Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g0044 ATGGAAGAAGTTCAAGCAGCTCAACCTCAATCACTCGGGGAACTTCCAGCAGAATATAGCGTCCCGCCGAAAATTGATTCTGAAGTTGAAGTCCTTCACGAGAAGGTCACTAAGCAAGTAATTAAGGAAGGCCATGGCCAGAAACCTTCCAAATATTCAACTTGCTTTATTCATTACAGGGGTTGGTCTGAAAGCACCCAGCACAAGTTTGAAGACACGTGGCAAGAACAGCGACCAATTGAGATGGTATTAGGAAAAGAAAAGAAAGAAATGACTGGCTTGGCCATTGGTGTGGCAAACATGAAAGATGGTGAGCGTGCATTGCTACGTGTGGGTTGGGAATTAGGATATGGCGAGGAAGGAAGTTTTTCTTTCCCCAATGTTCCTCCCAGGGCAGATTTAGTTTATGAAGTCGAGCTTATTGGCTTTGATGAAACAAAAGAAGGAAAAGCTCGCAGCGATATGACTGTGGAGGAAAGGATTGGTGCAGCAGATCGTAGAAAGATGGATGGAAATGTTTTGTTTCAGCAAGAAAAACTAGAGGAGGCTATGCAACAGTATGAAATGGCCATAGCATATATGGGAGATGACTTCATGTTTCAGCTGTTTGGGAAATATAGGGATATGGCTTTGGCTGTAAAGAACCCATGCCATCTTAACATGGCAGCTTGTCTGATTAAGCTGAACCGTTATGAAGAAGCTATAGGACAATGTACAATTGTACTGACTGAGGATGAAAACAATGTCAAAGCTCTATTTAGGAGAGGCAAGTCTAGGGCAGCACTTGGGCAAACAGATGCTGCCAAGGAAGATTTTCAAAAGGCACGCAAGTATGCTCCTGAAGACAAAGCCATTGCAAGAGAATTAAGGTTGCTTGCTGAACACGACAAAGTTGTTTATCAAAAGCAGAAAGAACTATACAAAGGAATCTTTGGACCAAGACCAGAACCAAGATCTAGTAATATGCGAAGTGGTAACTTGCTGATTCTCATTTGGCAGTGGTTGCTTTCACTATTTTATGGCCTTGTTAATCTCTTCAAGCGTAAAAGCCCCAAATCTGACTAA 1065 0.4244 MEEVQAAQPQSLGELPAEYSVPPKIDSEVEVLHEKVTKQVIKEGHGQKPSKYSTCFIHYRGWSESTQHKFEDTWQEQRPIEMVLGKEKKEMTGLAIGVANMKDGERALLRVGWELGYGEEGSFSFPNVPPRADLVYEVELIGFDETKEGKARSDMTVEERIGAADRRKMDGNVLFQQEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLIKLNRYEEAIGQCTIVLTEDENNVKALFRRGKSRAALGQTDAAKEDFQKARKYAPEDKAIARELRLLAEHDKVVYQKQKELYKGIFGPRPEPRSSNMRSGNLLILIWQWLLSLFYGLVNLFKRKSPKSD* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g0044 354 Pfam Tetratricopeptide repeat 250 282 IPR013105 -
Ahy6g0044 354 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP42-RELATED 18 312 - -
Ahy6g0044 354 SMART tpr_5 215 248 IPR019734 GO:0005515
Ahy6g0044 354 SMART tpr_5 164 197 IPR019734 GO:0005515
Ahy6g0044 354 SMART tpr_5 249 282 IPR019734 GO:0005515
Ahy6g0044 354 Gene3D Tetratricopeptide repeat domain 146 277 IPR011990 GO:0005515
Ahy6g0044 354 Gene3D - 20 145 IPR046357 GO:0003755
Ahy6g0044 354 SUPERFAMILY TPR-like 156 295 IPR011990 GO:0005515
Ahy6g0044 354 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 18 312 - -
Ahy6g0044 354 SUPERFAMILY FKBP-like 24 150 - -
Ahy6g0044 354 ProSiteProfiles TPR repeat profile. 249 282 IPR019734 GO:0005515
Ahy6g0044 354 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 48 141 IPR001179 GO:0003755
Ahy6g0044 354 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 52 144 IPR001179 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g0044 Ahy-Chr6 699660 703185 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g0044 29 330 Calmodulin-binding Proteins AT5G48570 31.715 3.85e-33 127