Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy5g3399 TATTCTTTCATTGATCAGACTGCTACAAAGGAGCTAAGCAAGGAAAGTGCTATGGCCATGATAACAGTTACTTCAGAACAACAAAGTCCAGTTTCTGTTCTTGATCTGCAATTTTACAGTGAAGACCCACCTTTTCCAATCAAAAAGAAGACAGAAATCTCAAAAGATTTAGATGAAGCTTTAGCCACTCCTGATAACATAGGGCATGCATTGGACCTTCCTCTTTCATTCAATAACACAAAGGCCAACTTCAGCAATGGAACCAGTGATGATGACCTTCAAACTCAGAATTTGGATAAAGTTCTTTGGCAAAATGACGATAATAGCGAGAAATTCACCAATTGCAGAGAGAGAAAAGATTCTGACCGTAAATACATAGCAGAAATATTGCTCGCATCAGGGCTGCTCAGTAGCCCCAGCTTAATCCAGGCAGTTCATTCACCAGGTCACCTGATAAACCCAAAGTTGTTCTTTGCACTTGAACTATTGAAGACAAACAAGCTGCAGTTCAATATGAAGCACAATGCTGGGAAGATTCTTAGGATAAATAATCTTGAAGAAATGCAAAGAAAACTCATATTTGATGTTGTCAATGAGATTCTAGTACAAAAAATTAGTGCCTTAATATATGTATATTTTGGCTAA 645 0.3752 YSFIDQTATKELSKESAMAMITVTSEQQSPVSVLDLQFYSEDPPFPIKKKTEISKDLDEALATPDNIGHALDLPLSFNNTKANFSNGTSDDDLQTQNLDKVLWQNDDNSEKFTNCRERKDSDRKYIAEILLASGLLSSPSLIQAVHSPGHLINPKLFFALELLKTNKLQFNMKHNAGKILRINNLEEMQRKLIFDVVNEILVQKISALIYVYFG* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy5g3399 214 Pfam Domain of unknown function (DUF4378) 123 206 IPR025486 -
Ahy5g3399 214 PANTHER LONGIFOLIA PROTEIN 5 206 IPR033334 GO:0051513
Ahy5g3399 214 PANTHER LONGIFOLIA PROTEIN 5 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy5g3399 Ahy-Chr5 115805133 115805931 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy5g3399 21 207 TRM (TON1 Recruiting Motif) Superfamily AT5G15580 34.634 7.70e-19 82.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy5g3399 - - ahf:112803159 419.083