKGLLIPLIIMAQTFFQFLQIASNWWMAWANPQTEGDLPKVSPTELLVVYMALAFGSSCFIFVRAILVATFGLAAAQKLFLKMLRSVFHAPMSFFDSTPAGRILNRVSVDQSVVDLDIPFRLGGFASTIIQLIGIVGVMTEVTWQVLLLVIPMGVACLWMQKYYMASSRELVRIVSIQKSPIINLFAESIAGASTIRGFGQEKRFMKRNLYLLDCFARPFFCSLAAIEWLCLRMELLSTFVFAFCMVLLVSFPHGSIDPSMAGLAVTYGLNLNARLSRWILSFCKLENKIISIERIYQYSQIPSEAPAIIEDFRPPPSWPENGTIEIIDLKVRYKENLPVVLHGVSCTFPGGKKIGIVGRTGSGKSTLIQALFRLIEPSDGRILIDNIDILHIGLHDLRSHLSIIPQDPTLFEGTIRGNLDPLDEHSDQHIWEALDKSQLGDIIREKDQKLDTPVLENGDNWSVGQRQLVSLGRALLKQSKILVLDEATASVDTATDNLIQKIIRDEFKDCTVCTIAHRIPTVIDSDLVLVLSDGVSLHCHTHYIICSVLANKVILHTGRVAEFDIPSRLLEDKTSMFLKLVAEYSSRSSGIPAG* 1552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g0055 1551 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 964 1234 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Ahy6g0055 1551 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 324 601 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Ahy6g0055 1551 CDD ABC_6TM_ABCC_D2 962 1256 IPR044726 GO:0140359
Ahy6g0055 1551 MobiDBLite consensus disorder prediction 908 932 - -
Ahy6g0055 1551 ProSitePatterns ABC transporters family signature. 761 775 IPR017871 GO:0005524
Ahy6g0055 1551 Gene3D - 1264 1540 IPR027417 -
Ahy6g0055 1551 CDD ABC_6TM_ABCC_D1 322 609 IPR044746 GO:0140359
Ahy6g0055 1551 Pfam ABC transporter 1298 1446 IPR003439 GO:0005524
Ahy6g0055 1551 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 631 858 IPR027417 -
Ahy6g0055 1551 Gene3D ABC transporter type 1, transmembrane domain 923 1262 IPR036640 GO:0005524|GO:0016021
Ahy6g0055 1551 Gene3D ABC transporter type 1, transmembrane domain 294 617 IPR036640 GO:0005524|GO:0016021
Ahy6g0055 1551 CDD ABCC_MRP_domain2 1279 1491 - -
Ahy6g0055 1551 PANTHER MULTIDRUG RESISTANCE PROTEIN ABC TRANSPORTER FAMILY PROTEIN 82 1549 - -
Ahy6g0055 1551 SUPERFAMILY ABC transporter transmembrane region 309 615 IPR036640 GO:0005524|GO:0016021
Ahy6g0055 1551 SMART AAA_5 1307 1492 IPR003593 -
Ahy6g0055 1551 SMART AAA_5 663 844 IPR003593 -
Ahy6g0055 1551 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1272 1499 IPR027417 -
Ahy6g0055 1551 CDD ABCC_MRP_domain1 635 835 - -
Ahy6g0055 1551 Gene3D - 618 877 IPR027417 -
Ahy6g0055 1551 Coils Coil 919 939 - -
Ahy6g0055 1551 Pfam ABC transporter transmembrane region 971 1206 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Ahy6g0055 1551 Pfam ABC transporter transmembrane region 325 589 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Ahy6g0055 1551 Coils Coil 280 300 - -
Ahy6g0055 1551 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1281 1539 IPR003439 GO:0005524
Ahy6g0055 1551 Pfam ABC transporter 654 788 IPR003439 GO:0005524
Ahy6g0055 1551 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 82 1549 - -
Ahy6g0055 1551 SUPERFAMILY ABC transporter transmembrane region 962 1261 IPR036640 GO:0005524|GO:0016021
Ahy6g0055 1551 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 635 859 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g0055 Ahy-Chr6 803728 811884 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g0055 635 852 Calmodulin-binding Proteins AT2G36910 31.197 9.91e-20 94.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g1414 16 28956916 28964452 Ahy6g0055 6 803728 811884 hybridization
Ahy6g0055 6 803728 811884 Ahy12g1027 12 23206739 23214687 PCT
Ahy6g0055 6 803728 811884 Ahy2g0940 2 20264377 20272304 PCT
Ahy12g1027 12 23206739 23214687 Ahy6g0055 6 803728 811884 PCT
Ahy2g0940 2 20264377 20272304 Ahy6g0055 6 803728 811884 PCT