Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g0030 ATGGTTGCTGCTACCACTCCTATAGTTGGGTCCCATGTTTGGGTTGAGGATTCTGAAGTAGCATGGATAGATGGTGAAGTCTTGGAGGTTAATGGAGAAGAAGTTAAAGTCTCTTGCACTTCAGGGAAGACGGTTGTTGTTAAAGTGTCCTGTATTTATCATAAAGACACTGAAGTTCCGCCAAGTGGAGTAGACGATATGACAAAGCTTGCATACCTACACGAACCTGGTGTACTAGAAAATCTGAGATCAAGATATGATATCAATGAAATTTACACTTACACTGGAAATATATTGATTGCGGTGAACCCTTTTGTAAAGCTTCCTCATTTATATGATAGTCATATGATGGCACAATATAAAGGAGCAGTGTTTGGTGAGCTAAGTCCACATCCCTTTGCCGTTGCAGATGCTGCATATAGGCTTATGATAAATGAGGGAATCAGCCAGTCAATATTAGTCAGTGGTGAAAGCGGAGCTGGTAAAACAGAAAGTACTAAGTTGCTCATGCGGTATCTTGCCTACATGGGAGGGAGAGCTGCTGCTGAAGGTAGAACTGTTGAGCAAAAAGTCTTGGAGTCCAATCCTGTTCTTGAAGCCTTTGGGAATGCAAAGACGGTTAGGAACAATAATTCAAGTCGTTTTGGTAAGTTTGTGGAGATTCAATTTGATCAGAGGGGAAGAATTTCAGGAGCTGCTATCAGAACATATCTGCTGGAAAGATCGCGTGTTTGTCAGCTATCAGACCCAGAGAGGAATTATCACTGTTTCTACATGCTCTGCGCTGCACCGCAGGAGGAGATTATGAAGTACAAGTTAGGACATCCAAAAACATTTCATTATCTGAATCAATCAAATTGCTATGAGTTAGAAGGGATTGACGAACATAAAGAATATATAGCTACAAGGAGAGCAATGGATGTTGTTGGAATGAGTTTTGAGGAGCAGGATGCAATATTTCGAGTTGTTGCTGCAATTTTGCATCTTGGCAACATTGAGTTCATGAAAGGGAAGGAGATAGATTCATCTGCTCCAAAAGATGAGAAATCTCGGTTCCATCTACAGACTGCAGCTGAGCTTTTCATGTGTGATGCTAAGGCACTTGAAGATTCTCTTTGCAAACGAGTAATTGTTACTCGTGATGAAACAATTACAAAATGGCTGGATCCAGAAGCTGCTGCACTCAGCCGAGATGCTTTGGCTAAGATCGTTTATGCAAGGTTGTTTGACTGGTTGGTTGACAAGATTAATAGTTCAATTGGACAAGATACTGACTCAAAATCCTTAATTGGTGTGCTTGATATTTATGGTTTTGAGAGTTTCAATATCAACAGTTTTGAGCAATTTTGTATTAATTTGACCAATGAAAAGCTTCAGCAACATTTTAATCAGCATGTTTTCAAAATGGAGCAGGAAGAGTACAAGAAGGAGGAGATCGATTGGAGTTACATTGAATTTGTCGACAATCAAGATATTCTAGATCTCATTGAAAAGAAACCTGGTGGCATTATTGCTCTTTTGGATGAAGCTTGCATGTTTCCTAGATCAACACATGAAACTTTTGCTCAAAAGCTGTATCAGACCTTCAAAAACCATAAAAGGTTTAGCAAGCCCAAGTTATCACTTAGTGACTTCACAATTTGCCATTATGCCGGTGATGTCACTTATCAAACTGATTTATTCCTCGACAAGAACAAAGATTATGTTGTAGCTGAACACCAAGCACTTCTTTATGCTTCTAAATGCCCCTTTGTATCGGGTTTGTTTCCACCTTCTCCTGAAGAATCATCCAAACAATCAAAGTTCTCTTCAATTGGTTCACAATTTAAGCAACAATTGCAATCCTTGCTTGAAACTCTCAGTTCCACTGAGCCACATTACATCCGTTGTGTGAAACCCAATAATTTTCTCAAGCCAGCAATTTTTGAGAATAAAAATGTCTTGCTGCAACTCCGTTGTGGGGGAGTTATGGAGGCAATTAGGATTAGCTGTGCTGGGTATCCCACTCGGAAAACCTTTGATGAATTTGTGGATCGATTTGGCCTTCTTGCACCTGATGCTTTGGTCGGAAGCTCCGATGAAGTTCAAGCTTGCAAGAGGATTCTGGAGGATGTTGGACTTGAAGGCTATCAGATTGGTAAAACAAAGGTTTTTCTTCGAGCTGGTCAAATAGCAGAATTAGACACCCGCAGAAGTGAGATCTTAGGACGCTCAGCAAGCATTATTCAGCGGAAAATCCGCTCTTATTTGGCTCGCCAGAGTTTTGTCTCCCTTCGTTTGTCTGCTGTGCAGATACAAGCTGCATGCAGAGGACAACTTTCTCGGCATGTTTACGAGGGAATGCGGCAGCAGGCTTCTAGTTTGGTGATTCAGAGATATTTCCGCATGTATAACGCTAAGAAGGCATATGAAGAATTATATATGTCTGCTGTCTGTATTCAGACTGGTTTGCGGGTAATGGCTGCTCGTTGTGAGCTATGCTTTAGAAGGCGTACTAGAGCAGCGATTATCATTCAGAGCCATTGCAAGAAGTACTTGGCAGAACTTGATTTTATGAAATTAAAGAAGGCAGCAATTGCAACACAATGTGCATGGAGAGGAAAAATGGCGAGGCGAGAACTGCGGAAACTCAAGATGGCTGCAAGAGAAACAGGAGCTCTCCAAGCTGCTAAAAATAAGCTTGAAAAGCAAGTTGAAGACCTTACATTGAGGTTTCAGCTGGAAAAACGTTTGAGGGTTGACATGGAAGAAGCGAAAACACGGGAAAATGAAAAATTACAATCTGCTTTGGATGAGATGCAACTTCAGTTTAAAGAAACTAAAGTACTTCTTGAAAAGGAGCAGGAGGCTGCTAAAAGAGCAATGGAGATTGTACCTGTCATACAGGAGGTTCCAGTTGTTGACCACTCTTTGTTGGAGAAGCTTAGTAGTGAAAATGAAAAACTTAAGAACTTGGTGAATTCACTGGAAAAGAAAATTGATGAAACAGAGAAAAGGTATGAAGAGGCAAACAGAATTGGTGAAGAAAGGTTGAAGCAAGCTTTGGATGCAGAATCAAAAGTAATCCAGCTGAAGACTGCTATGCAAAGGCTTGAAGAGAAATTCTCAGATATCGAATCTGCAAACCATATTCTTCAGAAACAATCTCAGCTAAACTCATCTGTGAAAACAATAGCAGAACACATCGCAACACCTATAGATGAGAAGCTGGAAAATGGTCACCATGTCGTTGAAGAGCATAAAGCTGTTGAAATGTGTGTTACGCCTGTGAAACTATTTGGTACAGATTCTAACAGTAAATTGAGGAGGTCTTACATTGAACGACAACATGAGAATGTTGATTTACTTGTCAACTGTGTTATGAAAAATATTGGCTTCAATAATGAAAAGCCTATTGCTGCTTTTACCATTTACAAATGTCTTCTACACTGGAAATCATTTGAAGCCGAAAGAACTAATGTATTTGATCGCCTTATCCAGATGATTGGTTCTGCAATTGAGGATGAAGATGGAAATAATCTTATGGCCTATTGGTTGTCTAATACCTCTGCGTTATTATTTTTACTCGAACAAAGCCTTAAATCTCATGGTGCATCAACTGCTACCCCAGCTAAAAAACCACCTAATCCAACATCCCTCTTTGGAAGAATGACCAGGAGTTTTCTCTCATCCCCTTCTTCTGCAAACCTTGCCACCCCTGCATCGGAGGTTGTACGCAAGGTAGAGGCTAAATACCCGGCTTTACTTTTCAAGCAGCAGCTCACCGCCTATTTGGAGAAAATATATGGCATCATTCGGGACAACTTGAAGAAGGAGTTAACACCAATGCTTGCATTATGTATCCAGGCACCAAGAACATCAAAAGCAACGTTACGGTCTTCTGGTCGATCCTATGGTAAAGATTCTCCTATGGTTCACTGGCTGACTATTATTGAATCCCTCAACACCCTCCTCTGTACTCTGAAAGAGAACTTTGTGCCTCAAGTTCTTATCCAAAAGATTTTCAGTCAAACATTCTCGTATATTAATGTCCAACTCTTTAATAGTCTTCTTCTGCGCCGTGATTGTTGTACGTTCAGCAATGGGGAATATGTGAAAGCTGGATTAGCTGAATTAGAACTATGGTGCTGTCAGGCCAAGGAAGAGTATGCGGGGTCATCTTGGGATGAGCTCAAGCACATAAGACAGGCTGTTGGATTCTTGGTAATTCATCAGAAGTATAGGATTTCCTATGATGAAATCATTAATGATTTATGCCCTATCCTAAGTATCCAGCAGCTGTATAGAATATGCTCGCTTTACTGGGATGCTAACTACAATACTCGAAGCGTATCTCCTGATGTCCTTTCGAGCATGAGGATGCTTATGGTCGAGGACTCCAATAACGCTCAGAACGATTCTTTCTTGCTGGATGATAGCTCCAGCATTCCTTTCTCAGTGGATGACCTGTCTATATCACTGCAAGAGAAGGATTTCTCAGACATGAAACTGGCAGACGAGCTACTCGAGAATCCAGACTTCCAATTTTTAAATGAGTAG 4539 0.4074 