Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g0022 ATGACAAGTCGAAATTTATCGACCCAATTAAGAGCTCTTGTCGTAGATGACAACATGATCAACCGAAAGATTCATCAAAAGATGTTGAATGGTTTGGGAGTGGAATGCATGGGAGTAGCAAATGGAAAAGAAGCTGTAGATGTTCATTGTTATGGTCAAAGCTTTGACCTCATTCTTATGGACAAGGATATGCCCATCATGAATGGCATTGAGGCAACAAAAAAGCTTCGGTCAATGGGCATTTGCAGCATGATTGTTGGTGTGTCATCACGTTCAATGGAAGTGGAAATAAGAGAATTTATGGAAGCTGGCTTAAATGATTACCATGAGAAACCATTGACAACTGCTAAGCTTGCTTCCATTATTCATCATATCATCAACACCAAATAA 390 0.3872 MTSRNLSTQLRALVVDDNMINRKIHQKMLNGLGVECMGVANGKEAVDVHCYGQSFDLILMDKDMPIMNGIEATKKLRSMGICSMIVGVSSRSMEVEIREFMEAGLNDYHEKPLTTAKLASIIHHIINTK* 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g0022 129 PANTHER TWO-COMPONENT RESPONSE REGULATOR 24 4 127 - -
Ahy6g0022 129 CDD REC_hyHK_CKI1_RcsC-like 13 122 - -
Ahy6g0022 129 Pfam Response regulator receiver domain 13 122 IPR001789 GO:0000160
Ahy6g0022 129 ProSiteProfiles Response regulatory domain profile. 11 126 IPR001789 GO:0000160
Ahy6g0022 129 SMART REC_2 10 122 IPR001789 GO:0000160
Ahy6g0022 129 SUPERFAMILY CheY-like 9 127 IPR011006 -
Ahy6g0022 129 Gene3D - 5 129 - -
Ahy6g0022 129 PANTHER TWO-COMPONENT RESPONSE REGULATOR 4 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g0022 Ahy-Chr6 398565 400626 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g0022 10 127 Response Regulator Gene Family AT3G04280 48.333 2.52e-32 109
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Ahy6g0022 Response_reg 9.40E-20 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g0022 - - adu:107491646 256.529
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g1460 16 30171373 30173629 Ahy6g0022 6 398565 400626 hybridization