Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g0029 ATGGAGAACTTGTTTCGTCTAGTAGATCACGAGGAGTTTGTGTCAAAGAGGTGTATATGGGTGAACGGACCAGTGATTGTTGGGGCAGGACCCTCTGGCCTTGCAACTGCAGCATGCCTGAGAGAACAAGGGGTACCCTTCGTTGTTCTCGAAAGACAAGACTGCATAGCGTCGTTATGGCAGAAAAGAACCTATGACAGGTTGAAGCTTCACCTTCCTAAACAGTTCTGCCAGCTTCCTAAACTTCCTTTCCCTGAAGATTTCCCAGAATACCCTTCAAAGAAGCAATTCATCCAATACCTTGAGTCCTACGTAAACCACTTCGACATCAACCCTCACTTCAACCAGTGCGTTCACTCAGCCAGGTACGACGACACCAGCGGTTTCTGGAGGGTTAAGACCGCCGAGGTTGAGTATATCTGCAGGTGGCTCGTCGTTGCTACCGGCGAAAATGCCGAGTGCGTCGTGCCGGAGATCGACGGCCTTTCCAGCTTCCAAGGAGAAGTTATCCACGCTTGTGATTACAAGTCAGGGGAAAGCTTTAGGGGAAAGAATGTTCTTGTTGTCGGATGCGGAAATTCCGGCATGGAACTGTCTCTTGATCTTGTTAACCACCAGGCTTCGCCGTCCATGGTTGTTCGCAGCTCGGTTCATGTACTTCCAAGACAGGTTCTTGGGAAATCGACGTTCGAATTGGCGGTTATGATGCTGAAGTGGCTGCCGCTATGGCTGGTGGACAAGATCATGTTGCTATTGGCATGGCTTGTTCTTGGAAACGTGGAGAAGTACGGTCTCAAGAGGCCTTCAATGGGGCCACTGGAGATGAAGAACACAAAGGGGAAAACCCCTGTTTTGGACATTGGAACCTTGGACAAAATCAGATCCGGTGACATCAAAGTTGTGCCGGGAATCAAAAGGTTCAACGGCGGCGGCCAAGTCGAGCTCGTCGACGGCCAGAAGCTCCACGTGGACGCCGTTGTGCTGGCAACCGGATACAGAAGCAATGTCCCCTCTTGGCTTCAAGAAGGGGAATTGTTCTCGAAGAACGGGTACCCAAAGATGCCGTTTCCACATGGATGGAAAGGGAATGGAGGAGTGTATGCTGTAGGGTTCACAAAGAGAGGGCTCTCTGGTGCTTCATCTGATGCTGTGAAAATTGCTCAAGATATTGGAAAAGTGTGGAAAGAAGAGACCAAGCAGAAGCAGCAGCGAACCACCGCTTGCCATAGGCGTTGCATTTCTCAGTTCTAA 1251 0.5028 MENLFRLVDHEEFVSKRCIWVNGPVIVGAGPSGLATAACLREQGVPFVVLERQDCIASLWQKRTYDRLKLHLPKQFCQLPKLPFPEDFPEYPSKKQFIQYLESYVNHFDINPHFNQCVHSARYDDTSGFWRVKTAEVEYICRWLVVATGENAECVVPEIDGLSSFQGEVIHACDYKSGESFRGKNVLVVGCGNSGMELSLDLVNHQASPSMVVRSSVHVLPRQVLGKSTFELAVMMLKWLPLWLVDKIMLLLAWLVLGNVEKYGLKRPSMGPLEMKNTKGKTPVLDIGTLDKIRSGDIKVVPGIKRFNGGGQVELVDGQKLHVDAVVLATGYRSNVPSWLQEGELFSKNGYPKMPFPHGWKGNGGVYAVGFTKRGLSGASSDAVKIAQDIGKVWKEETKQKQQRTTACHRRCISQF* 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g0029 416 Pfam Flavin-binding monooxygenase-like 26 337 IPR020946 GO:0004499|GO:0050660|GO:0050661
Ahy6g0029 416 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 11 414 - -
Ahy6g0029 416 SUPERFAMILY FAD/NAD(P)-binding domain 183 393 IPR036188 -
Ahy6g0029 416 PRINTS FAD-dependent pyridine nucleotide reductase signature 24 43 - -
Ahy6g0029 416 PRINTS FAD-dependent pyridine nucleotide reductase signature 185 203 - -
Ahy6g0029 416 Gene3D - 24 400 IPR036188 -
Ahy6g0029 416 PANTHER INDOLE-3-PYRUVATE MONOOXYGENASE YUCCA3-RELATED 11 414 - -
Ahy6g0029 416 SUPERFAMILY FAD/NAD(P)-binding domain 25 219 IPR036188 -
Ahy6g0029 416 PRINTS Pyridine nucleotide disulphide reductase class-II signature 23 45 - -
Ahy6g0029 416 PRINTS Pyridine nucleotide disulphide reductase class-II signature 181 205 - -
Ahy6g0029 416 PRINTS Pyridine nucleotide disulphide reductase class-II signature 142 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g0029 Ahy-Chr6 506932 508809 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g0029 K11816 - gmx:100819987 754.977
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g1453 16 29897053 29898848 Ahy6g0029 6 506932 508809 hybridization
Ahy6g0029 6 506932 508809 Ahy12g1416 12 68306662 68309442 PCT
Ahy12g1080 12 25824009 25826131 Ahy6g0029 6 506932 508809 PCT
Ahy2g0990 2 22837320 22839017 Ahy6g0029 6 506932 508809 PCT
Ahy9g1304 9 41489322 41496970 Ahy6g0029 6 506932 508809 PCT