MVAATTPIVGSHVWVEDSEVAWIDGEVLEVNGEEVKVSCTSGKTVVVKVSCIYHKDTEVPPSGVDDMTKLAYLHEPGVLENLRSRYDINEIYTYTGNILIAVNPFVKLPHLYDSHMMAQYKGAVFGELSPHPFAVADAAYRLMINEGISQSILVSGESGAGKTESTKLLMRYLAYMGGRAAAEGRTVEQKVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDQRGRISGAAIRTYLLERSRVCQLSDPERNYHCFYMLCAAPQEEIMKYKLGHPKTFHYLNQSNCYELEGIDEHKEYIATRRAMDVVGMSFEEQDAIFRVVAAILHLGNIEFMKGKEIDSSAPKDEKSRFHLQTAAELFMCDAKALEDSLCKRVIVTRDETITKWLDPEAAALSRDALAKIVYARLFDWLVDKINSSIGQDTDSKSLIGVLDIYGFESFNINSFEQFCINLTNEKLQQHFNQHVFKMEQEEYKKEEIDWSYIEFVDNQDILDLIEKKPGGIIALLDEACMFPRSTHETFAQKLYQTFKNHKRFSKPKLSLSDFTICHYAGDVTYQTDLFLDKNKDYVVAEHQALLYASKCPFVSGLFPPSPEESSKQSKFSSIGSQFKQQLQSLLETLSSTEPHYIRCVKPNNFLKPAIFENKNVLLQLRCGGVMEAIRISCAGYPTRKTFDEFVDRFGLLAPDALVGSSDEVQACKRILEDVGLEGYQIGKTKVFLRAGQIAELDTRRSEILGRSASIIQRKIRSYLARQSFVSLRLSAVQIQAACRGQLSRHVYEGMRQQASSLVIQRYFRMYNAKKAYEELYMSAVCIQTGLRVMAARCELCFRRRTRAAIIIQSHCKKYLAELDFMKLKKAAIATQCAWRGKMARRELRKLKMAARETGALQAAKNKLEKQVEDLTLRFQLEKRLRVDMEEAKTRENEKLQSALDEMQLQFKETKVLLEKEQEAAKRAMEIVPVIQEVPVVDHSLLEKLSSENEKLKNLVNSLEKKIDETEKRYEEANRIGEERLKQALDAESKVIQLKTAMQRLEEKFSDIESANHILQKQSQLNSSVKTIAEHIATPIDEKLENGHHVVEEHKAVEMCVTPVKLFGTDSNSKLRRSYIERQHENVDLLVNCVMKNIGFNNEKPIAAFTIYKCLLHWKSFEAERTNVFDRLIQMIGSAIEDEDGNNLMAYWLSNTSALLFLLEQSLKSHGASTATPAKKPPNPTSLFGRMTRSFLSSPSSANLATPASEVVRKVEAKYPALLFKQQLTAYLEKIYGIIRDNLKKELTPMLALCIQAPRTSKATLRSSGRSYGKDSPMVHWLTIIESLNTLLCTLKENFVPQVLIQKIFSQTFSYINVQLFNSLLLRRDCCTFSNGEYVKAGLAELELWCCQAKEEYAGSSWDELKHIRQAVGFLVIHQKYRISYDEIINDLCPILSIQQLYRICSLYWDANYNTRSVSPDVLSSMRMLMVEDSNNAQNDSFLLDDSSSIPFSVDDLSISLQEKDFSDMKLADELLENPDFQFLNE* 1513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g0030 1512 Coils Coil 972 1006 - -
Ahy6g0030 1512 CDD MYSc_Myo11 76 720 IPR036018 -
Ahy6g0030 1512 ProSiteProfiles IQ motif profile. 783 809 IPR000048 GO:0005515
Ahy6g0030 1512 ProSiteProfiles IQ motif profile. 854 883 IPR000048 GO:0005515
Ahy6g0030 1512 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 8 57 IPR004009 GO:0003774|GO:0005524|GO:0016459
Ahy6g0030 1512 PRINTS Myosin heavy chain signature 482 510 IPR001609 GO:0003774|GO:0005524|GO:0016459
Ahy6g0030 1512 PRINTS Myosin heavy chain signature 149 174 IPR001609 GO:0003774|GO:0005524|GO:0016459
Ahy6g0030 1512 PRINTS Myosin heavy chain signature 92 111 IPR001609 GO:0003774|GO:0005524|GO:0016459
Ahy6g0030 1512 PRINTS Myosin heavy chain signature 196 223 IPR001609 GO:0003774|GO:0005524|GO:0016459
Ahy6g0030 1512 PRINTS Myosin heavy chain signature 429 457 IPR001609 GO:0003774|GO:0005524|GO:0016459
Ahy6g0030 1512 Coils Coil 1014 1048 - -
Ahy6g0030 1512 Pfam IQ calmodulin-binding motif 832 847 IPR000048 GO:0005515
Ahy6g0030 1512 Pfam IQ calmodulin-binding motif 786 803 IPR000048 GO:0005515
Ahy6g0030 1512 Pfam IQ calmodulin-binding motif 856 875 IPR000048 GO:0005515
