Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g0027 ATGAATGGGGTTCAGAACAGAAGAGTTCACAATGTTGAGAAACCTTTCCCTGGCTGCCTGGGAAGAATGGTCAACCTCTTTGATTTGACTGCTGGGGTTTCTGGAAATAGGTTACTCACTGATAAGCCACATCATGATGCTTCTTCACTTTTGAGAAGTCAATCAGATGTGGCAAGGATCACCAATCCTTCTTTTGGTGATCAATTAGAGGATAAGCTGATGGTTTCAGACTCGATGAGAGGATCTTCACAGAAGAGAATCAATGGAACACCCATCAAGATGCTCATAGACCAAGAGATGTCCAAAGAAATTGTTTCCAAGCATAATCCACCTAATGTAGTTGCCAAATTAATGGGGCTTGAAGCCCTCCCACGAGGAGAGCCTAATTTGGCCATGGAGAGAAGCTACAGAGGAGATTATTCTCAACATATGCATGGTCATTCAGGAACACCATTCAGACACTGGCAGCTGGAAGATAGATTTATGGACAAGGAAATGCTTCATGAAGGTCATCCGAGCACAGAACAGATTGCTTACAGAGATATTTATGAAATATGGCTTCAATCACAGAGAATGAACAATGTAAGAGACACGATGCCAAATGGAGAAAAGTGGACTGAAGATGTTAGTGCAAAAAAAATGGCGTTCATACGTCAGAAATTTATAGAAGCAAAACGTCTCTCTACAGATGAGAGACTGCGCCAGTCCAAGGAGTTTGATGAAGCCTTGGAAGTTTTAAGCTCCAATAATGACCTACTAATCCGGTTATTGGATTCTCAAAATCTTTATGAGCTTCAGTCTACTCCGATTGCTGAGACTAAGCGTATTACTGTTCTTAAACCGTCGAAGATGGTTGACCGTGAAAAACCCTGTGCCAAGGGCAAGAATGATAAATATGTTAAGAAACCAACAAATATTGGCCAAGCAGCTGCTTGGGAGAAAACTAGTCCTGTGTATTCTCCAGCCAGCCAGAAAGTTGATGATTTCCCGGTTCAACCTACTCGAATAGTGGTATTGAAACCTAGCTCTGGGAAGACTCATGAGATTAAGGCTGTGCTTTCTCCGACAACTTCATCTCCTCGGAATCTGCACCCTGGAAGTTTATATCACGGTCTTGAAGATTGTGATGCACTAGAGCAAACAACAAATGCAAGCGAAATCGCACAGCAAATACCTGAAAGCCTGAGGAGCCATCAAAGAGATGAAACATTGCATTCTTCAGTATTTTCCAATGGATATATCGGAGATGAAAGTTCATTTTACAAATCAGATAATGAGTATGCTGCAGGAAATTTGAGTGATTTGGAACTTATGTCACCATCTCCAAGGCATTCTTGGGATTACATCAATCGCTGTGGCAGCCCTTTTTCTTCATCATCCTTCAGTCGTGCTTCCTGTTCTCCTGAGTCATCTGTTTGCCGAGAGGCCAAGAAACGACTTTCTGAAAGATGGGCCATGATGGCATCAACTAAAGGTACACAAGAGCAGAGACATCTTCGGAGAAGCTCTACATTAGGTGAGATGCTCGCTCTTTCAGATATGAAGAAAGTTATAATATCTGAGGTTGAGGATATTAACAGAGACCAAGGACCTAGCTACTCTGTTTCTTGCAGTCGTAATATTAGTGAAGAAATATGCATGGATGGATCTCCTAAGAATCTTCCTAGGTCAAAATCTGTCCCTGTATCTTCCACTGTCTATGAAACTGGGCCCAGCACTGAAGTTTGTGATCATGATACTAGAAAAGCACATGTCTCCAAGGAGTTGACAAAGTCAAAGAGTATGAAATCATCATTTAAAGGGAAAGTTACAAATTTCTTTTTGTCAAGAAATAAGAGATCAACCAAGGAGAAGTCTTTTCTATCTCAATCCAAAGAGGAATCTCAGTCAACTCTAACTGATACGTCAGTATCTCCAGTAAATTCACGTGGAGTTAGAGATGGTGAGTCTCAAAGCTTCAACAGCGGTGCCTTTGCCGAGTGTTCTCTTCCAGCTGTATATGAATCATCTGGAAAATCACATTCAGACTCTGATGGACAAGGCGTAATATCTCTCGAGTCCACAGTGGCTGGGACATCAACAGAAAACCAGGATCAGCCTAGTCCAATCTCAGTTTTAGAACCTCCTTTTGAAGATGAGAATGCAGCTCATGGATCCTTAGACTGTATGAAGGGTGGTCAGCTGGGATCACGGCTGCTTATGAAGTCTAATTTAATTGATAAATCACCACCCATAGAATCAATAGCTCGGACCCTGTCATGGGATGACTCTTGTGCAGAGGTAGCAAGTCCCTATCCGTTAAAACCATCATTGGTCTCCCTAGACACCAAGGTGGAGGAACAAGATTGGTTTGTTCTCGTTGATAAACTACTATTGGCAGCTGGACTTGACAATCAAGTGCAGTCCGACTCATTTTACCCAAGATGGCATTCCCTTGACAGTGCTTTGGATCCATCATTGAGGGATAACTACGCCAATCCGGATGACAAGGAGCCTCAGCCTCTCCCTGAAGCCCGGCGAAGGCAGAGGAGATCCAACCAGAAGCTAGTATTTGATTGTGTTAATGTAGCCCTAATGGAGATTACCGGTTATGGATCGGAGAAGTACGTAAGGTTGTGGGGTGGGAATAGTCACTGCATGTTCCCAGTCCTGGAGGGTGCAACTCCTCCATTGGTGGACCTCATTGTGGCCCAGATGAAGGATTTAATATCTGGTGGGATGAGGTCTCTTTGGGGTGACTGTGGGGACAGTAACAGCCTGGTTGTGGAGAGTGTTGTCAGAAAAGAGGTTGTGGGGAATGAGTGGGTTGAGCTTATGGGTCTGGAGATGGATATTTTGGTTAAGGTGGTAGAGGGGAAGTTGCTGGAAGAACTTGTGGAGGATGCTGTGCTTGATTTGACAGGCAGGGCTTGA 