Ahy6g0030 1512 Pfam IQ calmodulin-binding motif 761 778 IPR000048 GO:0005515
Ahy6g0030 1512 Pfam IQ calmodulin-binding motif 737 755 IPR000048 GO:0005515
Ahy6g0030 1512 Pfam Myosin head (motor domain) 64 720 IPR001609 GO:0003774|GO:0005524|GO:0016459
Ahy6g0030 1512 Gene3D Myosin VI head, motor domain, U50 subdomain 312 601 - -
Ahy6g0030 1512 Pfam Myosin N-terminal SH3-like domain 9 49 IPR004009 GO:0003774|GO:0005524|GO:0016459
Ahy6g0030 1512 ProSiteProfiles IQ motif profile. 737 764 IPR000048 GO:0005515
Ahy6g0030 1512 ProSiteProfiles Dilute domain profile. 1156 1458 IPR002710 -
Ahy6g0030 1512 Gene3D - 666 733 - -
Ahy6g0030 1512 ProSiteProfiles IQ motif profile. 758 787 IPR000048 GO:0005515
Ahy6g0030 1512 PANTHER MYOSIN 7 1510 - -
Ahy6g0030 1512 Gene3D - 439 623 - -
Ahy6g0030 1512 Gene3D - 785 832 - -
Ahy6g0030 1512 Gene3D - 833 882 - -
Ahy6g0030 1512 Gene3D - 735 784 - -
Ahy6g0030 1512 Gene3D Kinesin motor domain 65 662 IPR036961 -
Ahy6g0030 1512 SMART iq_5 782 804 IPR000048 GO:0005515
Ahy6g0030 1512 SMART iq_5 757 779 IPR000048 GO:0005515
Ahy6g0030 1512 SMART iq_5 853 875 IPR000048 GO:0005515
Ahy6g0030 1512 SMART iq_5 830 852 IPR000048 GO:0005515
Ahy6g0030 1512 SMART iq_5 734 756 IPR000048 GO:0005515
Ahy6g0030 1512 Coils Coil 877 950 - -
Ahy6g0030 1512 SMART DIL_2 1333 1440 IPR002710 -
Ahy6g0030 1512 SMART MYSc_2a 56 733 IPR001609 GO:0003774|GO:0005524|GO:0016459
Ahy6g0030 1512 PANTHER MYOSIN-14 7 1510 - -
Ahy6g0030 1512 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 785 883 IPR027417 -
Ahy6g0030 1512 Pfam DIL domain 1334 1437 IPR002710 -
Ahy6g0030 1512 CDD MyosinXI_CBD 1107 1481 IPR037975 GO:0007015
Ahy6g0030 1512 ProSiteProfiles Myosin motor domain profile. 62 732 IPR001609 GO:0003774|GO:0005524|GO:0016459
Ahy6g0030 1512 Gene3D - 252 310 - -
Ahy6g0030 1512 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 34 785 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g0030 Ahy-Chr6 549689 560964 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g0030 1 1511 Myosins gene family AT5G43900 74.059 0.0 2317
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g0030 K10357 - gmx:100795648 2637.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g1451 16 29775799 29787007 Ahy6g0030 6 549689 560964 hybridization
Ahy6g0030 6 549689 560964 Ahy2g0979 2 22628377 22645004 PCT
Ahy12g1077 12 25563057 25579607 Ahy6g0030 6 549689 560964 PCT
Ahy2g0979 2 22628377 22645004 Ahy6g0030 6 549689 560964 PCT