2913 0.4353 MNGVQNRRVHNVEKPFPGCLGRMVNLFDLTAGVSGNRLLTDKPHHDASSLLRSQSDVARITNPSFGDQLEDKLMVSDSMRGSSQKRINGTPIKMLIDQEMSKEIVSKHNPPNVVAKLMGLEALPRGEPNLAMERSYRGDYSQHMHGHSGTPFRHWQLEDRFMDKEMLHEGHPSTEQIAYRDIYEIWLQSQRMNNVRDTMPNGEKWTEDVSAKKMAFIRQKFIEAKRLSTDERLRQSKEFDEALEVLSSNNDLLIRLLDSQNLYELQSTPIAETKRITVLKPSKMVDREKPCAKGKNDKYVKKPTNIGQAAAWEKTSPVYSPASQKVDDFPVQPTRIVVLKPSSGKTHEIKAVLSPTTSSPRNLHPGSLYHGLEDCDALEQTTNASEIAQQIPESLRSHQRDETLHSSVFSNGYIGDESSFYKSDNEYAAGNLSDLELMSPSPRHSWDYINRCGSPFSSSSFSRASCSPESSVCREAKKRLSERWAMMASTKGTQEQRHLRRSSTLGEMLALSDMKKVIISEVEDINRDQGPSYSVSCSRNISEEICMDGSPKNLPRSKSVPVSSTVYETGPSTEVCDHDTRKAHVSKELTKSKSMKSSFKGKVTNFFLSRNKRSTKEKSFLSQSKEESQSTLTDTSVSPVNSRGVRDGESQSFNSGAFAECSLPAVYESSGKSHSDSDGQGVISLESTVAGTSTENQDQPSPISVLEPPFEDENAAHGSLDCMKGGQLGSRLLMKSNLIDKSPPIESIARTLSWDDSCAEVASPYPLKPSLVSLDTKVEEQDWFVLVDKLLLAAGLDNQVQSDSFYPRWHSLDSALDPSLRDNYANPDDKEPQPLPEARRRQRRSNQKLVFDCVNVALMEITGYGSEKYVRLWGGNSHCMFPVLEGATPPLVDLIVAQMKDLISGGMRSLWGDCGDSNSLVVESVVRKEVVGNEWVELMGLEMDILVKVVEGKLLEELVEDAVLDLTGRA* 971
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g0027 970 MobiDBLite consensus disorder prediction 819 843 - -
Ahy6g0027 970 MobiDBLite consensus disorder prediction 624 653 - -
Ahy6g0027 970 Pfam Protein of unknown function (DUF3741) 218 261 IPR022212 -
Ahy6g0027 970 MobiDBLite consensus disorder prediction 823 843 - -
Ahy6g0027 970 Pfam Domain of unknown function (DUF4378) 784 961 IPR025486 -
Ahy6g0027 970 PANTHER M REDUCTASE II SUBUNIT GAMMA, PUTATIVE (DUF3741)-RELATED 1 969 - -
Ahy6g0027 970 MobiDBLite consensus disorder prediction 556 571 - -
Ahy6g0027 970 MobiDBLite consensus disorder prediction 617 653 - -
Ahy6g0027 970 MobiDBLite consensus disorder prediction 548 575 - -
Ahy6g0027 970 Pfam DUF761-associated sequence motif 110 124 IPR032795 -
Ahy6g0027 970 PANTHER M REDUCTASE II SUBUNIT GAMMA, PUTATIVE (DUF3741)-RELATED 1 969 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g0027 Ahy-Chr6 454032 459596 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g0027 1 967 TRM (TON1 Recruiting Motif) Superfamily AT4G28760 43.461 0.0 637
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g0027 - - gmx:100816611 1431
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g1456 16 30024346 30029912 Ahy6g0027 6 454032 459596 hybridization
Ahy6g0027 6 454032 459596 Ahy12g1086 12 26308014 26313101 PCT
Ahy6g0027 6 454032 459596 Ahy2g0996 2 23440264 23445408 PCT
Ahy12g1086 12 26308014 26313101 Ahy6g0027 6 454032 459596 PCT
Ahy2g0996 2 23440264 23445408 Ahy6g0027 6 454032 459596 PCT